RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 SLC25A4P12235 298 aa12.66□□□□□ -0.38
MSH6-203ENST00000420813 TCTAP57738 103 aa12.66□□□□□ -0.38
MSH6-203ENST00000420813 TIGITQ495A1 244 aa12.66□□□□□ -0.38
MSH6-203ENST00000420813 C2orf83Q53S99 150 aa12.66□□□□□ -0.38
MSH6-203ENST00000420813 MORN3Q6PF18 240 aaPredicted RBP12.66□□□□□ -0.38
MSH6-203ENST00000420813 TRPT1Q86TN4 253 aaKnown RBP12.66□□□□□ -0.38
MSH6-203ENST00000420813 OR1S2Q8NGQ3 325 aa12.66□□□□□ -0.38
MSH6-203ENST00000420813 LHFPL5Q8TAF8 219 aa12.66□□□□□ -0.38
MSH6-203ENST00000420813 RNASEH2CQ8TDP1 164 aaKnown RBP12.66□□□□□ -0.38
MSH6-203ENST00000420813 SMIM4Q8WVI0 70 aa12.66□□□□□ -0.38
MSH6-203ENST00000420813 HEYLQ9NQ87 328 aaPredicted RBP12.66□□□□□ -0.38
MSH6-203ENST00000420813 FBXL17Q9UF56 701 aa12.66□□□□□ -0.38
MSH6-203ENST00000420813 U3KQE9 123 aa12.66□□□□□ -0.38
MSH6-203ENST00000420813 DISC1C4P0D8 188 aa12.65□□□□□ -0.38
MSH6-203ENST00000420813 RGS5O15539 181 aa12.65□□□□□ -0.38
MSH6-203ENST00000420813 IGLC1P0CG04 106 aa12.65□□□□□ -0.38
MSH6-203ENST00000420813 EIF2B2P49770 351 aaKnown RBP12.65□□□□□ -0.38
MSH6-203ENST00000420813 FAAP20Q6NZ36 180 aa12.65□□□□□ -0.38
MSH6-203ENST00000420813 SELENOHQ8IZQ5 122 aaKnown RBP12.65□□□□□ -0.38
MSH6-203ENST00000420813 RPP25LQ8N5L8 163 aaKnown RBP12.65□□□□□ -0.38
MSH6-203ENST00000420813 DCANP1Q8TF63 244 aa12.65□□□□□ -0.38
MSH6-203ENST00000420813 HRH4Q9H3N8 390 aa12.65□□□□□ -0.38
MSH6-203ENST00000420813 RABL2AQ9UBK7 228 aaPredicted RBP12.65□□□□□ -0.38
MSH6-203ENST00000420813 CACNG5Q9UF02 275 aa12.65□□□□□ -0.38
MSH6-203ENST00000420813 CACFD1Q9UGQ2 172 aa12.65□□□□□ -0.38
MSH6-203ENST00000420813 RABL2BQ9UNT1 228 aa12.65□□□□□ -0.38
MSH6-203ENST00000420813 HELTA6NFD8 242 aa12.64□□□□□ -0.39
MSH6-203ENST00000420813 CRYM-AS1A6NIL9 109 aa12.64□□□□□ -0.39
MSH6-203ENST00000420813 CTDSPLO15194 276 aa12.64□□□□□ -0.39
MSH6-203ENST00000420813 GIG44P09565 113 aaPredicted RBP12.64□□□□□ -0.39
MSH6-203ENST00000420813 ZNF688P0C7X2 276 aa12.64□□□□□ -0.39
MSH6-203ENST00000420813 YPEL3P61236 119 aaPredicted RBP12.64□□□□□ -0.39
MSH6-203ENST00000420813 TMEM268Q5VZI3 342 aa12.64□□□□□ -0.39
MSH6-203ENST00000420813 PRSS54Q6PEW0 395 aa12.64□□□□□ -0.39
MSH6-203ENST00000420813 LINC00299Q6ZSB3 139 aa12.64□□□□□ -0.39
MSH6-203ENST00000420813 Q8NAQ8 132 aa12.64□□□□□ -0.39
MSH6-203ENST00000420813 SLC24A4Q8NFF2 622 aa12.64□□□□□ -0.39
MSH6-203ENST00000420813 C2CD4CQ8TF44 421 aa12.64□□□□□ -0.39
MSH6-203ENST00000420813 Q8WTZ3 238 aa12.64□□□□□ -0.39
MSH6-203ENST00000420813 GPR146Q96CH1 333 aa12.64□□□□□ -0.39
MSH6-203ENST00000420813 GPR132Q9UNW8 380 aa12.64□□□□□ -0.39
MSH6-203ENST00000420813 CTDSP2O14595 271 aa12.63□□□□□ -0.39
MSH6-203ENST00000420813 DEFB4AO15263 64 aa12.63□□□□□ -0.39
MSH6-203ENST00000420813 AKAIN1P0CW23 69 aa12.63□□□□□ -0.39
MSH6-203ENST00000420813 RND2P52198 227 aa12.63□□□□□ -0.39
MSH6-203ENST00000420813 AP2S1P53680 142 aaPredicted RBP12.63□□□□□ -0.39
MSH6-203ENST00000420813 ETFRF1Q6IPR1 90 aa12.63□□□□□ -0.39
MSH6-203ENST00000420813 NOXA1Q86UR1 476 aa12.63□□□□□ -0.39
MSH6-203ENST00000420813 OR4C16Q8NGL9 310 aa12.63□□□□□ -0.39
MSH6-203ENST00000420813 PRRT1Q99946 306 aa12.63□□□□□ -0.39
MSH6-203ENST00000420813 TMEM56-RWDD3S4R434 201 aa12.63□□□□□ -0.39
MSH6-203ENST00000420813 CEBPZOSA8MTT3 80 aa12.62□□□□□ -0.39
MSH6-203ENST00000420813 ZNF705EA8MWA4 302 aaPredicted RBP12.62□□□□□ -0.39
MSH6-203ENST00000420813 C11orf94C9JXX5 98 aa12.62□□□□□ -0.39
MSH6-203ENST00000420813 DEDDO75618 318 aa12.62□□□□□ -0.39
MSH6-203ENST00000420813 HNRNPCP07910 306 aaKnown RBP eCLIP12.62□□□□□ -0.39
MSH6-203ENST00000420813 MIFP14174 115 aa12.62□□□□□ -0.39
MSH6-203ENST00000420813 OR10J1P30954 320 aa12.62□□□□□ -0.39
MSH6-203ENST00000420813 C16orf54Q6UWD8 224 aa12.62□□□□□ -0.39
MSH6-203ENST00000420813 GLMPQ8WWB7 406 aa12.62□□□□□ -0.39
MSH6-203ENST00000420813 IL22RA2Q969J5 263 aa12.62□□□□□ -0.39
MSH6-203ENST00000420813 C4BPBP20851 252 aa12.61□□□□□ -0.39
MSH6-203ENST00000420813 NPY1RP25929 384 aa12.61□□□□□ -0.39
MSH6-203ENST00000420813 DHRS2Q13268 280 aa12.61□□□□□ -0.39
MSH6-203ENST00000420813 MCFD2Q8NI22 146 aa12.61□□□□□ -0.39
MSH6-203ENST00000420813 TMEM170AQ8WVE7 144 aa12.61□□□□□ -0.39
MSH6-203ENST00000420813 SLIRPQ9GZT3 109 aaKnown RBP12.61□□□□□ -0.39
MSH6-203ENST00000420813 SEPSECSQ9HD40 501 aaKnown RBP12.61□□□□□ -0.39
MSH6-203ENST00000420813 VPS13DQ5THJ4 4388 aa12.6□□□□□ -0.39
MSH6-203ENST00000420813 IGHV4-28A0A0C4DH34 117 aa12.6□□□□□ -0.39
MSH6-203ENST00000420813 KNCNA6PVL3 124 aa12.6□□□□□ -0.39
MSH6-203ENST00000420813 RBMY1A1P0DJD3 496 aaKnown RBP12.6□□□□□ -0.39
MSH6-203ENST00000420813 RBMY1CP0DJD4 496 aa12.6□□□□□ -0.39
MSH6-203ENST00000420813 SULT1A3P0DMM9 295 aa12.6□□□□□ -0.39
MSH6-203ENST00000420813 SULT1A4P0DMN0 295 aa12.6□□□□□ -0.39
MSH6-203ENST00000420813 IL18Q14116 193 aa12.6□□□□□ -0.39
MSH6-203ENST00000420813 RBMY1FQ15415 496 aaKnown RBP12.6□□□□□ -0.39
MSH6-203ENST00000420813 USF2Q15853 346 aaPredicted RBP12.6□□□□□ -0.39
MSH6-203ENST00000420813 NMSQ5H8A3 153 aa12.6□□□□□ -0.39
MSH6-203ENST00000420813 ACTL10Q5JWF8 245 aa12.6□□□□□ -0.39
MSH6-203ENST00000420813 OR51S1Q8NGJ8 323 aa12.6□□□□□ -0.39
MSH6-203ENST00000420813 DIRAS2Q96HU8 199 aa12.6□□□□□ -0.39
MSH6-203ENST00000420813 KCNIP3Q9Y2W7 256 aa12.6□□□□□ -0.39
MSH6-203ENST00000420813 DNAH10Q8IVF4 4471 aa12.6□□□□□ -0.39
MSH6-203ENST00000420813 ANKRD20A5PA0PJZ0 165 aa12.59□□□□□ -0.39
MSH6-203ENST00000420813 GSTZ1O43708 216 aaPredicted RBP12.59□□□□□ -0.39
MSH6-203ENST00000420813 TOMM40O96008 361 aa12.59□□□□□ -0.39
MSH6-203ENST00000420813 IL4P05112 153 aa12.59□□□□□ -0.39
MSH6-203ENST00000420813 SCGB3A2Q96PL1 93 aa12.59□□□□□ -0.39
MSH6-203ENST00000420813 RAB40CQ96S21 281 aa12.59□□□□□ -0.39
MSH6-203ENST00000420813 SCP2D1Q9UJQ7 156 aa12.59□□□□□ -0.39
MSH6-203ENST00000420813 X6R8D5 127 aa12.59□□□□□ -0.39
MSH6-203ENST00000420813 SNRPD3P62318 126 aaKnown RBP12.58□□□□□ -0.4
MSH6-203ENST00000420813 PSMG4Q5JS54 123 aa12.58□□□□□ -0.4
MSH6-203ENST00000420813 CSNK1G2-AS1Q8NCQ2 148 aa12.58□□□□□ -0.4
MSH6-203ENST00000420813 S100ZQ8WXG8 99 aa12.58□□□□□ -0.4
MSH6-203ENST00000420813 NPIPB3Q92617 1050 aa12.58□□□□□ -0.4
MSH6-203ENST00000420813 NRN1Q9NPD7 142 aa12.58□□□□□ -0.4
MSH6-203ENST00000420813 APLNQ9ULZ1 77 aa12.58□□□□□ -0.4
MSH6-203ENST00000420813 U3KQ87 197 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms