RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 ROS1P08922 2347 aa13.33□□□□□ -0.27
SEMA3B-207ENST00000441915 ARFGEF3Q5TH69 2177 aa13.33□□□□□ -0.28
SEMA3B-207ENST00000441915 C16orf97H3BN30 126 aa13.33□□□□□ -0.28
SEMA3B-207ENST00000441915 KRTDAPP60985 99 aa13.33□□□□□ -0.28
SEMA3B-207ENST00000441915 C10orf55Q5SWW7 151 aa13.33□□□□□ -0.28
SEMA3B-207ENST00000441915 FBXL7Q9UJT9 491 aa13.33□□□□□ -0.28
SEMA3B-207ENST00000441915 TTC28Q96AY4 2481 aa13.33□□□□□ -0.28
SEMA3B-207ENST00000441915 BMPR1BO00238 502 aa13.33□□□□□ -0.28
SEMA3B-207ENST00000441915 DIAPH2-AS1Q14236 149 aa13.33□□□□□ -0.28
SEMA3B-207ENST00000441915 CCL17Q92583 94 aa13.33□□□□□ -0.28
SEMA3B-207ENST00000441915 WASHC3Q9Y3C0 194 aa13.33□□□□□ -0.28
SEMA3B-207ENST00000441915 CGB1A6NKQ9 187 aa13.32□□□□□ -0.28
SEMA3B-207ENST00000441915 NDUFB3O43676 98 aa13.32□□□□□ -0.28
SEMA3B-207ENST00000441915 FCN3O75636 299 aa13.32□□□□□ -0.28
SEMA3B-207ENST00000441915 IGHV3-48P01763 117 aa13.32□□□□□ -0.28
SEMA3B-207ENST00000441915 COMPP49747 757 aaPredicted RBP13.32□□□□□ -0.28
SEMA3B-207ENST00000441915 LRRC10Q5BKY1 277 aa13.32□□□□□ -0.28
SEMA3B-207ENST00000441915 RCHY1Q96PM5 261 aa13.32□□□□□ -0.28
SEMA3B-207ENST00000441915 NRN1Q9NPD7 142 aa13.32□□□□□ -0.28
SEMA3B-207ENST00000441915 NAV3Q8IVL0 2385 aa13.32□□□□□ -0.28
SEMA3B-207ENST00000441915 DPRXA6NFQ7 191 aa13.32□□□□□ -0.28
SEMA3B-207ENST00000441915 TMEM178BH3BS89 294 aa13.32□□□□□ -0.28
SEMA3B-207ENST00000441915 K7EM74 188 aa13.32□□□□□ -0.28
SEMA3B-207ENST00000441915 APCSP02743 223 aa13.32□□□□□ -0.28
SEMA3B-207ENST00000441915 PATE2Q6UY27 113 aa13.32□□□□□ -0.28
SEMA3B-207ENST00000441915 LINC00311Q8N616 119 aa13.32□□□□□ -0.28
SEMA3B-207ENST00000441915 SSBP3Q9BWW4 388 aaPredicted RBP13.32□□□□□ -0.28
SEMA3B-207ENST00000441915 A0A1W2PS18 150 aa13.31□□□□□ -0.28
SEMA3B-207ENST00000441915 PEX7O00628 323 aa13.31□□□□□ -0.28
SEMA3B-207ENST00000441915 PMCHP20382 165 aa13.31□□□□□ -0.28
SEMA3B-207ENST00000441915 PTTG1IPP53801 180 aa13.31□□□□□ -0.28
SEMA3B-207ENST00000441915 ETFRF1Q6IPR1 90 aa13.31□□□□□ -0.28
SEMA3B-207ENST00000441915 FAM231DQ6ZW35 169 aa13.31□□□□□ -0.28
SEMA3B-207ENST00000441915 ZNF329Q86UD4 541 aa13.31□□□□□ -0.28
SEMA3B-207ENST00000441915 FAM168AQ92567 244 aa13.31□□□□□ -0.28
SEMA3B-207ENST00000441915 SSUH2Q9Y2M2 353 aa13.31□□□□□ -0.28
SEMA3B-207ENST00000441915 IGKV1D-37A0A075B6S9 117 aa13.31□□□□□ -0.28
SEMA3B-207ENST00000441915 DIRC3C9JPN6 131 aa13.31□□□□□ -0.28
SEMA3B-207ENST00000441915 BSPH1Q075Z2 132 aa13.31□□□□□ -0.28
SEMA3B-207ENST00000441915 VMA21Q3ZAQ7 101 aa13.31□□□□□ -0.28
SEMA3B-207ENST00000441915 LINC00305Q7Z4B0 112 aa13.31□□□□□ -0.28
SEMA3B-207ENST00000441915 C8orf31Q8N9H6 132 aa13.31□□□□□ -0.28
SEMA3B-207ENST00000441915 THAP8Q8NA92 274 aa13.31□□□□□ -0.28
SEMA3B-207ENST00000441915 CUL9Q8IWT3 2517 aa13.3□□□□□ -0.28
SEMA3B-207ENST00000441915 CCL25O15444 150 aa13.3□□□□□ -0.28
SEMA3B-207ENST00000441915 ZNF324O75467 553 aaPredicted RBP13.3□□□□□ -0.28
SEMA3B-207ENST00000441915 IGLV2-23P01705 113 aa13.3□□□□□ -0.28
SEMA3B-207ENST00000441915 RASL11AQ6T310 242 aa13.3□□□□□ -0.28
SEMA3B-207ENST00000441915 OR4B1Q8NGF8 309 aa13.3□□□□□ -0.28
SEMA3B-207ENST00000441915 ZNF596Q8TC21 504 aa13.3□□□□□ -0.28
SEMA3B-207ENST00000441915 ST6GALNAC6Q969X2 333 aa13.3□□□□□ -0.28
SEMA3B-207ENST00000441915 A0A0G2JNJ9 132 aa13.3□□□□□ -0.28
SEMA3B-207ENST00000441915 SLC25A17O43808 307 aa13.3□□□□□ -0.28
SEMA3B-207ENST00000441915 FXYD5Q96DB9 178 aa13.3□□□□□ -0.28
SEMA3B-207ENST00000441915 Q9UFV3 132 aa13.3□□□□□ -0.28
SEMA3B-207ENST00000441915 RNF114Q9Y508 228 aa13.3□□□□□ -0.28
SEMA3B-207ENST00000441915 TRAV34A0A0B4J273 112 aa13.29□□□□□ -0.28
SEMA3B-207ENST00000441915 MC5RP33032 325 aa13.29□□□□□ -0.28
SEMA3B-207ENST00000441915 TBR1Q16650 682 aa13.29□□□□□ -0.28
SEMA3B-207ENST00000441915 LYPD2Q6UXB3 125 aa13.29□□□□□ -0.28
SEMA3B-207ENST00000441915 ASCL5Q7RTU5 278 aa13.29□□□□□ -0.28
SEMA3B-207ENST00000441915 CHRDL1Q9BU40 450 aa13.29□□□□□ -0.28
SEMA3B-207ENST00000441915 PRRG2O14669 202 aa13.29□□□□□ -0.28
SEMA3B-207ENST00000441915 NUDT10Q8NFP7 164 aa13.29□□□□□ -0.28
SEMA3B-207ENST00000441915 STXBP6Q8NFX7 210 aa13.29□□□□□ -0.28
SEMA3B-207ENST00000441915 WIPF2Q8TF74 440 aaPredicted RBP13.29□□□□□ -0.28
SEMA3B-207ENST00000441915 NUDT11Q96G61 164 aa13.29□□□□□ -0.28
SEMA3B-207ENST00000441915 GRAMD2BQ96HH9 432 aa13.29□□□□□ -0.28
SEMA3B-207ENST00000441915 MRPL36Q9P0J6 103 aaKnown RBP13.29□□□□□ -0.28
SEMA3B-207ENST00000441915 A0A1W2PPI3 338 aa13.28□□□□□ -0.28
SEMA3B-207ENST00000441915 K7EP13 123 aa13.28□□□□□ -0.28
SEMA3B-207ENST00000441915 REG1AP05451 166 aa13.28□□□□□ -0.28
SEMA3B-207ENST00000441915 MFAP2P55001 183 aa13.28□□□□□ -0.28
SEMA3B-207ENST00000441915 SLAQ13239 276 aa13.28□□□□□ -0.28
SEMA3B-207ENST00000441915 ASPHD1Q5U4P2 390 aa13.28□□□□□ -0.28
SEMA3B-207ENST00000441915 PRR27Q6MZM9 219 aa13.28□□□□□ -0.28
SEMA3B-207ENST00000441915 MBD6Q96DN6 1003 aa13.28□□□□□ -0.28
SEMA3B-207ENST00000441915 FSTL3O95633 263 aa13.28□□□□□ -0.28
SEMA3B-207ENST00000441915 PLAUP00749 431 aa13.28□□□□□ -0.28
SEMA3B-207ENST00000441915 ZNF137PP52743 207 aa13.28□□□□□ -0.28
SEMA3B-207ENST00000441915 UBE2G1P62253 170 aa13.28□□□□□ -0.28
SEMA3B-207ENST00000441915 NUP35Q8NFH5 326 aa13.28□□□□□ -0.28
SEMA3B-207ENST00000441915 ORAOV1Q8WV07 137 aa13.28□□□□□ -0.28
SEMA3B-207ENST00000441915 VSTM5A8MXK1 200 aa13.27□□□□□ -0.28
SEMA3B-207ENST00000441915 HIST1H1EP10412 219 aaKnown RBP13.27□□□□□ -0.28
SEMA3B-207ENST00000441915 ORM2P19652 201 aa13.27□□□□□ -0.28
SEMA3B-207ENST00000441915 PERPQ96FX8 193 aa13.27□□□□□ -0.28
SEMA3B-207ENST00000441915 TPSG1Q9NRR2 321 aa13.27□□□□□ -0.28
SEMA3B-207ENST00000441915 TNFRSF19Q9NS68 423 aa13.27□□□□□ -0.28
SEMA3B-207ENST00000441915 PLXNB1O43157 2135 aa13.27□□□□□ -0.29
SEMA3B-207ENST00000441915 NDUFB8O95169 186 aa13.27□□□□□ -0.29
SEMA3B-207ENST00000441915 LGALS7P47929 136 aa13.27□□□□□ -0.29
SEMA3B-207ENST00000441915 Q8N976 141 aa13.27□□□□□ -0.29
SEMA3B-207ENST00000441915 TSKUQ8WUA8 353 aa13.27□□□□□ -0.29
SEMA3B-207ENST00000441915 MRPL27Q9P0M9 148 aaKnown RBP13.27□□□□□ -0.29
SEMA3B-207ENST00000441915 CTSZQ9UBR2 303 aa13.27□□□□□ -0.29
SEMA3B-207ENST00000441915 TNFRSF13BO14836 293 aaPredicted RBP13.26□□□□□ -0.29
SEMA3B-207ENST00000441915 ENSAO43768 121 aaKnown RBP13.26□□□□□ -0.29
SEMA3B-207ENST00000441915 MMDQ15546 238 aa13.26□□□□□ -0.29
SEMA3B-207ENST00000441915 OR1B1Q8NGR6 318 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms