RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 HELTA6NFD8 242 aa12.56□□□□□ -0.4
PTCD1-202ENST00000419981 HNRNPCP07910 306 aaKnown RBP eCLIP12.56□□□□□ -0.4
PTCD1-202ENST00000419981 IGLC1P0CG04 106 aa12.56□□□□□ -0.4
PTCD1-202ENST00000419981 RND2P52198 227 aa12.56□□□□□ -0.4
PTCD1-202ENST00000419981 MRPS10P82664 201 aaKnown RBP12.56□□□□□ -0.4
PTCD1-202ENST00000419981 DHODHQ02127 395 aa12.56□□□□□ -0.4
PTCD1-202ENST00000419981 DHRS2Q13268 280 aa12.56□□□□□ -0.4
PTCD1-202ENST00000419981 SURF2Q15527 256 aaPredicted RBP12.56□□□□□ -0.4
PTCD1-202ENST00000419981 GPR107Q5VW38 600 aa12.56□□□□□ -0.4
PTCD1-202ENST00000419981 PRSS54Q6PEW0 395 aa12.56□□□□□ -0.4
PTCD1-202ENST00000419981 SLC24A4Q8NFF2 622 aa12.56□□□□□ -0.4
PTCD1-202ENST00000419981 RNASEH2CQ8TDP1 164 aaKnown RBP12.56□□□□□ -0.4
PTCD1-202ENST00000419981 Q8WTZ3 238 aa12.56□□□□□ -0.4
PTCD1-202ENST00000419981 RTBDNQ9BSG5 229 aaPredicted RBP12.56□□□□□ -0.4
PTCD1-202ENST00000419981 MIXL1Q9H2W2 232 aa12.56□□□□□ -0.4
PTCD1-202ENST00000419981 U3KQE9 123 aa12.56□□□□□ -0.4
PTCD1-202ENST00000419981 CEBPZOSA8MTT3 80 aa12.55□□□□□ -0.4
PTCD1-202ENST00000419981 IGLL5B9A064 214 aa12.55□□□□□ -0.4
PTCD1-202ENST00000419981 DISC1C4P0D8 188 aa12.55□□□□□ -0.4
PTCD1-202ENST00000419981 RBMY1A1P0DJD3 496 aaKnown RBP12.55□□□□□ -0.4
PTCD1-202ENST00000419981 RBMY1CP0DJD4 496 aa12.55□□□□□ -0.4
PTCD1-202ENST00000419981 SMIM18P0DKX4 95 aa12.55□□□□□ -0.4
PTCD1-202ENST00000419981 OR10J1P30954 320 aa12.55□□□□□ -0.4
PTCD1-202ENST00000419981 AP2S1P53680 142 aaPredicted RBP12.55□□□□□ -0.4
PTCD1-202ENST00000419981 YPEL3P61236 119 aaPredicted RBP12.55□□□□□ -0.4
PTCD1-202ENST00000419981 RBMY1FQ15415 496 aaKnown RBP12.55□□□□□ -0.4
PTCD1-202ENST00000419981 ACTL10Q5JWF8 245 aa12.55□□□□□ -0.4
PTCD1-202ENST00000419981 TMEM268Q5VZI3 342 aa12.55□□□□□ -0.4
PTCD1-202ENST00000419981 C16orf54Q6UWD8 224 aa12.55□□□□□ -0.4
PTCD1-202ENST00000419981 SELENOHQ8IZQ5 122 aaKnown RBP12.55□□□□□ -0.4
PTCD1-202ENST00000419981 GLMPQ8WWB7 406 aa12.55□□□□□ -0.4
PTCD1-202ENST00000419981 CRYM-AS1A6NIL9 109 aa12.54□□□□□ -0.4
PTCD1-202ENST00000419981 ZNF705EA8MWA4 302 aaPredicted RBP12.54□□□□□ -0.4
PTCD1-202ENST00000419981 PRR20EP86478 221 aa12.54□□□□□ -0.4
PTCD1-202ENST00000419981 PRR20CP86479 221 aa12.54□□□□□ -0.4
PTCD1-202ENST00000419981 PRR20DP86480 221 aa12.54□□□□□ -0.4
PTCD1-202ENST00000419981 PRR20BP86481 221 aa12.54□□□□□ -0.4
PTCD1-202ENST00000419981 PRR20AP86496 221 aa12.54□□□□□ -0.4
PTCD1-202ENST00000419981 PSMG4Q5JS54 123 aa12.54□□□□□ -0.4
PTCD1-202ENST00000419981 ETFRF1Q6IPR1 90 aa12.54□□□□□ -0.4
PTCD1-202ENST00000419981 SMIM4Q8WVI0 70 aa12.54□□□□□ -0.4
PTCD1-202ENST00000419981 GPR146Q96CH1 333 aa12.54□□□□□ -0.4
PTCD1-202ENST00000419981 APLNQ9ULZ1 77 aa12.54□□□□□ -0.4
PTCD1-202ENST00000419981 X6R8D5 127 aa12.54□□□□□ -0.4
PTCD1-202ENST00000419981 NXPH3O95157 252 aa12.53□□□□□ -0.4
PTCD1-202ENST00000419981 IL4P05112 153 aa12.53□□□□□ -0.4
PTCD1-202ENST00000419981 AKAIN1P0CW23 69 aa12.53□□□□□ -0.4
PTCD1-202ENST00000419981 HLA-DMBP28068 263 aa12.53□□□□□ -0.4
PTCD1-202ENST00000419981 CENPSQ8N2Z9 138 aa12.53□□□□□ -0.4
PTCD1-202ENST00000419981 OR4C16Q8NGL9 310 aa12.53□□□□□ -0.4
PTCD1-202ENST00000419981 CLEC5AQ9NY25 188 aa12.53□□□□□ -0.4
PTCD1-202ENST00000419981 TBC1D24Q9ULP9 559 aa12.53□□□□□ -0.4
PTCD1-202ENST00000419981 GPR132Q9UNW8 380 aa12.53□□□□□ -0.4
PTCD1-202ENST00000419981 SULT1A3P0DMM9 295 aa12.52□□□□□ -0.41
PTCD1-202ENST00000419981 SULT1A4P0DMN0 295 aa12.52□□□□□ -0.41
PTCD1-202ENST00000419981 NPY1RP25929 384 aa12.52□□□□□ -0.41
PTCD1-202ENST00000419981 USF2Q15853 346 aaPredicted RBP12.52□□□□□ -0.41
PTCD1-202ENST00000419981 NOXA1Q86UR1 476 aa12.52□□□□□ -0.41
PTCD1-202ENST00000419981 RAB40CQ96S21 281 aa12.52□□□□□ -0.41
PTCD1-202ENST00000419981 PRRT1Q99946 306 aa12.52□□□□□ -0.41
PTCD1-202ENST00000419981 CACFD1Q9UGQ2 172 aa12.52□□□□□ -0.41
PTCD1-202ENST00000419981 TMEM56-RWDD3S4R434 201 aa12.52□□□□□ -0.41
PTCD1-202ENST00000419981 ELOA3CA0A087WX78 387 aaPredicted RBP12.51□□□□□ -0.41
PTCD1-202ENST00000419981 TRAV10A0A0B4J240 114 aa12.51□□□□□ -0.41
PTCD1-202ENST00000419981 CTDSP2O14595 271 aa12.51□□□□□ -0.41
PTCD1-202ENST00000419981 GSTZ1O43708 216 aaPredicted RBP12.51□□□□□ -0.41
PTCD1-202ENST00000419981 TOMM40O96008 361 aa12.51□□□□□ -0.41
PTCD1-202ENST00000419981 SNRPD3P62318 126 aaKnown RBP12.51□□□□□ -0.41
PTCD1-202ENST00000419981 IL18Q14116 193 aa12.51□□□□□ -0.41
PTCD1-202ENST00000419981 Q6ZTC4 211 aa12.51□□□□□ -0.41
PTCD1-202ENST00000419981 CSNK1G2-AS1Q8NCQ2 148 aa12.51□□□□□ -0.41
PTCD1-202ENST00000419981 TMEM170AQ8WVE7 144 aa12.51□□□□□ -0.41
PTCD1-202ENST00000419981 NPIPB3Q92617 1050 aa12.51□□□□□ -0.41
PTCD1-202ENST00000419981 ACY3Q96HD9 319 aa12.51□□□□□ -0.41
PTCD1-202ENST00000419981 FAM90A26D6RGX4 464 aa12.5□□□□□ -0.41
PTCD1-202ENST00000419981 CTDSPLO15194 276 aa12.5□□□□□ -0.41
PTCD1-202ENST00000419981 NUTF2P61970 127 aaKnown RBP12.5□□□□□ -0.41
PTCD1-202ENST00000419981 SPCS2Q15005 226 aa12.5□□□□□ -0.41
PTCD1-202ENST00000419981 NMSQ5H8A3 153 aa12.5□□□□□ -0.41
PTCD1-202ENST00000419981 SIGLEC15Q6ZMC9 328 aa12.5□□□□□ -0.41
PTCD1-202ENST00000419981 GPR141Q7Z602 305 aa12.5□□□□□ -0.41
PTCD1-202ENST00000419981 OR51S1Q8NGJ8 323 aa12.5□□□□□ -0.41
PTCD1-202ENST00000419981 IL22RA2Q969J5 263 aa12.5□□□□□ -0.41
PTCD1-202ENST00000419981 DIRAS2Q96HU8 199 aa12.5□□□□□ -0.41
PTCD1-202ENST00000419981 C1QTNF4Q9BXJ3 329 aa12.5□□□□□ -0.41
PTCD1-202ENST00000419981 SEPSECSQ9HD40 501 aaKnown RBP12.5□□□□□ -0.41
PTCD1-202ENST00000419981 NRN1Q9NPD7 142 aa12.5□□□□□ -0.41
PTCD1-202ENST00000419981 KCNIP3Q9Y2W7 256 aa12.5□□□□□ -0.41
PTCD1-202ENST00000419981 DNAH10Q8IVF4 4471 aa12.5□□□□□ -0.41
PTCD1-202ENST00000419981 DNAH6Q9C0G6 4158 aa12.49□□□□□ -0.41
PTCD1-202ENST00000419981 IGHV4-4A0A075B6R2 117 aa12.49□□□□□ -0.41
PTCD1-202ENST00000419981 BUB3O43684 328 aa12.49□□□□□ -0.41
PTCD1-202ENST00000419981 IFNA10P01566 189 aa12.49□□□□□ -0.41
PTCD1-202ENST00000419981 RD3LP0DJH9 198 aa12.49□□□□□ -0.41
PTCD1-202ENST00000419981 CLVS1Q8IUQ0 354 aaPredicted RBP12.49□□□□□ -0.41
PTCD1-202ENST00000419981 MRPS26Q9BYN8 205 aaKnown RBP12.49□□□□□ -0.41
PTCD1-202ENST00000419981 RABL2AQ9UBK7 228 aaPredicted RBP12.49□□□□□ -0.41
PTCD1-202ENST00000419981 RABL2BQ9UNT1 228 aa12.49□□□□□ -0.41
PTCD1-202ENST00000419981 VPS13DQ5THJ4 4388 aa12.49□□□□□ -0.41
PTCD1-202ENST00000419981 PSG1P11464 419 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms