RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 ATF4P18848 351 aaPredicted RBP11.95□□□□□ -0.5
CPSF7-205ENST00000439958 RNF5Q99942 180 aa11.95□□□□□ -0.5
CPSF7-205ENST00000439958 SMIM7Q9BQ49 75 aa11.95□□□□□ -0.5
CPSF7-205ENST00000439958 GNB4Q9HAV0 340 aa11.95□□□□□ -0.5
CPSF7-205ENST00000439958 SLC45A2Q9UMX9 530 aa11.95□□□□□ -0.5
CPSF7-205ENST00000439958 LINC01548A6NM66 108 aa11.94□□□□□ -0.5
CPSF7-205ENST00000439958 VWC2LB2RUY7 222 aa11.94□□□□□ -0.5
CPSF7-205ENST00000439958 SLC25A16P16260 332 aa11.94□□□□□ -0.5
CPSF7-205ENST00000439958 BLNKQ8WV28 456 aa11.94□□□□□ -0.5
CPSF7-205ENST00000439958 H3BQ15 152 aa11.94□□□□□ -0.5
CPSF7-205ENST00000439958 GNG7O60262 68 aa11.94□□□□□ -0.5
CPSF7-205ENST00000439958 RPL29P47914 159 aaKnown RBP11.94□□□□□ -0.5
CPSF7-205ENST00000439958 ADIRFQ15847 76 aa11.94□□□□□ -0.5
CPSF7-205ENST00000439958 KHDC3LQ587J8 217 aa11.94□□□□□ -0.5
CPSF7-205ENST00000439958 OOSP1A8MZH6 123 aa11.94□□□□□ -0.5
CPSF7-205ENST00000439958 DSCR9P59020 149 aa11.94□□□□□ -0.5
CPSF7-205ENST00000439958 ZNF506Q5JVG8 444 aa11.94□□□□□ -0.5
CPSF7-205ENST00000439958 ZNF562Q6V9R5 426 aa11.94□□□□□ -0.5
CPSF7-205ENST00000439958 ATP6V0E1O15342 81 aa11.93□□□□□ -0.5
CPSF7-205ENST00000439958 GPX4P36969 197 aaPredicted RBP11.93□□□□□ -0.5
CPSF7-205ENST00000439958 TAGLN2P37802 199 aaKnown RBP11.93□□□□□ -0.5
CPSF7-205ENST00000439958 TIGITQ495A1 244 aa11.93□□□□□ -0.5
CPSF7-205ENST00000439958 C10orf113Q5VZT2 155 aa11.93□□□□□ -0.5
CPSF7-205ENST00000439958 CENPVQ7Z7K6 275 aaPredicted RBP11.93□□□□□ -0.5
CPSF7-205ENST00000439958 Q8N9W7 124 aa11.93□□□□□ -0.5
CPSF7-205ENST00000439958 LINC01356Q8N9X3 169 aa11.93□□□□□ -0.5
CPSF7-205ENST00000439958 OR5AU1Q8NGC0 362 aa11.93□□□□□ -0.5
CPSF7-205ENST00000439958 UBE2L3P68036 154 aaKnown RBP11.93□□□□□ -0.5
CPSF7-205ENST00000439958 BSXQ3C1V8 233 aa11.93□□□□□ -0.5
CPSF7-205ENST00000439958 MORN5Q5VZ52 161 aa11.93□□□□□ -0.5
CPSF7-205ENST00000439958 IL17RELQ6ZVW7 336 aa11.93□□□□□ -0.5
CPSF7-205ENST00000439958 SCRT1Q9BWW7 348 aa11.93□□□□□ -0.5
CPSF7-205ENST00000439958 C7orf77A4D0Y5 90 aa11.92□□□□□ -0.5
CPSF7-205ENST00000439958 CXorf1O96002 111 aa11.92□□□□□ -0.5
CPSF7-205ENST00000439958 PYYP10082 97 aa11.92□□□□□ -0.5
CPSF7-205ENST00000439958 BCL6BQ8N143 479 aaPredicted RBP11.92□□□□□ -0.5
CPSF7-205ENST00000439958 TMEM37Q8WXS4 190 aa11.92□□□□□ -0.5
CPSF7-205ENST00000439958 DNAJC4Q9NNZ3 241 aa11.92□□□□□ -0.5
CPSF7-205ENST00000439958 DMRT1Q9Y5R6 373 aa11.92□□□□□ -0.5
CPSF7-205ENST00000439958 MXRA5Q9NR99 2828 aa11.92□□□□□ -0.5
CPSF7-205ENST00000439958 IGHV7-81A0A0B4J1V7 117 aa11.92□□□□□ -0.5
CPSF7-205ENST00000439958 ATP5IP56385 69 aaPredicted RBP11.92□□□□□ -0.5
CPSF7-205ENST00000439958 CARHSP1Q9Y2V2 147 aaKnown RBP11.92□□□□□ -0.5
CPSF7-205ENST00000439958 TCRBV4S1A1TA0A5B7 111 aa11.91□□□□□ -0.5
CPSF7-205ENST00000439958 OR2T8A6NH00 312 aa11.91□□□□□ -0.5
CPSF7-205ENST00000439958 MDKP21741 143 aaPredicted RBP11.91□□□□□ -0.5
CPSF7-205ENST00000439958 BPIFB3P59826 476 aa11.91□□□□□ -0.5
CPSF7-205ENST00000439958 LINC00305Q7Z4B0 112 aa11.91□□□□□ -0.5
CPSF7-205ENST00000439958 NPBQ8NG41 125 aa11.91□□□□□ -0.5
CPSF7-205ENST00000439958 NANPQ8TBE9 248 aa11.91□□□□□ -0.5
CPSF7-205ENST00000439958 TRAV1-1A0A0B4J248 108 aa11.91□□□□□ -0.5
CPSF7-205ENST00000439958 CORTO00230 105 aa11.91□□□□□ -0.5
CPSF7-205ENST00000439958 NDUFA3O95167 84 aa11.91□□□□□ -0.5
CPSF7-205ENST00000439958 GCHFRP30047 84 aa11.91□□□□□ -0.5
CPSF7-205ENST00000439958 PRR20EP86478 221 aa11.91□□□□□ -0.5
CPSF7-205ENST00000439958 PRR20CP86479 221 aa11.91□□□□□ -0.5
CPSF7-205ENST00000439958 PRR20DP86480 221 aa11.91□□□□□ -0.5
CPSF7-205ENST00000439958 PRR20BP86481 221 aa11.91□□□□□ -0.5
CPSF7-205ENST00000439958 PRR20AP86496 221 aa11.91□□□□□ -0.5
CPSF7-205ENST00000439958 NDUFB4O95168 129 aa11.91□□□□□ -0.5
CPSF7-205ENST00000439958 CTRB1P17538 263 aa11.91□□□□□ -0.5
CPSF7-205ENST00000439958 CTRB2Q6GPI1 263 aa11.91□□□□□ -0.5
CPSF7-205ENST00000439958 FUT9Q9Y231 359 aa11.91□□□□□ -0.5
CPSF7-205ENST00000439958 CD81P60033 236 aa11.9□□□□□ -0.5
CPSF7-205ENST00000439958 DERL1Q9BUN8 251 aa11.9□□□□□ -0.5
CPSF7-205ENST00000439958 TECRQ9NZ01 308 aaKnown RBP11.9□□□□□ -0.5
CPSF7-205ENST00000439958 FBXL7Q9UJT9 491 aa11.9□□□□□ -0.5
CPSF7-205ENST00000439958 RD3LP0DJH9 198 aa11.9□□□□□ -0.5
CPSF7-205ENST00000439958 PSG1P11464 419 aa11.9□□□□□ -0.5
CPSF7-205ENST00000439958 TAS2R45P59539 299 aa11.9□□□□□ -0.5
CPSF7-205ENST00000439958 TMEM249Q2WGJ8 235 aa11.9□□□□□ -0.5
CPSF7-205ENST00000439958 WFDC11Q8NEX6 87 aa11.9□□□□□ -0.5
CPSF7-205ENST00000439958 PGPEP1LA6NFU8 196 aa11.9□□□□□ -0.51
CPSF7-205ENST00000439958 NOL4LQ96MY1 436 aaPredicted RBP11.9□□□□□ -0.51
CPSF7-205ENST00000439958 STAG3L2P0CL84 134 aa11.89□□□□□ -0.51
CPSF7-205ENST00000439958 STAG3L3P0CL85 134 aa11.89□□□□□ -0.51
CPSF7-205ENST00000439958 HABP2Q14520 560 aaPredicted RBP11.89□□□□□ -0.51
CPSF7-205ENST00000439958 NECAP1Q8NC96 275 aa11.89□□□□□ -0.51
CPSF7-205ENST00000439958 AJUBAQ96IF1 538 aa11.89□□□□□ -0.51
CPSF7-205ENST00000439958 MANBALQ9NQG1 85 aa11.89□□□□□ -0.51
CPSF7-205ENST00000439958 TRAV20A0A0B4J274 112 aa11.89□□□□□ -0.51
CPSF7-205ENST00000439958 IL4P05112 153 aa11.89□□□□□ -0.51
CPSF7-205ENST00000439958 THYN1Q9P016 225 aa11.89□□□□□ -0.51
CPSF7-205ENST00000439958 IGHV3OR16-13A0A075B7E8 117 aa11.89□□□□□ -0.51
CPSF7-205ENST00000439958 IGHV3-74A0A0B4J1X5 117 aa11.89□□□□□ -0.51
CPSF7-205ENST00000439958 NDUFB8O95169 186 aa11.89□□□□□ -0.51
CPSF7-205ENST00000439958 RANP62826 216 aaKnown RBP11.89□□□□□ -0.51
CPSF7-205ENST00000439958 SUMO1P63165 101 aaKnown RBP11.89□□□□□ -0.51
CPSF7-205ENST00000439958 C16orf82Q7Z2V1 217 aa11.89□□□□□ -0.51
CPSF7-205ENST00000439958 SGK494Q96LW2 274 aa11.89□□□□□ -0.51
CPSF7-205ENST00000439958 PARLQ9H300 379 aa11.89□□□□□ -0.51
CPSF7-205ENST00000439958 HYPMO75409 117 aa11.88□□□□□ -0.51
CPSF7-205ENST00000439958 GPR183P32249 361 aa11.88□□□□□ -0.51
CPSF7-205ENST00000439958 BLCAPP62952 87 aa11.88□□□□□ -0.51
CPSF7-205ENST00000439958 LCNL1Q6ZST4 164 aa11.88□□□□□ -0.51
CPSF7-205ENST00000439958 IGKV1D-37A0A075B6S9 117 aa11.88□□□□□ -0.51
CPSF7-205ENST00000439958 SCO2A0A1W2PP80 73 aa11.88□□□□□ -0.51
CPSF7-205ENST00000439958 SEC14L6B5MCN3 397 aa11.88□□□□□ -0.51
CPSF7-205ENST00000439958 C8orf88P0DMB2 117 aa11.88□□□□□ -0.51
CPSF7-205ENST00000439958 TVP23CQ96ET8 276 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms