RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 SIGLEC9Q9Y336 463 aa12.8□□□□□ -0.36
NEDD4-202ENST00000435532 LINC01619G3V211 115 aa12.8□□□□□ -0.36
NEDD4-202ENST00000435532 MALP21145 153 aa12.8□□□□□ -0.36
NEDD4-202ENST00000435532 KLK15Q9H2R5 256 aa12.8□□□□□ -0.36
NEDD4-202ENST00000435532 LEPROTL1O95214 131 aa12.79□□□□□ -0.36
NEDD4-202ENST00000435532 OR4D5Q8NGN0 318 aa12.79□□□□□ -0.36
NEDD4-202ENST00000435532 STAG3L2P0CL84 134 aa12.79□□□□□ -0.36
NEDD4-202ENST00000435532 MUC21Q5SSG8 566 aa12.79□□□□□ -0.36
NEDD4-202ENST00000435532 C9orf139Q6ZV77 190 aa12.79□□□□□ -0.36
NEDD4-202ENST00000435532 C12orf57Q99622 126 aa12.79□□□□□ -0.36
NEDD4-202ENST00000435532 A0A1B0GUT8 65 aa12.79□□□□□ -0.36
NEDD4-202ENST00000435532 CBLN2Q8IUK8 224 aa12.79□□□□□ -0.36
NEDD4-202ENST00000435532 CXorf65A6NEN9 183 aa12.79□□□□□ -0.36
NEDD4-202ENST00000435532 OR10W1Q8NGF6 305 aa12.79□□□□□ -0.36
NEDD4-202ENST00000435532 OR9G4Q8NGQ1 327 aa12.79□□□□□ -0.36
NEDD4-202ENST00000435532 F11RQ9Y624 299 aaKnown RBP12.79□□□□□ -0.36
NEDD4-202ENST00000435532 NAPSAO96009 420 aa12.78□□□□□ -0.36
NEDD4-202ENST00000435532 EFNB1P98172 346 aa12.78□□□□□ -0.36
NEDD4-202ENST00000435532 COQ2Q96H96 371 aa12.78□□□□□ -0.36
NEDD4-202ENST00000435532 PRELID3AQ96N28 172 aa12.78□□□□□ -0.36
NEDD4-202ENST00000435532 TRGV9Q99603 122 aa12.78□□□□□ -0.36
NEDD4-202ENST00000435532 CACNA1IQ9P0X4 2223 aa12.78□□□□□ -0.36
NEDD4-202ENST00000435532 DIRC3C9JPN6 131 aa12.78□□□□□ -0.36
NEDD4-202ENST00000435532 RPL35AP18077 110 aaKnown RBP12.78□□□□□ -0.36
NEDD4-202ENST00000435532 ZNF329Q86UD4 541 aa12.78□□□□□ -0.36
NEDD4-202ENST00000435532 NCOR1P1Q9H4R4 102 aa12.78□□□□□ -0.36
NEDD4-202ENST00000435532 CLDN16Q9Y5I7 305 aa12.78□□□□□ -0.36
NEDD4-202ENST00000435532 EIF3GO75821 320 aaKnown RBP eCLIP12.78□□□□□ -0.36
NEDD4-202ENST00000435532 IGLV1-44P01699 117 aa12.78□□□□□ -0.36
NEDD4-202ENST00000435532 PRB1P04280 392 aa12.78□□□□□ -0.36
NEDD4-202ENST00000435532 OR10J3Q5JRS4 329 aa12.77□□□□□ -0.36
NEDD4-202ENST00000435532 IFT22Q9H7X7 185 aa12.77□□□□□ -0.36
NEDD4-202ENST00000435532 MRAP2Q96G30 205 aa12.77□□□□□ -0.37
NEDD4-202ENST00000435532 EPDR1Q9UM22 224 aa12.77□□□□□ -0.37
NEDD4-202ENST00000435532 Q71RC1 249 aaPredicted RBP12.77□□□□□ -0.37
NEDD4-202ENST00000435532 SPOCK3Q9BQ16 436 aa12.77□□□□□ -0.37
NEDD4-202ENST00000435532 GRIFINA4D1Z8 144 aa12.77□□□□□ -0.37
NEDD4-202ENST00000435532 INSP01308 110 aa12.77□□□□□ -0.37
NEDD4-202ENST00000435532 ARTNQ5T4W7 220 aa12.76□□□□□ -0.37
NEDD4-202ENST00000435532 ZNF415Q09FC8 603 aa12.76□□□□□ -0.37
NEDD4-202ENST00000435532 ERASQ7Z444 233 aa12.76□□□□□ -0.37
NEDD4-202ENST00000435532 ST20Q9HBF5 79 aa12.76□□□□□ -0.37
NEDD4-202ENST00000435532 WDR81Q562E7 1941 aa12.76□□□□□ -0.37
NEDD4-202ENST00000435532 SCO2A0A1W2PP80 73 aa12.76□□□□□ -0.37
NEDD4-202ENST00000435532 PSG8Q9UQ74 426 aa12.76□□□□□ -0.37
NEDD4-202ENST00000435532 A0A087WV48 116 aa12.76□□□□□ -0.37
NEDD4-202ENST00000435532 A0A1W2PRE2 83 aa12.76□□□□□ -0.37
NEDD4-202ENST00000435532 C10orf55Q5SWW7 151 aa12.76□□□□□ -0.37
NEDD4-202ENST00000435532 SRIP30626 198 aa12.75□□□□□ -0.37
NEDD4-202ENST00000435532 FAM110DQ8TAY7 271 aaPredicted RBP12.75□□□□□ -0.37
NEDD4-202ENST00000435532 DAZ1Q9NQZ3 744 aaKnown RBP12.75□□□□□ -0.37
NEDD4-202ENST00000435532 NMBP08949 121 aa12.75□□□□□ -0.37
NEDD4-202ENST00000435532 F8VVB4 439 aa12.75□□□□□ -0.37
NEDD4-202ENST00000435532 F8VWA3 439 aa12.75□□□□□ -0.37
NEDD4-202ENST00000435532 ATP5LO75964 103 aa12.75□□□□□ -0.37
NEDD4-202ENST00000435532 ID3Q02535 119 aa12.75□□□□□ -0.37
NEDD4-202ENST00000435532 Q6ZS49 121 aa12.75□□□□□ -0.37
NEDD4-202ENST00000435532 IL36BQ9NZH7 164 aa12.75□□□□□ -0.37
NEDD4-202ENST00000435532 TEX36Q5VZQ5 186 aa12.75□□□□□ -0.37
NEDD4-202ENST00000435532 AMBPP02760 352 aa12.74□□□□□ -0.37
NEDD4-202ENST00000435532 OR4C5Q8NGB2 326 aa12.74□□□□□ -0.37
NEDD4-202ENST00000435532 RCHY1Q96PM5 261 aa12.74□□□□□ -0.37
NEDD4-202ENST00000435532 CD300CQ08708 224 aa12.74□□□□□ -0.37
NEDD4-202ENST00000435532 JOSD1Q15040 202 aaPredicted RBP12.74□□□□□ -0.37
NEDD4-202ENST00000435532 PMCHL1Q16048 86 aa12.74□□□□□ -0.37
NEDD4-202ENST00000435532 EP300Q09472 2414 aaPredicted RBP12.74□□□□□ -0.37
NEDD4-202ENST00000435532 GBF1Q92538 1859 aa12.74□□□□□ -0.37
NEDD4-202ENST00000435532 FBLN7Q53RD9 439 aa12.74□□□□□ -0.37
NEDD4-202ENST00000435532 IGKV1D-8A0A087WSZ0 117 aa12.73□□□□□ -0.37
NEDD4-202ENST00000435532 WT1P19544 449 aaPredicted RBP12.73□□□□□ -0.37
NEDD4-202ENST00000435532 ACTL10Q5JWF8 245 aa12.73□□□□□ -0.37
NEDD4-202ENST00000435532 ASCL4Q6XD76 172 aa12.73□□□□□ -0.37
NEDD4-202ENST00000435532 VN1R17PQ8TDU5 208 aa12.73□□□□□ -0.37
NEDD4-202ENST00000435532 PRO3102Q9H379 93 aa12.73□□□□□ -0.37
NEDD4-202ENST00000435532 WDR83OSQ9Y284 106 aa12.73□□□□□ -0.37
NEDD4-202ENST00000435532 PSG1P11464 419 aa12.73□□□□□ -0.37
NEDD4-202ENST00000435532 ZNF562Q6V9R5 426 aa12.73□□□□□ -0.37
NEDD4-202ENST00000435532 TMEM136Q6ZRR5 245 aa12.73□□□□□ -0.37
NEDD4-202ENST00000435532 SCGB3A1Q96QR1 104 aa12.73□□□□□ -0.37
NEDD4-202ENST00000435532 TOMM40O96008 361 aa12.73□□□□□ -0.37
NEDD4-202ENST00000435532 FOLR2P14207 255 aa12.73□□□□□ -0.37
NEDD4-202ENST00000435532 LINC00477Q96M19 166 aa12.73□□□□□ -0.37
NEDD4-202ENST00000435532 TRAV9-1A0A075B6T8 112 aa12.73□□□□□ -0.37
NEDD4-202ENST00000435532 GFI1Q99684 422 aa12.73□□□□□ -0.37
NEDD4-202ENST00000435532 PRDM13Q9H4Q3 707 aa12.73□□□□□ -0.37
NEDD4-202ENST00000435532 FHITP49789 147 aa12.73□□□□□ -0.37
NEDD4-202ENST00000435532 SLC25A39Q9BZJ4 359 aaPredicted RBP12.73□□□□□ -0.37
NEDD4-202ENST00000435532 RHPN1-AS1Q9BWJ2 59 aa12.72□□□□□ -0.37
NEDD4-202ENST00000435532 DNAJC13O75165 2243 aa12.72□□□□□ -0.37
NEDD4-202ENST00000435532 IGLV3-9A0A075B6K5 115 aa12.72□□□□□ -0.37
NEDD4-202ENST00000435532 C5orf63A6NC05 138 aa12.72□□□□□ -0.37
NEDD4-202ENST00000435532 ZNF688P0C7X2 276 aa12.72□□□□□ -0.37
NEDD4-202ENST00000435532 ATP5G3P48201 142 aa12.72□□□□□ -0.37
NEDD4-202ENST00000435532 GNG5P63218 68 aa12.72□□□□□ -0.37
NEDD4-202ENST00000435532 LDLRAD4O15165 306 aa12.72□□□□□ -0.37
NEDD4-202ENST00000435532 SYNJ2BPP57105 145 aa12.72□□□□□ -0.37
NEDD4-202ENST00000435532 RPL15P61313 204 aaKnown RBP12.72□□□□□ -0.37
NEDD4-202ENST00000435532 ZNF256Q9Y2P7 627 aaPredicted RBP12.72□□□□□ -0.37
NEDD4-202ENST00000435532 RP1P56715 2156 aa12.72□□□□□ -0.37
NEDD4-202ENST00000435532 F2Z2F3 143 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms