RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 KLK5Q9Y337 293 aaPredicted RBP13.87□□□□□ -0.19
CCDC78-204ENST00000439619 A0A0B4J2A0 478 aa13.86□□□□□ -0.19
CCDC78-204ENST00000439619 HELTA6NFD8 242 aa13.86□□□□□ -0.19
CCDC78-204ENST00000439619 IFNA10P01566 189 aa13.86□□□□□ -0.19
CCDC78-204ENST00000439619 NPY1RP25929 384 aa13.86□□□□□ -0.19
CCDC78-204ENST00000439619 OR10J1P30954 320 aa13.86□□□□□ -0.19
CCDC78-204ENST00000439619 P2RY1P47900 373 aa13.86□□□□□ -0.19
CCDC78-204ENST00000439619 RND2P52198 227 aa13.86□□□□□ -0.19
CCDC78-204ENST00000439619 DEFB131AP59861 70 aa13.86□□□□□ -0.19
CCDC78-204ENST00000439619 ZNF124Q15973 351 aa13.86□□□□□ -0.19
CCDC78-204ENST00000439619 MLANAQ16655 118 aa13.86□□□□□ -0.19
CCDC78-204ENST00000439619 TIGITQ495A1 244 aa13.86□□□□□ -0.19
CCDC78-204ENST00000439619 STHQ8IWL8 128 aa13.86□□□□□ -0.19
CCDC78-204ENST00000439619 LGI3Q8N145 548 aa13.86□□□□□ -0.19
CCDC78-204ENST00000439619 STXBP6Q8NFX7 210 aa13.86□□□□□ -0.19
CCDC78-204ENST00000439619 RARRES2Q99969 163 aa13.86□□□□□ -0.19
CCDC78-204ENST00000439619 SHPKQ9UHJ6 478 aa13.86□□□□□ -0.19
CCDC78-204ENST00000439619 U3KQ87 197 aa13.86□□□□□ -0.19
CCDC78-204ENST00000439619 DYNC2H1Q8NCM8 4307 aaKnown RBP13.86□□□□□ -0.19
CCDC78-204ENST00000439619 IGKV1-17P01599 117 aa13.85□□□□□ -0.19
CCDC78-204ENST00000439619 AP2S1P53680 142 aaPredicted RBP13.85□□□□□ -0.19
CCDC78-204ENST00000439619 YPEL3P61236 119 aaPredicted RBP13.85□□□□□ -0.19
CCDC78-204ENST00000439619 TMEM187Q14656 261 aa13.85□□□□□ -0.19
CCDC78-204ENST00000439619 SMCO1Q147U7 214 aa13.85□□□□□ -0.19
CCDC78-204ENST00000439619 PRSS54Q6PEW0 395 aa13.85□□□□□ -0.19
CCDC78-204ENST00000439619 MRPL36Q9P0J6 103 aaKnown RBP13.85□□□□□ -0.19
CCDC78-204ENST00000439619 CSMD3Q7Z407 3707 aa13.85□□□□□ -0.19
CCDC78-204ENST00000439619 CCDC160A6NGH7 325 aa13.84□□□□□ -0.19
CCDC78-204ENST00000439619 NXPH3O95157 252 aa13.84□□□□□ -0.19
CCDC78-204ENST00000439619 CA1P00915 261 aaPredicted RBP13.84□□□□□ -0.19
CCDC78-204ENST00000439619 IGLC1P0CG04 106 aa13.84□□□□□ -0.19
CCDC78-204ENST00000439619 S100A5P33763 92 aa13.84□□□□□ -0.19
CCDC78-204ENST00000439619 ATP5IP56385 69 aaPredicted RBP13.84□□□□□ -0.19
CCDC78-204ENST00000439619 PYDC2Q56P42 97 aa13.84□□□□□ -0.19
CCDC78-204ENST00000439619 NMSQ5H8A3 153 aa13.84□□□□□ -0.19
CCDC78-204ENST00000439619 LEMD1Q68G75 181 aa13.84□□□□□ -0.19
CCDC78-204ENST00000439619 CEMP1Q6PRD7 247 aaPredicted RBP13.84□□□□□ -0.19
CCDC78-204ENST00000439619 LILRB2Q8N423 598 aa13.84□□□□□ -0.19
CCDC78-204ENST00000439619 PFDN2Q9UHV9 154 aa13.84□□□□□ -0.19
CCDC78-204ENST00000439619 HNRNPCP07910 306 aaKnown RBP eCLIP13.83□□□□□ -0.2
CCDC78-204ENST00000439619 TMEM41BQ5BJD5 291 aa13.83□□□□□ -0.2
CCDC78-204ENST00000439619 TOMM5Q8N4H5 51 aa13.83□□□□□ -0.2
CCDC78-204ENST00000439619 OR11H2Q8NH07 326 aa13.83□□□□□ -0.2
CCDC78-204ENST00000439619 DTD1Q8TEA8 209 aa13.83□□□□□ -0.2
CCDC78-204ENST00000439619 ACY3Q96HD9 319 aa13.83□□□□□ -0.2
CCDC78-204ENST00000439619 SOSTQ9BQB4 213 aa13.83□□□□□ -0.2
CCDC78-204ENST00000439619 MFFQ9GZY8 342 aa13.83□□□□□ -0.2
CCDC78-204ENST00000439619 RD3LP0DJH9 198 aa13.82□□□□□ -0.2
CCDC78-204ENST00000439619 OR1S1Q8NH92 325 aa13.82□□□□□ -0.2
CCDC78-204ENST00000439619 NPIPB3Q92617 1050 aa13.82□□□□□ -0.2
CCDC78-204ENST00000439619 HSPB7Q9UBY9 170 aa13.82□□□□□ -0.2
CCDC78-204ENST00000439619 DUXBA0A1W2PPF3 345 aa13.81□□□□□ -0.2
CCDC78-204ENST00000439619 K7EQG2 157 aa13.81□□□□□ -0.2
CCDC78-204ENST00000439619 IFNA4P05014 189 aa13.81□□□□□ -0.2
CCDC78-204ENST00000439619 IL4P05112 153 aa13.81□□□□□ -0.2
CCDC78-204ENST00000439619 FABP1P07148 127 aa13.81□□□□□ -0.2
CCDC78-204ENST00000439619 NUP62P37198 522 aaPredicted RBP13.81□□□□□ -0.2
CCDC78-204ENST00000439619 TMEM128Q5BJH2 165 aa13.81□□□□□ -0.2
CCDC78-204ENST00000439619 MORN3Q6PF18 240 aaPredicted RBP13.81□□□□□ -0.2
CCDC78-204ENST00000439619 LYZL2Q7Z4W2 148 aa13.81□□□□□ -0.2
CCDC78-204ENST00000439619 TMED4Q7Z7H5 227 aa13.81□□□□□ -0.2
CCDC78-204ENST00000439619 DEDD2Q8WXF8 326 aa13.81□□□□□ -0.2
CCDC78-204ENST00000439619 PRR13Q9NZ81 148 aa13.81□□□□□ -0.2
CCDC78-204ENST00000439619 LY6G6CO95867 125 aa13.8□□□□□ -0.2
CCDC78-204ENST00000439619 SPP1P10451 314 aa13.8□□□□□ -0.2
CCDC78-204ENST00000439619 EWSR1Q01844 656 aaKnown RBP eCLIP13.8□□□□□ -0.2
CCDC78-204ENST00000439619 DHRS2Q13268 280 aa13.8□□□□□ -0.2
CCDC78-204ENST00000439619 RBMS2Q15434 407 aaKnown RBP13.8□□□□□ -0.2
CCDC78-204ENST00000439619 LINC00476Q8WZB0 136 aa13.8□□□□□ -0.2
CCDC78-204ENST00000439619 SLC25A21Q9BQT8 299 aaPredicted RBP13.8□□□□□ -0.2
CCDC78-204ENST00000439619 C11orf68Q9H3H3 251 aaKnown RBP13.8□□□□□ -0.2
CCDC78-204ENST00000439619 RBKSQ9H477 322 aa13.8□□□□□ -0.2
CCDC78-204ENST00000439619 TOMM40O96008 361 aa13.79□□□□□ -0.2
CCDC78-204ENST00000439619 ZNF688P0C7X2 276 aa13.79□□□□□ -0.2
CCDC78-204ENST00000439619 VAMP1P23763 118 aa13.79□□□□□ -0.2
CCDC78-204ENST00000439619 SNRPD3P62318 126 aaKnown RBP13.79□□□□□ -0.2
CCDC78-204ENST00000439619 SUPT4H1P63272 117 aaKnown RBP13.79□□□□□ -0.2
CCDC78-204ENST00000439619 KLF9Q13886 244 aaPredicted RBP13.79□□□□□ -0.2
CCDC78-204ENST00000439619 C16orf54Q6UWD8 224 aa13.79□□□□□ -0.2
CCDC78-204ENST00000439619 FAM24BQ8N5W8 94 aa13.79□□□□□ -0.2
CCDC78-204ENST00000439619 C11orf45Q8TAV5 145 aa13.79□□□□□ -0.2
CCDC78-204ENST00000439619 U3KQE9 123 aa13.79□□□□□ -0.2
CCDC78-204ENST00000439619 STARD9Q9P2P6 4700 aa13.79□□□□□ -0.2
CCDC78-204ENST00000439619 GPX4P36969 197 aaPredicted RBP13.78□□□□□ -0.2
CCDC78-204ENST00000439619 RAB11AP62491 216 aa13.78□□□□□ -0.2
CCDC78-204ENST00000439619 CENPSQ8N2Z9 138 aa13.78□□□□□ -0.2
CCDC78-204ENST00000439619 DCANP1Q8TF63 244 aa13.78□□□□□ -0.2
CCDC78-204ENST00000439619 PHLDA1Q8WV24 401 aaPredicted RBP13.78□□□□□ -0.2
CCDC78-204ENST00000439619 TMEM170AQ8WVE7 144 aa13.78□□□□□ -0.2
CCDC78-204ENST00000439619 SLC35E1Q96K37 410 aa13.78□□□□□ -0.2
CCDC78-204ENST00000439619 ZFP92A6NM28 416 aa13.77□□□□□ -0.21
CCDC78-204ENST00000439619 MED6O75586 246 aa13.77□□□□□ -0.21
CCDC78-204ENST00000439619 RPP30P78346 268 aaKnown RBP13.77□□□□□ -0.21
CCDC78-204ENST00000439619 OR51G1Q8NGK1 321 aa13.77□□□□□ -0.21
CCDC78-204ENST00000439619 GLMPQ8WWB7 406 aa13.77□□□□□ -0.21
CCDC78-204ENST00000439619 RYR2Q92736 4967 aa13.77□□□□□ -0.21
CCDC78-204ENST00000439619 TRIM63Q969Q1 353 aa13.77□□□□□ -0.21
CCDC78-204ENST00000439619 PSG1P11464 419 aa13.76□□□□□ -0.21
CCDC78-204ENST00000439619 INPP1P49441 399 aa13.76□□□□□ -0.21
CCDC78-204ENST00000439619 NUTF2P61970 127 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms