RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 OR1S2Q8NGQ3 325 aa15.71■□□□□ 0.11
PTPN4-202ENST00000420482 LHFPL5Q8TAF8 219 aa15.71■□□□□ 0.11
PTPN4-202ENST00000420482 Q8WTZ3 238 aa15.71■□□□□ 0.11
PTPN4-202ENST00000420482 GPR146Q96CH1 333 aa15.71■□□□□ 0.11
PTPN4-202ENST00000420482 MCUBQ9NWR8 336 aa15.71■□□□□ 0.11
PTPN4-202ENST00000420482 ANXA3P12429 323 aa15.7■□□□□ 0.1
PTPN4-202ENST00000420482 DEFB131AP59861 70 aa15.7■□□□□ 0.1
PTPN4-202ENST00000420482 STHQ8IWL8 128 aa15.7■□□□□ 0.1
PTPN4-202ENST00000420482 STXBP6Q8NFX7 210 aa15.7■□□□□ 0.1
PTPN4-202ENST00000420482 FABP12A6NFH5 140 aa15.69■□□□□ 0.1
PTPN4-202ENST00000420482 CA1P00915 261 aaPredicted RBP15.69■□□□□ 0.1
PTPN4-202ENST00000420482 FAUP35544 74 aaKnown RBP15.69■□□□□ 0.1
PTPN4-202ENST00000420482 P2RY1P47900 373 aa15.69■□□□□ 0.1
PTPN4-202ENST00000420482 SRPXP78539 464 aa15.69■□□□□ 0.1
PTPN4-202ENST00000420482 MLANAQ16655 118 aa15.69■□□□□ 0.1
PTPN4-202ENST00000420482 TIGITQ495A1 244 aa15.69■□□□□ 0.1
PTPN4-202ENST00000420482 LINC00476Q8WZB0 136 aa15.69■□□□□ 0.1
PTPN4-202ENST00000420482 MFFQ9GZY8 342 aa15.69■□□□□ 0.1
PTPN4-202ENST00000420482 HELTA6NFD8 242 aa15.68■□□□□ 0.1
PTPN4-202ENST00000420482 IGKV1-17P01599 117 aa15.68■□□□□ 0.1
PTPN4-202ENST00000420482 NPY1RP25929 384 aa15.68■□□□□ 0.1
PTPN4-202ENST00000420482 OR10J1P30954 320 aa15.68■□□□□ 0.1
PTPN4-202ENST00000420482 RND2P52198 227 aa15.68■□□□□ 0.1
PTPN4-202ENST00000420482 AP2S1P53680 142 aaPredicted RBP15.68■□□□□ 0.1
PTPN4-202ENST00000420482 YPEL3P61236 119 aaPredicted RBP15.68■□□□□ 0.1
PTPN4-202ENST00000420482 TMEM187Q14656 261 aa15.68■□□□□ 0.1
PTPN4-202ENST00000420482 TMEM41BQ5BJD5 291 aa15.68■□□□□ 0.1
PTPN4-202ENST00000420482 LILRB2Q8N423 598 aa15.68■□□□□ 0.1
PTPN4-202ENST00000420482 OR11H2Q8NH07 326 aa15.68■□□□□ 0.1
PTPN4-202ENST00000420482 MRPL36Q9P0J6 103 aaKnown RBP15.68■□□□□ 0.1
PTPN4-202ENST00000420482 LY6G6CO95867 125 aa15.67■□□□□ 0.1
PTPN4-202ENST00000420482 CCR6P51684 374 aa15.67■□□□□ 0.1
PTPN4-202ENST00000420482 LEMD1Q68G75 181 aa15.67■□□□□ 0.1
PTPN4-202ENST00000420482 PRSS54Q6PEW0 395 aa15.67■□□□□ 0.1
PTPN4-202ENST00000420482 U3KQ87 197 aa15.67■□□□□ 0.1
PTPN4-202ENST00000420482 A0A0B4J2A0 478 aa15.66■□□□□ 0.1
PTPN4-202ENST00000420482 IFNA10P01566 189 aa15.66■□□□□ 0.1
PTPN4-202ENST00000420482 HNRNPCP07910 306 aaKnown RBP eCLIP15.66■□□□□ 0.1
PTPN4-202ENST00000420482 IGLC1P0CG04 106 aa15.66■□□□□ 0.1
PTPN4-202ENST00000420482 AKR1C4P17516 323 aa15.66■□□□□ 0.1
PTPN4-202ENST00000420482 AP3S2P59780 193 aa15.66■□□□□ 0.1
PTPN4-202ENST00000420482 EWSR1Q01844 656 aaKnown RBP eCLIP15.66■□□□□ 0.1
PTPN4-202ENST00000420482 MCFD2Q8NI22 146 aa15.66■□□□□ 0.1
PTPN4-202ENST00000420482 SLIRPQ9GZT3 109 aaKnown RBP15.66■□□□□ 0.1
PTPN4-202ENST00000420482 C11orf68Q9H3H3 251 aaKnown RBP15.66■□□□□ 0.1
PTPN4-202ENST00000420482 SHPKQ9UHJ6 478 aa15.66■□□□□ 0.1
PTPN4-202ENST00000420482 H3BMQ9 156 aa15.65■□□□□ 0.1
PTPN4-202ENST00000420482 K7EQG2 157 aa15.65■□□□□ 0.1
PTPN4-202ENST00000420482 TNFSF8P32971 234 aa15.65■□□□□ 0.1
PTPN4-202ENST00000420482 ATP5IP56385 69 aaPredicted RBP15.65■□□□□ 0.1
PTPN4-202ENST00000420482 SMCO1Q147U7 214 aa15.65■□□□□ 0.1
PTPN4-202ENST00000420482 NMSQ5H8A3 153 aa15.65■□□□□ 0.1
PTPN4-202ENST00000420482 MORN3Q6PF18 240 aaPredicted RBP15.65■□□□□ 0.1
PTPN4-202ENST00000420482 LGI3Q8N145 548 aa15.65■□□□□ 0.1
PTPN4-202ENST00000420482 PFDN2Q9UHV9 154 aa15.65■□□□□ 0.1
PTPN4-202ENST00000420482 NXPH3O95157 252 aa15.64■□□□□ 0.09
PTPN4-202ENST00000420482 IFNA4P05014 189 aa15.64■□□□□ 0.09
PTPN4-202ENST00000420482 SPP1P10451 314 aa15.64■□□□□ 0.09
PTPN4-202ENST00000420482 C11orf45Q8TAV5 145 aa15.64■□□□□ 0.09
PTPN4-202ENST00000420482 DTD1Q8TEA8 209 aa15.64■□□□□ 0.09
PTPN4-202ENST00000420482 PHLDA1Q8WV24 401 aaPredicted RBP15.64■□□□□ 0.09
PTPN4-202ENST00000420482 ACY3Q96HD9 319 aa15.64■□□□□ 0.09
PTPN4-202ENST00000420482 IL4P05112 153 aa15.63■□□□□ 0.09
PTPN4-202ENST00000420482 RD3LP0DJH9 198 aa15.63■□□□□ 0.09
PTPN4-202ENST00000420482 NUP62P37198 522 aaPredicted RBP15.63■□□□□ 0.09
PTPN4-202ENST00000420482 DHRS2Q13268 280 aa15.63■□□□□ 0.09
PTPN4-202ENST00000420482 RBMS2Q15434 407 aaKnown RBP15.63■□□□□ 0.09
PTPN4-202ENST00000420482 FAM24BQ8N5W8 94 aa15.63■□□□□ 0.09
PTPN4-202ENST00000420482 NPIPB3Q92617 1050 aa15.63■□□□□ 0.09
PTPN4-202ENST00000420482 HSPB7Q9UBY9 170 aa15.63■□□□□ 0.09
PTPN4-202ENST00000420482 TOMM40O96008 361 aa15.62■□□□□ 0.09
PTPN4-202ENST00000420482 ZNF688P0C7X2 276 aa15.62■□□□□ 0.09
PTPN4-202ENST00000420482 C16orf54Q6UWD8 224 aa15.62■□□□□ 0.09
PTPN4-202ENST00000420482 TOMM5Q8N4H5 51 aa15.62■□□□□ 0.09
PTPN4-202ENST00000420482 OR1S1Q8NH92 325 aa15.62■□□□□ 0.09
PTPN4-202ENST00000420482 DCANP1Q8TF63 244 aa15.62■□□□□ 0.09
PTPN4-202ENST00000420482 U3KQE9 123 aa15.62■□□□□ 0.09
PTPN4-202ENST00000420482 DUXBA0A1W2PPF3 345 aa15.61■□□□□ 0.09
PTPN4-202ENST00000420482 FABP1P07148 127 aa15.61■□□□□ 0.09
PTPN4-202ENST00000420482 S100A5P33763 92 aa15.61■□□□□ 0.09
PTPN4-202ENST00000420482 SNRPD3P62318 126 aaKnown RBP15.61■□□□□ 0.09
PTPN4-202ENST00000420482 PYDC2Q56P42 97 aa15.61■□□□□ 0.09
PTPN4-202ENST00000420482 LYZL2Q7Z4W2 148 aa15.61■□□□□ 0.09
PTPN4-202ENST00000420482 CENPSQ8N2Z9 138 aa15.61■□□□□ 0.09
PTPN4-202ENST00000420482 DEDD2Q8WXF8 326 aa15.61■□□□□ 0.09
PTPN4-202ENST00000420482 SOSTQ9BQB4 213 aa15.61■□□□□ 0.09
PTPN4-202ENST00000420482 KLF9Q13886 244 aaPredicted RBP15.6■□□□□ 0.09
PTPN4-202ENST00000420482 TMEM128Q5BJH2 165 aa15.6■□□□□ 0.09
PTPN4-202ENST00000420482 TRPT1Q86TN4 253 aaKnown RBP15.6■□□□□ 0.09
PTPN4-202ENST00000420482 RBKSQ9H477 322 aa15.6■□□□□ 0.09
PTPN4-202ENST00000420482 PRR13Q9NZ81 148 aa15.6■□□□□ 0.09
PTPN4-202ENST00000420482 CCDC160A6NGH7 325 aa15.59■□□□□ 0.09
PTPN4-202ENST00000420482 NUTF2P61970 127 aaKnown RBP15.59■□□□□ 0.09
PTPN4-202ENST00000420482 SUPT4H1P63272 117 aaKnown RBP15.59■□□□□ 0.09
PTPN4-202ENST00000420482 TMED4Q7Z7H5 227 aa15.59■□□□□ 0.09
PTPN4-202ENST00000420482 OR51G1Q8NGK1 321 aa15.59■□□□□ 0.09
PTPN4-202ENST00000420482 TMEM170AQ8WVE7 144 aa15.59■□□□□ 0.09
PTPN4-202ENST00000420482 GLMPQ8WWB7 406 aa15.59■□□□□ 0.09
PTPN4-202ENST00000420482 SLC35E1Q96K37 410 aa15.59■□□□□ 0.09
PTPN4-202ENST00000420482 SEPSECSQ9HD40 501 aaKnown RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms