RNA–Protein interactions for RNA: ENST00000445357.1

NCLP1-201, Transcript of nucleolin pseudogene 1, humanhuman

BASIC

Gene NCLP1, Length 1,963 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP1-201ENST00000445357 TNFRSF19Q9NS68 423 aa11.31□□□□□ -0.6
NCLP1-201ENST00000445357 IGHV3-48P01763 117 aa11.3□□□□□ -0.6
NCLP1-201ENST00000445357 YPEL3P61236 119 aaPredicted RBP11.3□□□□□ -0.6
NCLP1-201ENST00000445357 TPTE2P1Q5T6R2 138 aa11.3□□□□□ -0.6
NCLP1-201ENST00000445357 OR11H6Q8NGC7 330 aa11.3□□□□□ -0.6
NCLP1-201ENST00000445357 MISP3Q96FF7 219 aa11.3□□□□□ -0.6
NCLP1-201ENST00000445357 IGF2BP2-AS1Q96M15 143 aa11.3□□□□□ -0.6
NCLP1-201ENST00000445357 SRSF8Q9BRL6 282 aaKnown RBP11.3□□□□□ -0.6
NCLP1-201ENST00000445357 PAXXQ9BUH6 204 aa11.3□□□□□ -0.6
NCLP1-201ENST00000445357 ONECUT1Q9UBC0 465 aa11.3□□□□□ -0.6
NCLP1-201ENST00000445357 F11RQ9Y624 299 aaKnown RBP11.3□□□□□ -0.6
NCLP1-201ENST00000445357 V9GYV3 84 aa11.3□□□□□ -0.6
NCLP1-201ENST00000445357 TIGITQ495A1 244 aa11.3□□□□□ -0.6
NCLP1-201ENST00000445357 PACRGQ96M98 296 aaPredicted RBP11.3□□□□□ -0.6
NCLP1-201ENST00000445357 OSTCQ9NRP0 149 aa11.3□□□□□ -0.6
NCLP1-201ENST00000445357 TRAPPC1Q9Y5R8 145 aa11.3□□□□□ -0.6
NCLP1-201ENST00000445357 M0R1W7 72 aa11.29□□□□□ -0.6
NCLP1-201ENST00000445357 GCGP01275 180 aa11.29□□□□□ -0.6
NCLP1-201ENST00000445357 CNN1P51911 297 aaKnown RBP11.29□□□□□ -0.6
NCLP1-201ENST00000445357 LDLRAD2Q5SZI1 272 aa11.29□□□□□ -0.6
NCLP1-201ENST00000445357 RUSC1-AS1Q66K80 236 aa11.29□□□□□ -0.6
NCLP1-201ENST00000445357 DTX2Q86UW9 622 aa11.29□□□□□ -0.6
NCLP1-201ENST00000445357 FXYD5Q96DB9 178 aa11.29□□□□□ -0.6
NCLP1-201ENST00000445357 PERPQ96FX8 193 aa11.29□□□□□ -0.6
NCLP1-201ENST00000445357 BBC3Q96PG8 261 aaPredicted RBP11.29□□□□□ -0.6
NCLP1-201ENST00000445357 FBXL15Q9H469 300 aa11.29□□□□□ -0.6
NCLP1-201ENST00000445357 DMRT1Q9Y5R6 373 aa11.29□□□□□ -0.6
NCLP1-201ENST00000445357 KALRNO60229 2985 aa11.29□□□□□ -0.6
NCLP1-201ENST00000445357 SLC17A3O00476 420 aa11.28□□□□□ -0.6
NCLP1-201ENST00000445357 LY6HO94772 140 aa11.28□□□□□ -0.6
NCLP1-201ENST00000445357 MOSP00540 346 aa11.28□□□□□ -0.6
NCLP1-201ENST00000445357 IGLV2-8P01709 118 aa11.28□□□□□ -0.6
NCLP1-201ENST00000445357 AMBPP02760 352 aa11.28□□□□□ -0.6
NCLP1-201ENST00000445357 PYYP10082 97 aa11.28□□□□□ -0.6
NCLP1-201ENST00000445357 LGALS4P56470 323 aa11.28□□□□□ -0.6
NCLP1-201ENST00000445357 TAS2R60P59551 318 aa11.28□□□□□ -0.6
NCLP1-201ENST00000445357 PLP1P60201 277 aa11.28□□□□□ -0.6
NCLP1-201ENST00000445357 ERVFC1-1P60608 527 aa11.28□□□□□ -0.6
NCLP1-201ENST00000445357 STXBP6Q8NFX7 210 aa11.28□□□□□ -0.6
NCLP1-201ENST00000445357 SRSF12Q8WXF0 261 aaKnown RBP11.28□□□□□ -0.6
NCLP1-201ENST00000445357 CDC42EP3Q9UKI2 254 aa11.28□□□□□ -0.6
NCLP1-201ENST00000445357 LINC00587B1AMM8 73 aa11.28□□□□□ -0.6
NCLP1-201ENST00000445357 HTR1DP28221 377 aa11.28□□□□□ -0.6
NCLP1-201ENST00000445357 OR5I1Q13606 314 aa11.28□□□□□ -0.6
NCLP1-201ENST00000445357 RPEL1Q2QD12 228 aa11.28□□□□□ -0.6
NCLP1-201ENST00000445357 LINC00305Q7Z4B0 112 aa11.28□□□□□ -0.6
NCLP1-201ENST00000445357 ZNF329Q86UD4 541 aa11.28□□□□□ -0.6
NCLP1-201ENST00000445357 DPM3Q9P2X0 92 aa11.28□□□□□ -0.6
NCLP1-201ENST00000445357 ODF3BA8MYP8 253 aa11.27□□□□□ -0.61
NCLP1-201ENST00000445357 ISLRO14498 428 aa11.27□□□□□ -0.61
NCLP1-201ENST00000445357 TIMM23O14925 209 aa11.27□□□□□ -0.61
NCLP1-201ENST00000445357 MYCNOSP40205 109 aa11.27□□□□□ -0.61
NCLP1-201ENST00000445357 C19orf35Q6ZS72 473 aa11.27□□□□□ -0.61
NCLP1-201ENST00000445357 CFHR4Q92496 578 aa11.27□□□□□ -0.61
NCLP1-201ENST00000445357 SSBP3Q9BWW4 388 aaPredicted RBP11.27□□□□□ -0.61
NCLP1-201ENST00000445357 ATRXP46100 2492 aa11.27□□□□□ -0.61
NCLP1-201ENST00000445357 LOC105371242A0A075B767 164 aa11.27□□□□□ -0.61
NCLP1-201ENST00000445357 HIST1H1BP16401 226 aaKnown RBP11.27□□□□□ -0.61
NCLP1-201ENST00000445357 PRTN3P24158 256 aa11.27□□□□□ -0.61
NCLP1-201ENST00000445357 CEACAM3P40198 252 aa11.27□□□□□ -0.61
NCLP1-201ENST00000445357 ARF6P62330 175 aa11.27□□□□□ -0.61
NCLP1-201ENST00000445357 CDPF1Q6NVV7 123 aa11.27□□□□□ -0.61
NCLP1-201ENST00000445357 ARHGAP32A7KAX9 2087 aa11.26□□□□□ -0.61
NCLP1-201ENST00000445357 FCN1O00602 326 aa11.26□□□□□ -0.61
NCLP1-201ENST00000445357 NBASA2RRP1 2371 aa11.26□□□□□ -0.61
NCLP1-201ENST00000445357 I3L2K1 104 aa11.25□□□□□ -0.61
NCLP1-201ENST00000445357 PEX7O00628 323 aa11.25□□□□□ -0.61
NCLP1-201ENST00000445357 HYPMO75409 117 aa11.25□□□□□ -0.61
NCLP1-201ENST00000445357 NDUFA3O95167 84 aa11.25□□□□□ -0.61
NCLP1-201ENST00000445357 APELAP0DMC3 54 aa11.25□□□□□ -0.61
NCLP1-201ENST00000445357 ORM2P19652 201 aa11.25□□□□□ -0.61
NCLP1-201ENST00000445357 NPBQ8NG41 125 aa11.25□□□□□ -0.61
NCLP1-201ENST00000445357 OR1B1Q8NGR6 318 aa11.25□□□□□ -0.61
NCLP1-201ENST00000445357 TRBV9A0A0B4J1U6 114 aa11.25□□□□□ -0.61
NCLP1-201ENST00000445357 NBR2O15453 112 aa11.25□□□□□ -0.61
NCLP1-201ENST00000445357 PRB1P04280 392 aa11.25□□□□□ -0.61
NCLP1-201ENST00000445357 IGLC1P0CG04 106 aa11.25□□□□□ -0.61
NCLP1-201ENST00000445357 SFTPCP11686 197 aa11.25□□□□□ -0.61
NCLP1-201ENST00000445357 JOSD1Q15040 202 aaPredicted RBP11.25□□□□□ -0.61
NCLP1-201ENST00000445357 PLGLAQ15195 96 aa11.25□□□□□ -0.61
NCLP1-201ENST00000445357 C1orf122Q6ZSJ8 110 aa11.25□□□□□ -0.61
NCLP1-201ENST00000445357 KIR3DL3Q8N743 410 aa11.25□□□□□ -0.61
NCLP1-201ENST00000445357 OR5R1Q8NH85 324 aa11.25□□□□□ -0.61
NCLP1-201ENST00000445357 PRDM13Q9H4Q3 707 aa11.25□□□□□ -0.61
NCLP1-201ENST00000445357 ADMP35318 185 aa11.24□□□□□ -0.61
NCLP1-201ENST00000445357 MMDQ15546 238 aa11.24□□□□□ -0.61
NCLP1-201ENST00000445357 TMEM18Q96B42 140 aa11.24□□□□□ -0.61
NCLP1-201ENST00000445357 RNASE7Q9H1E1 156 aaKnown RBP11.24□□□□□ -0.61
NCLP1-201ENST00000445357 IGHV3-21A0A0B4J1V1 117 aa11.23□□□□□ -0.61
NCLP1-201ENST00000445357 GP9P14770 177 aa11.23□□□□□ -0.61
NCLP1-201ENST00000445357 CBLN1P23435 193 aa11.23□□□□□ -0.61
NCLP1-201ENST00000445357 CX3CL1P78423 397 aa11.23□□□□□ -0.61
NCLP1-201ENST00000445357 RPL19P84098 196 aaKnown RBP11.23□□□□□ -0.61
NCLP1-201ENST00000445357 IBA57Q5T440 356 aaKnown RBP11.23□□□□□ -0.61
NCLP1-201ENST00000445357 FAM231DQ6ZW35 169 aa11.23□□□□□ -0.61
NCLP1-201ENST00000445357 OR8I2Q8N0Y5 310 aa11.23□□□□□ -0.61
NCLP1-201ENST00000445357 GBGT1Q8N5D6 347 aa11.23□□□□□ -0.61
NCLP1-201ENST00000445357 OR1L6Q8NGR2 347 aa11.23□□□□□ -0.61
NCLP1-201ENST00000445357 HIVEP3Q5T1R4 2406 aa11.23□□□□□ -0.61
NCLP1-201ENST00000445357 COL6A6A6NMZ7 2263 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms