RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 C1QTNF9P0C862 333 aa6.92□□□□□ -1.3
SPTLC3-201ENST00000399002 TPTE2P1Q5T6R2 138 aa6.92□□□□□ -1.3
SPTLC3-201ENST00000399002 C9orf139Q6ZV77 190 aa6.92□□□□□ -1.3
SPTLC3-201ENST00000399002 PHLDA1Q8WV24 401 aaPredicted RBP6.92□□□□□ -1.3
SPTLC3-201ENST00000399002 PGPEP1Q9NXJ5 209 aa6.92□□□□□ -1.3
SPTLC3-201ENST00000399002 TOMM40O96008 361 aa6.92□□□□□ -1.3
SPTLC3-201ENST00000399002 TMEM14EPQ6UXP3 125 aa6.92□□□□□ -1.3
SPTLC3-201ENST00000399002 ARL6IP6Q8N6S5 226 aa6.92□□□□□ -1.3
SPTLC3-201ENST00000399002 IGHV2-26A0A0B4J1V2 119 aa6.92□□□□□ -1.3
SPTLC3-201ENST00000399002 H0YIZ8 118 aa6.92□□□□□ -1.3
SPTLC3-201ENST00000399002 PAX2Q02962 417 aa6.92□□□□□ -1.3
SPTLC3-201ENST00000399002 ZNF585BQ52M93 769 aa6.92□□□□□ -1.3
SPTLC3-201ENST00000399002 CRIPAKQ8N1N5 446 aa6.92□□□□□ -1.3
SPTLC3-201ENST00000399002 USMG5Q96IX5 58 aa6.92□□□□□ -1.3
SPTLC3-201ENST00000399002 LINC00477Q96M19 166 aa6.92□□□□□ -1.3
SPTLC3-201ENST00000399002 TRAV41A0A0B4J266 112 aa6.91□□□□□ -1.3
SPTLC3-201ENST00000399002 IGHV3-66A0A0C4DH42 116 aa6.91□□□□□ -1.3
SPTLC3-201ENST00000399002 OCC1Q8TAD7 63 aa6.91□□□□□ -1.3
SPTLC3-201ENST00000399002 ABHD17AQ96GS6 310 aa6.91□□□□□ -1.3
SPTLC3-201ENST00000399002 TRPM7Q96QT4 1865 aa6.91□□□□□ -1.3
SPTLC3-201ENST00000399002 PRADC1Q9BSG0 188 aa6.91□□□□□ -1.3
SPTLC3-201ENST00000399002 DERL1Q9BUN8 251 aa6.91□□□□□ -1.3
SPTLC3-201ENST00000399002 GGTLC1Q9BX51 225 aa6.91□□□□□ -1.3
SPTLC3-201ENST00000399002 SLC25A15Q9Y619 301 aa6.91□□□□□ -1.3
SPTLC3-201ENST00000399002 CASP8AP2Q9UKL3 1982 aa6.91□□□□□ -1.3
SPTLC3-201ENST00000399002 CD28P10747 220 aa6.91□□□□□ -1.3
SPTLC3-201ENST00000399002 NMSQ5H8A3 153 aa6.91□□□□□ -1.3
SPTLC3-201ENST00000399002 S100A7L2Q5SY68 101 aa6.91□□□□□ -1.3
SPTLC3-201ENST00000399002 ASCL4Q6XD76 172 aa6.91□□□□□ -1.3
SPTLC3-201ENST00000399002 RPRMLQ8N4K4 120 aa6.91□□□□□ -1.3
SPTLC3-201ENST00000399002 NCOR1P1Q9H4R4 102 aa6.91□□□□□ -1.3
SPTLC3-201ENST00000399002 PNRC2Q9NPJ4 139 aaKnown RBP6.91□□□□□ -1.3
SPTLC3-201ENST00000399002 TRGV2A0A075B6R0 118 aa6.91□□□□□ -1.3
SPTLC3-201ENST00000399002 A0A1B0GWJ7 208 aa6.91□□□□□ -1.3
SPTLC3-201ENST00000399002 PSMB11A5LHX3 300 aa6.91□□□□□ -1.3
SPTLC3-201ENST00000399002 NAPSAO96009 420 aa6.91□□□□□ -1.3
SPTLC3-201ENST00000399002 SRSF3P84103 164 aaKnown RBP6.91□□□□□ -1.3
SPTLC3-201ENST00000399002 DMRTA1Q5VZB9 504 aa6.91□□□□□ -1.3
SPTLC3-201ENST00000399002 TMEM86BQ8N661 226 aa6.91□□□□□ -1.3
SPTLC3-201ENST00000399002 H3BUT2 72 aa6.91□□□□□ -1.3
SPTLC3-201ENST00000399002 HAX1O00165 279 aa6.91□□□□□ -1.3
SPTLC3-201ENST00000399002 GTSCR1Q86UQ5 136 aa6.91□□□□□ -1.3
SPTLC3-201ENST00000399002 IFI27L1Q96BM0 104 aa6.91□□□□□ -1.3
SPTLC3-201ENST00000399002 A8MWV9 139 aa6.9□□□□□ -1.3
SPTLC3-201ENST00000399002 SUPT4H1P63272 117 aaKnown RBP6.9□□□□□ -1.3
SPTLC3-201ENST00000399002 QRFPP83859 136 aa6.9□□□□□ -1.3
SPTLC3-201ENST00000399002 ZNF837Q96EG3 531 aaPredicted RBP6.9□□□□□ -1.3
SPTLC3-201ENST00000399002 TRIP12Q14669 1992 aaPredicted RBP6.9□□□□□ -1.3
SPTLC3-201ENST00000399002 IGHV1-8P0DP01 117 aa6.9□□□□□ -1.3
SPTLC3-201ENST00000399002 PSG3Q16557 428 aa6.9□□□□□ -1.3
SPTLC3-201ENST00000399002 C1orf194Q5T5A4 169 aa6.9□□□□□ -1.3
SPTLC3-201ENST00000399002 MGST2Q99735 147 aa6.9□□□□□ -1.3
SPTLC3-201ENST00000399002 HIST1H2BLQ99880 126 aa6.9□□□□□ -1.3
SPTLC3-201ENST00000399002 COLCA2A8K830 154 aa6.9□□□□□ -1.3
SPTLC3-201ENST00000399002 ZNF415Q09FC8 603 aa6.9□□□□□ -1.3
SPTLC3-201ENST00000399002 ZNF815PA8K554 130 aa6.9□□□□□ -1.31
SPTLC3-201ENST00000399002 PRR32B1ATL7 298 aa6.9□□□□□ -1.31
SPTLC3-201ENST00000399002 IGHV3-48P01763 117 aa6.9□□□□□ -1.31
SPTLC3-201ENST00000399002 SPATA31B1PQ5VZV4 182 aa6.9□□□□□ -1.31
SPTLC3-201ENST00000399002 FAM19A2Q8N3H0 131 aa6.9□□□□□ -1.31
SPTLC3-201ENST00000399002 RASL10AQ92737 203 aa6.9□□□□□ -1.31
SPTLC3-201ENST00000399002 SIGMAR1Q99720 223 aa6.9□□□□□ -1.31
SPTLC3-201ENST00000399002 DEPPQ9NTK1 212 aa6.9□□□□□ -1.31
SPTLC3-201ENST00000399002 IGHV3OR16-10A0A075B7F0 116 aa6.9□□□□□ -1.31
SPTLC3-201ENST00000399002 IGKV3OR2-268A0A0C4DH90 116 aa6.9□□□□□ -1.31
SPTLC3-201ENST00000399002 ADARB2-AS1A8MUL3 147 aa6.9□□□□□ -1.31
SPTLC3-201ENST00000399002 CRPP02741 224 aa6.9□□□□□ -1.31
SPTLC3-201ENST00000399002 EFNA4P52798 201 aa6.9□□□□□ -1.31
SPTLC3-201ENST00000399002 SEPSECSQ9HD40 501 aaKnown RBP6.9□□□□□ -1.31
SPTLC3-201ENST00000399002 IGHV1-3A0A0C4DH29 117 aa6.89□□□□□ -1.31
SPTLC3-201ENST00000399002 TMEM178BH3BS89 294 aa6.89□□□□□ -1.31
SPTLC3-201ENST00000399002 IGKV3-20P01619 116 aa6.89□□□□□ -1.31
SPTLC3-201ENST00000399002 CCL3L1P16619 93 aa6.89□□□□□ -1.31
SPTLC3-201ENST00000399002 ATRAIDQ6UW56 229 aa6.89□□□□□ -1.31
SPTLC3-201ENST00000399002 ZNF492Q9P255 531 aa6.89□□□□□ -1.31
SPTLC3-201ENST00000399002 TRAV8-2A0A0B4J237 113 aa6.89□□□□□ -1.31
SPTLC3-201ENST00000399002 H0YJW9 148 aa6.89□□□□□ -1.31
SPTLC3-201ENST00000399002 PDE6HQ13956 83 aa6.89□□□□□ -1.31
SPTLC3-201ENST00000399002 FAM201AQ5SY85 155 aa6.89□□□□□ -1.31
SPTLC3-201ENST00000399002 SAMD5Q5TGI4 173 aa6.89□□□□□ -1.31
SPTLC3-201ENST00000399002 VMO1Q7Z5L0 202 aa6.89□□□□□ -1.31
SPTLC3-201ENST00000399002 REG4Q9BYZ8 158 aa6.89□□□□□ -1.31
SPTLC3-201ENST00000399002 DPH3P1Q9H4G8 78 aa6.89□□□□□ -1.31
SPTLC3-201ENST00000399002 DICER1Q9UPY3 1922 aaKnown RBP6.89□□□□□ -1.31
SPTLC3-201ENST00000399002 M0R2P5 195 aa6.89□□□□□ -1.31
SPTLC3-201ENST00000399002 TIMM23O14925 209 aa6.89□□□□□ -1.31
SPTLC3-201ENST00000399002 TMEM75Q8N9X5 138 aa6.89□□□□□ -1.31
SPTLC3-201ENST00000399002 POLR2AP24928 1970 aaKnown RBP6.89□□□□□ -1.31
SPTLC3-201ENST00000399002 OTOFQ9HC10 1997 aa6.89□□□□□ -1.31
SPTLC3-201ENST00000399002 APOMO95445 188 aa6.89□□□□□ -1.31
SPTLC3-201ENST00000399002 PYYP10082 97 aa6.89□□□□□ -1.31
SPTLC3-201ENST00000399002 TMEM200BQ69YZ2 307 aa6.89□□□□□ -1.31
SPTLC3-201ENST00000399002 TCRAP04437 139 aa6.89□□□□□ -1.31
SPTLC3-201ENST00000399002 LTBRP36941 435 aa6.89□□□□□ -1.31
SPTLC3-201ENST00000399002 Q6P435 159 aa6.89□□□□□ -1.31
SPTLC3-201ENST00000399002 AMBPP02760 352 aa6.88□□□□□ -1.31
SPTLC3-201ENST00000399002 GATA2P23769 480 aaPredicted RBP6.88□□□□□ -1.31
SPTLC3-201ENST00000399002 ZNF138P52744 262 aa6.88□□□□□ -1.31
SPTLC3-201ENST00000399002 FAM90A2PQ658T7 463 aa6.88□□□□□ -1.31
SPTLC3-201ENST00000399002 ERG28Q9UKR5 140 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms