RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 VSTM5A8MXK1 200 aa10.85□□□□□ -0.67
GTF2F1-201ENST00000394456 ENSAO43768 121 aaKnown RBP10.85□□□□□ -0.67
GTF2F1-201ENST00000394456 CD3EP07766 207 aa10.85□□□□□ -0.67
GTF2F1-201ENST00000394456 C8orf88P0DMB2 117 aa10.85□□□□□ -0.67
GTF2F1-201ENST00000394456 Q71RC1 249 aaPredicted RBP10.85□□□□□ -0.67
GTF2F1-201ENST00000394456 OR1L8Q8NGR8 309 aa10.85□□□□□ -0.67
GTF2F1-201ENST00000394456 OR5B3Q8NH48 314 aa10.85□□□□□ -0.67
GTF2F1-201ENST00000394456 TMEM167BQ9NRX6 74 aa10.85□□□□□ -0.67
GTF2F1-201ENST00000394456 NAT8BQ9UHF3 227 aa10.85□□□□□ -0.67
GTF2F1-201ENST00000394456 CORTO00230 105 aa10.85□□□□□ -0.67
GTF2F1-201ENST00000394456 APOA2P02652 100 aa10.85□□□□□ -0.67
GTF2F1-201ENST00000394456 MFAP2P55001 183 aa10.85□□□□□ -0.67
GTF2F1-201ENST00000394456 NOL4LQ96MY1 436 aaPredicted RBP10.85□□□□□ -0.67
GTF2F1-201ENST00000394456 RAB9BQ9NP90 201 aa10.85□□□□□ -0.67
GTF2F1-201ENST00000394456 MALRD1Q5VYJ5 2156 aa10.84□□□□□ -0.67
GTF2F1-201ENST00000394456 A0A1W2PPI3 338 aa10.84□□□□□ -0.67
GTF2F1-201ENST00000394456 LEMD1Q68G75 181 aa10.84□□□□□ -0.67
GTF2F1-201ENST00000394456 TMEM136Q6ZRR5 245 aa10.84□□□□□ -0.67
GTF2F1-201ENST00000394456 SSX8Q7RTT4 187 aa10.84□□□□□ -0.67
GTF2F1-201ENST00000394456 GAL3ST2Q9H3Q3 398 aa10.84□□□□□ -0.67
GTF2F1-201ENST00000394456 C22orf46C9J442 243 aa10.84□□□□□ -0.67
GTF2F1-201ENST00000394456 DLL1O00548 723 aa10.84□□□□□ -0.67
GTF2F1-201ENST00000394456 SIAH2O43255 324 aa10.84□□□□□ -0.67
GTF2F1-201ENST00000394456 LOXP28300 417 aaPredicted RBP10.84□□□□□ -0.67
GTF2F1-201ENST00000394456 TIGITQ495A1 244 aa10.84□□□□□ -0.67
GTF2F1-201ENST00000394456 PRR27Q6MZM9 219 aa10.84□□□□□ -0.67
GTF2F1-201ENST00000394456 ZNF841Q6ZN19 808 aa10.84□□□□□ -0.67
GTF2F1-201ENST00000394456 OSR1Q8TAX0 266 aaPredicted RBP10.84□□□□□ -0.67
GTF2F1-201ENST00000394456 VN1R17PQ8TDU5 208 aa10.84□□□□□ -0.67
GTF2F1-201ENST00000394456 DNAJC4Q9NNZ3 241 aa10.84□□□□□ -0.67
GTF2F1-201ENST00000394456 FBXL7Q9UJT9 491 aa10.84□□□□□ -0.67
GTF2F1-201ENST00000394456 RPH3ALQ9UNE2 315 aa10.84□□□□□ -0.67
GTF2F1-201ENST00000394456 APOBEC3AP31941 199 aaPredicted RBP10.83□□□□□ -0.68
GTF2F1-201ENST00000394456 TMEM177Q53S58 311 aa10.83□□□□□ -0.68
GTF2F1-201ENST00000394456 IBA57Q5T440 356 aaKnown RBP10.83□□□□□ -0.68
GTF2F1-201ENST00000394456 TPTE2P1Q5T6R2 138 aa10.83□□□□□ -0.68
GTF2F1-201ENST00000394456 BLNKQ8WV28 456 aa10.83□□□□□ -0.68
GTF2F1-201ENST00000394456 PAM16Q9Y3D7 125 aa10.83□□□□□ -0.68
GTF2F1-201ENST00000394456 ISLRO14498 428 aa10.83□□□□□ -0.68
GTF2F1-201ENST00000394456 FSTL3O95633 263 aa10.83□□□□□ -0.68
GTF2F1-201ENST00000394456 ORM2P19652 201 aa10.83□□□□□ -0.68
GTF2F1-201ENST00000394456 COMPP49747 757 aaPredicted RBP10.83□□□□□ -0.68
GTF2F1-201ENST00000394456 CX3CL1P78423 397 aa10.83□□□□□ -0.68
GTF2F1-201ENST00000394456 FAM19A2Q8N3H0 131 aa10.83□□□□□ -0.68
GTF2F1-201ENST00000394456 ST6GALNAC6Q969X2 333 aa10.83□□□□□ -0.68
GTF2F1-201ENST00000394456 FNDC10F2Z333 226 aa10.82□□□□□ -0.68
GTF2F1-201ENST00000394456 COX7A2P2O60397 106 aa10.82□□□□□ -0.68
GTF2F1-201ENST00000394456 PPOXP50336 477 aa10.82□□□□□ -0.68
GTF2F1-201ENST00000394456 TAS2R60P59551 318 aa10.82□□□□□ -0.68
GTF2F1-201ENST00000394456 RANP62826 216 aaKnown RBP10.82□□□□□ -0.68
GTF2F1-201ENST00000394456 ERHP84090 104 aaKnown RBP10.82□□□□□ -0.68
GTF2F1-201ENST00000394456 ADORA2A-AS1P86434 159 aa10.82□□□□□ -0.68
GTF2F1-201ENST00000394456 LY6DQ14210 128 aa10.82□□□□□ -0.68
GTF2F1-201ENST00000394456 C1orf194Q5T5A4 169 aa10.82□□□□□ -0.68
GTF2F1-201ENST00000394456 GDF5OSQ5U4N7 250 aa10.82□□□□□ -0.68
GTF2F1-201ENST00000394456 C11orf42Q8N5U0 333 aa10.82□□□□□ -0.68
GTF2F1-201ENST00000394456 C2orf88Q9BSF0 95 aa10.82□□□□□ -0.68
GTF2F1-201ENST00000394456 A0A1W2PN81 502 aa10.82□□□□□ -0.68
GTF2F1-201ENST00000394456 BMPR1BO00238 502 aa10.82□□□□□ -0.68
GTF2F1-201ENST00000394456 PMCHP20382 165 aa10.82□□□□□ -0.68
GTF2F1-201ENST00000394456 TMEM167AQ8TBQ9 72 aa10.82□□□□□ -0.68
GTF2F1-201ENST00000394456 SAMD10Q9BYL1 202 aa10.82□□□□□ -0.68
GTF2F1-201ENST00000394456 IGHV1-69-2A0A0G2JMI3 117 aa10.81□□□□□ -0.68
GTF2F1-201ENST00000394456 TNFRSF13BO14836 293 aaPredicted RBP10.81□□□□□ -0.68
GTF2F1-201ENST00000394456 NDUFB3O43676 98 aa10.81□□□□□ -0.68
GTF2F1-201ENST00000394456 CD24P25063 80 aa10.81□□□□□ -0.68
GTF2F1-201ENST00000394456 SRIP30626 198 aa10.81□□□□□ -0.68
GTF2F1-201ENST00000394456 DLX6P56179 175 aa10.81□□□□□ -0.68
GTF2F1-201ENST00000394456 SLAQ13239 276 aa10.81□□□□□ -0.68
GTF2F1-201ENST00000394456 C10orf113Q5VZT2 155 aa10.81□□□□□ -0.68
GTF2F1-201ENST00000394456 ZNF329Q86UD4 541 aa10.81□□□□□ -0.68
GTF2F1-201ENST00000394456 OR4C13Q8NGP0 309 aa10.81□□□□□ -0.68
GTF2F1-201ENST00000394456 PAXXQ9BUH6 204 aa10.81□□□□□ -0.68
GTF2F1-201ENST00000394456 LY96Q9Y6Y9 160 aa10.81□□□□□ -0.68
GTF2F1-201ENST00000394456 ARHGAP32A7KAX9 2087 aa10.81□□□□□ -0.68
GTF2F1-201ENST00000394456 KIR2DL5BA0A0G2JN68 375 aa10.81□□□□□ -0.68
GTF2F1-201ENST00000394456 KIR2DL5BA0A0G2JPC4 375 aa10.81□□□□□ -0.68
GTF2F1-201ENST00000394456 GPR6P46095 362 aaPredicted RBP10.81□□□□□ -0.68
GTF2F1-201ENST00000394456 TPPP2P59282 170 aa10.81□□□□□ -0.68
GTF2F1-201ENST00000394456 TAS2R45P59539 299 aa10.81□□□□□ -0.68
GTF2F1-201ENST00000394456 KRTDAPP60985 99 aa10.81□□□□□ -0.68
GTF2F1-201ENST00000394456 LRRC10Q5BKY1 277 aa10.81□□□□□ -0.68
GTF2F1-201ENST00000394456 KIR2DL5AQ8N109 375 aa10.81□□□□□ -0.68
GTF2F1-201ENST00000394456 ASCL2Q99929 193 aa10.81□□□□□ -0.68
GTF2F1-201ENST00000394456 SSBP4Q9BWG4 385 aaPredicted RBP10.81□□□□□ -0.68
GTF2F1-201ENST00000394456 CDC42EP3Q9UKI2 254 aa10.81□□□□□ -0.68
GTF2F1-201ENST00000394456 AMMECR1Q9Y4X0 333 aaPredicted RBP10.81□□□□□ -0.68
GTF2F1-201ENST00000394456 A0A1W2PRE2 83 aa10.8□□□□□ -0.68
GTF2F1-201ENST00000394456 VWC2LB2RUY7 222 aa10.8□□□□□ -0.68
GTF2F1-201ENST00000394456 B9A039 149 aa10.8□□□□□ -0.68
GTF2F1-201ENST00000394456 USF1P22415 310 aaPredicted RBP10.8□□□□□ -0.68
GTF2F1-201ENST00000394456 MEF2CQ06413 473 aaPredicted RBP10.8□□□□□ -0.68
GTF2F1-201ENST00000394456 ZNF705AQ6ZN79 300 aaPredicted RBP10.8□□□□□ -0.68
GTF2F1-201ENST00000394456 LINC00305Q7Z4B0 112 aa10.8□□□□□ -0.68
GTF2F1-201ENST00000394456 MUC15Q8N387 334 aa10.8□□□□□ -0.68
GTF2F1-201ENST00000394456 OR1B1Q8NGR6 318 aa10.8□□□□□ -0.68
GTF2F1-201ENST00000394456 FXYD5Q96DB9 178 aa10.8□□□□□ -0.68
GTF2F1-201ENST00000394456 OSTCQ9NRP0 149 aa10.8□□□□□ -0.68
GTF2F1-201ENST00000394456 PKD1L2Q7Z442 2459 aa10.8□□□□□ -0.68
GTF2F1-201ENST00000394456 TOX4O94842 621 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms