RNA–Protein interactions for RNA: ENST00000431357.1

USP4-205, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 2,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-205ENST00000431357 APCSP02743 223 aa9.13□□□□□ -0.95
USP4-205ENST00000431357 CCL3L1P16619 93 aa9.13□□□□□ -0.95
USP4-205ENST00000431357 MC5RP33032 325 aa9.13□□□□□ -0.95
USP4-205ENST00000431357 ZNF137PP52743 207 aa9.13□□□□□ -0.95
USP4-205ENST00000431357 TCL1AP56279 114 aa9.13□□□□□ -0.95
USP4-205ENST00000431357 LRRC10Q5BKY1 277 aa9.13□□□□□ -0.95
USP4-205ENST00000431357 PRSS57Q6UWY2 283 aa9.13□□□□□ -0.95
USP4-205ENST00000431357 C22orf34Q6ZV56 151 aa9.13□□□□□ -0.95
USP4-205ENST00000431357 ZNF329Q86UD4 541 aa9.13□□□□□ -0.95
USP4-205ENST00000431357 SSUH2Q9Y2M2 353 aa9.13□□□□□ -0.95
USP4-205ENST00000431357 LOC105371242A0A075B767 164 aa9.13□□□□□ -0.95
USP4-205ENST00000431357 TRAV30A0A087WSZ9 112 aa9.13□□□□□ -0.95
USP4-205ENST00000431357 TMEM178BH3BS89 294 aa9.13□□□□□ -0.95
USP4-205ENST00000431357 BMPR1BO00238 502 aa9.13□□□□□ -0.95
USP4-205ENST00000431357 PEX7O00628 323 aa9.13□□□□□ -0.95
USP4-205ENST00000431357 CD33P20138 364 aa9.13□□□□□ -0.95
USP4-205ENST00000431357 CDKN1AP38936 164 aa9.13□□□□□ -0.95
USP4-205ENST00000431357 WT1-ASQ06250 92 aa9.13□□□□□ -0.95
USP4-205ENST00000431357 ADIPOQQ15848 244 aa9.13□□□□□ -0.95
USP4-205ENST00000431357 MRPL54Q6P161 138 aaKnown RBP9.13□□□□□ -0.95
USP4-205ENST00000431357 RBMXL3Q8N7X1 1067 aaKnown RBP9.13□□□□□ -0.95
USP4-205ENST00000431357 NPIPB3Q92617 1050 aa9.13□□□□□ -0.95
USP4-205ENST00000431357 MBD6Q96DN6 1003 aa9.13□□□□□ -0.95
USP4-205ENST00000431357 NRN1Q9NPD7 142 aa9.13□□□□□ -0.95
USP4-205ENST00000431357 MRPL27Q9P0M9 148 aaKnown RBP9.13□□□□□ -0.95
USP4-205ENST00000431357 FBXL7Q9UJT9 491 aa9.13□□□□□ -0.95
USP4-205ENST00000431357 TBL2Q9Y4P3 447 aaKnown RBP9.13□□□□□ -0.95
USP4-205ENST00000431357 DYSFO75923 2080 aa9.12□□□□□ -0.95
USP4-205ENST00000431357 A0A1W2PS18 150 aa9.12□□□□□ -0.95
USP4-205ENST00000431357 CGB1A6NKQ9 187 aa9.12□□□□□ -0.95
USP4-205ENST00000431357 DIRC3C9JPN6 131 aa9.12□□□□□ -0.95
USP4-205ENST00000431357 IGLV2-23P01705 113 aa9.12□□□□□ -0.95
USP4-205ENST00000431357 SRIP30626 198 aa9.12□□□□□ -0.95
USP4-205ENST00000431357 LGALS7P47929 136 aa9.12□□□□□ -0.95
USP4-205ENST00000431357 AMTP48728 403 aa9.12□□□□□ -0.95
USP4-205ENST00000431357 COMPP49747 757 aaPredicted RBP9.12□□□□□ -0.95
USP4-205ENST00000431357 NHLH1Q02575 133 aa9.12□□□□□ -0.95
USP4-205ENST00000431357 TBR1Q16650 682 aa9.12□□□□□ -0.95
USP4-205ENST00000431357 MORN5Q5VZ52 161 aa9.12□□□□□ -0.95
USP4-205ENST00000431357 PATE2Q6UY27 113 aa9.12□□□□□ -0.95
USP4-205ENST00000431357 C19orf35Q6ZS72 473 aa9.12□□□□□ -0.95
USP4-205ENST00000431357 OR4C5Q8NGB2 326 aa9.12□□□□□ -0.95
USP4-205ENST00000431357 ST6GALNAC6Q969X2 333 aa9.12□□□□□ -0.95
USP4-205ENST00000431357 PERPQ96FX8 193 aa9.12□□□□□ -0.95
USP4-205ENST00000431357 FNDC4Q9H6D8 234 aaPredicted RBP9.12□□□□□ -0.95
USP4-205ENST00000431357 SAP30LQ9HAJ7 183 aa9.12□□□□□ -0.95
USP4-205ENST00000431357 IGKV1D-37A0A075B6S9 117 aa9.11□□□□□ -0.95
USP4-205ENST00000431357 E7EUB6 86 aa9.11□□□□□ -0.95
USP4-205ENST00000431357 TNFRSF13BO14836 293 aaPredicted RBP9.11□□□□□ -0.95
USP4-205ENST00000431357 ZNF324O75467 553 aaPredicted RBP9.11□□□□□ -0.95
USP4-205ENST00000431357 REG1BP48304 166 aa9.11□□□□□ -0.95
USP4-205ENST00000431357 KRTDAPP60985 99 aa9.11□□□□□ -0.95
USP4-205ENST00000431357 KIAA1644Q3SXP7 199 aa9.11□□□□□ -0.95
USP4-205ENST00000431357 OCIAD2Q56VL3 154 aa9.11□□□□□ -0.95
USP4-205ENST00000431357 ZCCHC24Q8N2G6 241 aaKnown RBP9.11□□□□□ -0.95
USP4-205ENST00000431357 H1FXQ92522 213 aaKnown RBP9.11□□□□□ -0.95
USP4-205ENST00000431357 FXYD5Q96DB9 178 aa9.11□□□□□ -0.95
USP4-205ENST00000431357 FAM103A1Q9BTL3 118 aaKnown RBP9.11□□□□□ -0.95
USP4-205ENST00000431357 PAM16Q9Y3D7 125 aa9.11□□□□□ -0.95
USP4-205ENST00000431357 DPRXA6NFQ7 191 aa9.11□□□□□ -0.95
USP4-205ENST00000431357 PYYP10082 97 aa9.11□□□□□ -0.95
USP4-205ENST00000431357 HIST1H1EP10412 219 aaKnown RBP9.11□□□□□ -0.95
USP4-205ENST00000431357 SLC35B1P78383 322 aa9.11□□□□□ -0.95
USP4-205ENST00000431357 TDRG1Q3Y452 100 aa9.11□□□□□ -0.95
USP4-205ENST00000431357 PVRIGQ6DKI7 326 aa9.11□□□□□ -0.95
USP4-205ENST00000431357 TCF24Q7RTU0 167 aa9.11□□□□□ -0.95
USP4-205ENST00000431357 WFDC8Q8IUA0 241 aa9.11□□□□□ -0.95
USP4-205ENST00000431357 FSTL3O95633 263 aa9.1□□□□□ -0.95
USP4-205ENST00000431357 CRYGCP07315 174 aa9.1□□□□□ -0.95
USP4-205ENST00000431357 SCGB1A1P11684 91 aa9.1□□□□□ -0.95
USP4-205ENST00000431357 MYCNOSP40205 109 aa9.1□□□□□ -0.95
USP4-205ENST00000431357 PRRX1P54821 245 aa9.1□□□□□ -0.95
USP4-205ENST00000431357 SSBP2P81877 361 aaPredicted RBP9.1□□□□□ -0.95
USP4-205ENST00000431357 LINC00305Q7Z4B0 112 aa9.1□□□□□ -0.95
USP4-205ENST00000431357 ATP5L2Q7Z4Y8 100 aa9.1□□□□□ -0.95
USP4-205ENST00000431357 Q8N976 141 aa9.1□□□□□ -0.95
USP4-205ENST00000431357 TEX45Q8NA69 505 aa9.1□□□□□ -0.95
USP4-205ENST00000431357 KAAG1Q9UBP8 84 aa9.1□□□□□ -0.95
USP4-205ENST00000431357 COX11Q9Y6N1 276 aa9.1□□□□□ -0.95
USP4-205ENST00000431357 CADP27708 2225 aa9.1□□□□□ -0.95
USP4-205ENST00000431357 CELSR3Q9NYQ7 3312 aa9.1□□□□□ -0.95
USP4-205ENST00000431357 PRRG2O14669 202 aa9.1□□□□□ -0.95
USP4-205ENST00000431357 PMCHP20382 165 aa9.1□□□□□ -0.95
USP4-205ENST00000431357 UBE2G1P62253 170 aa9.1□□□□□ -0.95
USP4-205ENST00000431357 KLF5Q13887 457 aaPredicted RBP9.1□□□□□ -0.95
USP4-205ENST00000431357 PET117Q6UWS5 81 aa9.1□□□□□ -0.95
USP4-205ENST00000431357 TSKUQ8WUA8 353 aa9.1□□□□□ -0.95
USP4-205ENST00000431357 LINC00479Q96M42 142 aa9.1□□□□□ -0.95
USP4-205ENST00000431357 TRGV9Q99603 122 aa9.1□□□□□ -0.95
USP4-205ENST00000431357 TNFRSF19Q9NS68 423 aa9.1□□□□□ -0.95
USP4-205ENST00000431357 EPDR1Q9UM22 224 aa9.1□□□□□ -0.95
USP4-205ENST00000431357 A0A0G2JNJ9 132 aa9.09□□□□□ -0.95
USP4-205ENST00000431357 A0A1W2PPI3 338 aa9.09□□□□□ -0.95
USP4-205ENST00000431357 FCN3O75636 299 aa9.09□□□□□ -0.95
USP4-205ENST00000431357 CA7P43166 264 aa9.09□□□□□ -0.95
USP4-205ENST00000431357 MFAP2P55001 183 aa9.09□□□□□ -0.95
USP4-205ENST00000431357 DLX6P56179 175 aa9.09□□□□□ -0.95
USP4-205ENST00000431357 PAX2Q02962 417 aa9.09□□□□□ -0.95
USP4-205ENST00000431357 BSPH1Q075Z2 132 aa9.09□□□□□ -0.95
USP4-205ENST00000431357 TMEM155Q4W5P6 130 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms