RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 ZNF586Q9NXT0 402 aa11.46□□□□□ -0.58
LIMD1-202ENST00000440097 SLC45A2Q9UMX9 530 aa11.46□□□□□ -0.58
LIMD1-202ENST00000440097 PPIAL4CA0A0B4J2A2 164 aa11.45□□□□□ -0.58
LIMD1-202ENST00000440097 H0YJW9 148 aa11.45□□□□□ -0.58
LIMD1-202ENST00000440097 GPX1P07203 203 aa11.45□□□□□ -0.58
LIMD1-202ENST00000440097 PPIAL4GP0DN37 164 aa11.45□□□□□ -0.58
LIMD1-202ENST00000440097 COX7A1P24310 79 aa11.45□□□□□ -0.58
LIMD1-202ENST00000440097 LGALS4P56470 323 aa11.45□□□□□ -0.58
LIMD1-202ENST00000440097 RAB1CQ92928 201 aa11.45□□□□□ -0.58
LIMD1-202ENST00000440097 TMEM133Q9H2Q1 129 aa11.45□□□□□ -0.58
LIMD1-202ENST00000440097 GNB4Q9HAV0 340 aa11.45□□□□□ -0.58
LIMD1-202ENST00000440097 ONECUT1Q9UBC0 465 aa11.45□□□□□ -0.58
LIMD1-202ENST00000440097 WDR83OSQ9Y284 106 aa11.45□□□□□ -0.58
LIMD1-202ENST00000440097 TBL2Q9Y4P3 447 aaKnown RBP11.45□□□□□ -0.58
LIMD1-202ENST00000440097 C20orf202A1L168 122 aa11.45□□□□□ -0.58
LIMD1-202ENST00000440097 OR5G3P0C626 314 aa11.45□□□□□ -0.58
LIMD1-202ENST00000440097 TMEM249Q2WGJ8 235 aa11.45□□□□□ -0.58
LIMD1-202ENST00000440097 OSR1Q8TAX0 266 aaPredicted RBP11.45□□□□□ -0.58
LIMD1-202ENST00000440097 COMMD5Q9GZQ3 224 aa11.45□□□□□ -0.58
LIMD1-202ENST00000440097 UPK2O00526 184 aa11.45□□□□□ -0.58
LIMD1-202ENST00000440097 CCL25O15444 150 aa11.45□□□□□ -0.58
LIMD1-202ENST00000440097 PDLIM3Q53GG5 364 aaPredicted RBP11.45□□□□□ -0.58
LIMD1-202ENST00000440097 OR4C13Q8NGP0 309 aa11.45□□□□□ -0.58
LIMD1-202ENST00000440097 TXN2Q99757 166 aa11.45□□□□□ -0.58
LIMD1-202ENST00000440097 NRN1Q9NPD7 142 aa11.45□□□□□ -0.58
LIMD1-202ENST00000440097 TRAV9-1A0A075B6T8 112 aa11.44□□□□□ -0.58
LIMD1-202ENST00000440097 DLX6P56179 175 aa11.44□□□□□ -0.58
LIMD1-202ENST00000440097 Q6ZN92 141 aa11.44□□□□□ -0.58
LIMD1-202ENST00000440097 CHODLQ9H9P2 273 aa11.44□□□□□ -0.58
LIMD1-202ENST00000440097 UQCR10Q9UDW1 63 aa11.44□□□□□ -0.58
LIMD1-202ENST00000440097 YTHDF2Q9Y5A9 579 aaKnown RBP11.44□□□□□ -0.58
LIMD1-202ENST00000440097 HYPMO75409 117 aa11.44□□□□□ -0.58
LIMD1-202ENST00000440097 CA2P00918 260 aa11.44□□□□□ -0.58
LIMD1-202ENST00000440097 PTTG1IPP53801 180 aa11.44□□□□□ -0.58
LIMD1-202ENST00000440097 RBX1P62877 108 aa11.44□□□□□ -0.58
LIMD1-202ENST00000440097 OR5AN1Q8NGI8 311 aa11.44□□□□□ -0.58
LIMD1-202ENST00000440097 UBTD1Q9HAC8 227 aa11.44□□□□□ -0.58
LIMD1-202ENST00000440097 TRAV34A0A0B4J273 112 aa11.43□□□□□ -0.58
LIMD1-202ENST00000440097 IGLC2P0DOY2 106 aa11.43□□□□□ -0.58
LIMD1-202ENST00000440097 IGLC3P0DOY3 106 aa11.43□□□□□ -0.58
LIMD1-202ENST00000440097 PMCHP20382 165 aa11.43□□□□□ -0.58
LIMD1-202ENST00000440097 AMTP48728 403 aa11.43□□□□□ -0.58
LIMD1-202ENST00000440097 HNRNPA3P51991 378 aaKnown RBP11.43□□□□□ -0.58
LIMD1-202ENST00000440097 POU2AF1Q16633 256 aa11.43□□□□□ -0.58
LIMD1-202ENST00000440097 NABP2Q9BQ15 211 aa11.43□□□□□ -0.58
LIMD1-202ENST00000440097 LAMTOR2Q9Y2Q5 125 aa11.43□□□□□ -0.58
LIMD1-202ENST00000440097 WASHC3Q9Y3C0 194 aa11.43□□□□□ -0.58
LIMD1-202ENST00000440097 ABCA12Q86UK0 2595 aa11.43□□□□□ -0.58
LIMD1-202ENST00000440097 IGHV2-26A0A0B4J1V2 119 aa11.43□□□□□ -0.58
LIMD1-202ENST00000440097 SPINK4O60575 86 aa11.43□□□□□ -0.58
LIMD1-202ENST00000440097 RPEL1Q2QD12 228 aa11.43□□□□□ -0.58
LIMD1-202ENST00000440097 ZNF841Q6ZN19 808 aa11.43□□□□□ -0.58
LIMD1-202ENST00000440097 Q6ZVH6 145 aa11.43□□□□□ -0.58
LIMD1-202ENST00000440097 MMD2Q8IY49 270 aa11.43□□□□□ -0.58
LIMD1-202ENST00000440097 OR8I2Q8N0Y5 310 aa11.43□□□□□ -0.58
LIMD1-202ENST00000440097 CELSR2Q9HCU4 2923 aa11.42□□□□□ -0.58
LIMD1-202ENST00000440097 TEX50A0A1B0GTY4 177 aa11.42□□□□□ -0.58
LIMD1-202ENST00000440097 STAG3L2P0CL84 134 aa11.42□□□□□ -0.58
LIMD1-202ENST00000440097 STAG3L3P0CL85 134 aa11.42□□□□□ -0.58
LIMD1-202ENST00000440097 PRRX1P54821 245 aa11.42□□□□□ -0.58
LIMD1-202ENST00000440097 RPL8P62917 257 aaKnown RBP11.42□□□□□ -0.58
LIMD1-202ENST00000440097 KIAA1644Q3SXP7 199 aa11.42□□□□□ -0.58
LIMD1-202ENST00000440097 TREML4Q6UXN2 200 aa11.42□□□□□ -0.58
LIMD1-202ENST00000440097 PDPNQ86YL7 162 aa11.42□□□□□ -0.58
LIMD1-202ENST00000440097 OR10W1Q8NGF6 305 aa11.42□□□□□ -0.58
LIMD1-202ENST00000440097 SSMEM1Q8WWF3 244 aa11.42□□□□□ -0.58
LIMD1-202ENST00000440097 RCHY1Q96PM5 261 aa11.42□□□□□ -0.58
LIMD1-202ENST00000440097 TXNDC17Q9BRA2 123 aa11.42□□□□□ -0.58
LIMD1-202ENST00000440097 BET1LQ9NYM9 111 aa11.42□□□□□ -0.58
LIMD1-202ENST00000440097 CXorf1O96002 111 aa11.42□□□□□ -0.58
LIMD1-202ENST00000440097 PRCDQ00LT1 54 aa11.42□□□□□ -0.58
LIMD1-202ENST00000440097 MIC13Q5XKP0 118 aa11.42□□□□□ -0.58
LIMD1-202ENST00000440097 LEMD1Q68G75 181 aa11.42□□□□□ -0.58
LIMD1-202ENST00000440097 LINC00311Q8N616 119 aa11.42□□□□□ -0.58
LIMD1-202ENST00000440097 ZNF257Q9Y2Q1 563 aa11.42□□□□□ -0.58
LIMD1-202ENST00000440097 ARHGAP32A7KAX9 2087 aa11.42□□□□□ -0.58
LIMD1-202ENST00000440097 SLC25A17O43808 307 aa11.41□□□□□ -0.58
LIMD1-202ENST00000440097 ZNF253O75346 499 aa11.41□□□□□ -0.58
LIMD1-202ENST00000440097 MOB3BQ86TA1 216 aa11.41□□□□□ -0.58
LIMD1-202ENST00000440097 ORAOV1Q8WV07 137 aa11.41□□□□□ -0.58
LIMD1-202ENST00000440097 WNT10AQ9GZT5 417 aa11.41□□□□□ -0.58
LIMD1-202ENST00000440097 NAT8BQ9UHF3 227 aa11.41□□□□□ -0.58
LIMD1-202ENST00000440097 A0A1W2PS18 150 aa11.41□□□□□ -0.58
LIMD1-202ENST00000440097 OR5B3Q8NH48 314 aa11.41□□□□□ -0.58
LIMD1-202ENST00000440097 VSTM2AQ8TAG5 236 aa11.41□□□□□ -0.58
LIMD1-202ENST00000440097 NEU4Q8WWR8 484 aaPredicted RBP11.41□□□□□ -0.58
LIMD1-202ENST00000440097 ITLN2Q8WWU7 325 aaPredicted RBP11.41□□□□□ -0.58
LIMD1-202ENST00000440097 ST6GALNAC6Q969X2 333 aa11.41□□□□□ -0.58
LIMD1-202ENST00000440097 KCNS1Q96KK3 526 aa11.41□□□□□ -0.58
LIMD1-202ENST00000440097 CLEC7AQ9BXN2 247 aa11.41□□□□□ -0.58
LIMD1-202ENST00000440097 GNB1LQ9BYB4 327 aa11.41□□□□□ -0.58
LIMD1-202ENST00000440097 NPVFQ9HCQ7 196 aa11.41□□□□□ -0.58
LIMD1-202ENST00000440097 INSIG2Q9Y5U4 225 aa11.41□□□□□ -0.58
LIMD1-202ENST00000440097 CELSR1Q9NYQ6 3014 aa11.4□□□□□ -0.58
LIMD1-202ENST00000440097 USF1P22415 310 aaPredicted RBP11.4□□□□□ -0.58
LIMD1-202ENST00000440097 OPRK1P41145 380 aa11.4□□□□□ -0.58
LIMD1-202ENST00000440097 ARF6P62330 175 aa11.4□□□□□ -0.58
LIMD1-202ENST00000440097 TMEM177Q53S58 311 aa11.4□□□□□ -0.58
LIMD1-202ENST00000440097 C8orf31Q8N9H6 132 aa11.4□□□□□ -0.58
LIMD1-202ENST00000440097 C22orf15Q8WYQ4 148 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms