RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 ACSM6Q6P461 480 aa8.8□□□□□ -1
NEDD9-201ENST00000379433 GTF2H5Q6ZYL4 71 aa8.8□□□□□ -1
NEDD9-201ENST00000379433 TAF15Q92804 592 aaKnown RBP eCLIP8.8□□□□□ -13e-6■□□□□ 9.1
NEDD9-201ENST00000379433 JMJD8Q96S16 334 aa8.8□□□□□ -1
NEDD9-201ENST00000379433 SETD2Q9BYW2 2564 aaPredicted RBP8.8□□□□□ -1
NEDD9-201ENST00000379433 CUBNO60494 3623 aa8.8□□□□□ -1
NEDD9-201ENST00000379433 RBFOX3A6NFN3 312 aa8.8□□□□□ -1
NEDD9-201ENST00000379433 TOMM40O96008 361 aa8.8□□□□□ -1
NEDD9-201ENST00000379433 GNLYP22749 145 aa8.8□□□□□ -1
NEDD9-201ENST00000379433 GATA2P23769 480 aaPredicted RBP8.8□□□□□ -1
NEDD9-201ENST00000379433 AWAT1Q58HT5 328 aa8.8□□□□□ -1
NEDD9-201ENST00000379433 CT83Q5H943 113 aa8.8□□□□□ -1
NEDD9-201ENST00000379433 TOMM20LQ6UXN7 152 aa8.8□□□□□ -1
NEDD9-201ENST00000379433 PBDC1Q9BVG4 233 aa8.8□□□□□ -1
NEDD9-201ENST00000379433 SMIM9A6NGZ8 99 aa8.8□□□□□ -1
NEDD9-201ENST00000379433 IGKV1D-33P01593 117 aa8.8□□□□□ -1
NEDD9-201ENST00000379433 IGKV1-33P01594 117 aa8.8□□□□□ -1
NEDD9-201ENST00000379433 PRB4P10163 310 aaPredicted RBP8.8□□□□□ -1
NEDD9-201ENST00000379433 PAFAH1B2P68402 229 aa8.8□□□□□ -1
NEDD9-201ENST00000379433 TCTEX1D4Q5JR98 221 aa8.8□□□□□ -1
NEDD9-201ENST00000379433 C12orf54Q6X4T0 127 aa8.8□□□□□ -1
NEDD9-201ENST00000379433 CIB3Q96Q77 187 aaPredicted RBP8.8□□□□□ -1
NEDD9-201ENST00000379433 CARHSP1Q9Y2V2 147 aaKnown RBP8.8□□□□□ -1
NEDD9-201ENST00000379433 SONP18583 2426 aaKnown RBP8.8□□□□□ -1
NEDD9-201ENST00000379433 CT45A6P0DMU7 189 aa8.79□□□□□ -1
NEDD9-201ENST00000379433 CT45A5P0DMU8 189 aa8.79□□□□□ -1
NEDD9-201ENST00000379433 CT45A7P0DMV0 189 aa8.79□□□□□ -1
NEDD9-201ENST00000379433 WDR61Q9GZS3 305 aaKnown RBP8.79□□□□□ -1
NEDD9-201ENST00000379433 JKAMPQ9P055 326 aa8.79□□□□□ -1
NEDD9-201ENST00000379433 HSPB8Q9UJY1 196 aa8.79□□□□□ -1
NEDD9-201ENST00000379433 TCF19Q9Y242 345 aa8.79□□□□□ -1
NEDD9-201ENST00000379433 COX11Q9Y6N1 276 aa8.79□□□□□ -1
NEDD9-201ENST00000379433 F2RL2O00254 374 aa8.79□□□□□ -1
NEDD9-201ENST00000379433 SLC17A3O00476 420 aa8.79□□□□□ -1
NEDD9-201ENST00000379433 RPUSD1Q9UJJ7 312 aaKnown RBP8.79□□□□□ -1
NEDD9-201ENST00000379433 HILPDAQ9Y5L2 63 aa8.79□□□□□ -1
NEDD9-201ENST00000379433 MAP1LC3B2A6NCE7 125 aa8.79□□□□□ -1
NEDD9-201ENST00000379433 NDUFB8O95169 186 aa8.79□□□□□ -1
NEDD9-201ENST00000379433 CNN1P51911 297 aaKnown RBP8.79□□□□□ -1
NEDD9-201ENST00000379433 LGALS4P56470 323 aa8.79□□□□□ -1
NEDD9-201ENST00000379433 IQCJQ1A5X6 159 aa8.79□□□□□ -1
NEDD9-201ENST00000379433 RITA1Q96K30 269 aa8.79□□□□□ -1
NEDD9-201ENST00000379433 NAA38Q9BRA0 125 aaKnown RBP8.79□□□□□ -1
NEDD9-201ENST00000379433 ACTR3CQ9C0K3 210 aaPredicted RBP8.79□□□□□ -1
NEDD9-201ENST00000379433 MAP1LC3BQ9GZQ8 125 aa8.79□□□□□ -1
NEDD9-201ENST00000379433 THYN1Q9P016 225 aa8.79□□□□□ -1
NEDD9-201ENST00000379433 J3QR06 171 aa8.78□□□□□ -1
NEDD9-201ENST00000379433 HSPB1P04792 205 aaKnown RBP8.78□□□□□ -1
NEDD9-201ENST00000379433 AMTP48728 403 aa8.78□□□□□ -1
NEDD9-201ENST00000379433 ZNF672Q499Z4 452 aaPredicted RBP8.78□□□□□ -1
NEDD9-201ENST00000379433 MIC13Q5XKP0 118 aa8.78□□□□□ -1
NEDD9-201ENST00000379433 SPSB3Q6PJ21 355 aa8.78□□□□□ -1
NEDD9-201ENST00000379433 RPP25LQ8N5L8 163 aaKnown RBP8.78□□□□□ -1
NEDD9-201ENST00000379433 OR10G4Q8NGN3 311 aa8.78□□□□□ -1
NEDD9-201ENST00000379433 OR10G9Q8NGN4 311 aa8.78□□□□□ -1
NEDD9-201ENST00000379433 OR10G7Q8NGN6 311 aa8.78□□□□□ -1
NEDD9-201ENST00000379433 SEC11CQ9BY50 192 aa8.78□□□□□ -1
NEDD9-201ENST00000379433 OR51B2Q9Y5P1 312 aa8.78□□□□□ -1
NEDD9-201ENST00000379433 ZANQ9Y493 2812 aa8.78□□□□□ -1
NEDD9-201ENST00000379433 RS1O15537 224 aa8.78□□□□□ -1
NEDD9-201ENST00000379433 SLC25A6P12236 298 aa8.78□□□□□ -1
NEDD9-201ENST00000379433 EIF4EBP1Q13541 118 aaPredicted RBP8.78□□□□□ -1
NEDD9-201ENST00000379433 ZNF726P1Q15940 193 aa8.78□□□□□ -1
NEDD9-201ENST00000379433 RTL8BQ17RB0 113 aa8.78□□□□□ -1
NEDD9-201ENST00000379433 UNQ5815/PRO19632Q6UWF5 114 aa8.78□□□□□ -1
NEDD9-201ENST00000379433 SLC35B3Q9H1N7 401 aa8.78□□□□□ -1
NEDD9-201ENST00000379433 CREBBPQ92793 2442 aa8.77□□□□□ -1
NEDD9-201ENST00000379433 GAGE12BA1L429 117 aa8.77□□□□□ -1
NEDD9-201ENST00000379433 C15orf62A8K5M9 175 aa8.77□□□□□ -1
NEDD9-201ENST00000379433 G3V4G9 280 aa8.77□□□□□ -1
NEDD9-201ENST00000379433 SAA1P0DJI8 122 aaPredicted RBP8.77□□□□□ -1
NEDD9-201ENST00000379433 RELBQ01201 579 aa8.77□□□□□ -1
NEDD9-201ENST00000379433 LRRC75BQ2VPJ9 315 aa8.77□□□□□ -1
NEDD9-201ENST00000379433 C1orf194Q5T5A4 169 aa8.77□□□□□ -1
NEDD9-201ENST00000379433 ACY3Q96HD9 319 aa8.77□□□□□ -1
NEDD9-201ENST00000379433 TPSG1Q9NRR2 321 aa8.77□□□□□ -1
NEDD9-201ENST00000379433 LINC00312Q9Y6C7 94 aa8.77□□□□□ -1
NEDD9-201ENST00000379433 NAV2Q8IVL1 2488 aa8.77□□□□□ -1.01
NEDD9-201ENST00000379433 C7orf77A4D0Y5 90 aa8.77□□□□□ -1.01
NEDD9-201ENST00000379433 NPIPB5A8MRT5 1133 aa8.77□□□□□ -1.01
NEDD9-201ENST00000379433 ZNF705FA8MVS1 300 aaPredicted RBP8.77□□□□□ -1.01
NEDD9-201ENST00000379433 ZNF561-AS1K7EIQ3 104 aa8.77□□□□□ -1.01
NEDD9-201ENST00000379433 PRB1P04280 392 aa8.77□□□□□ -1.01
NEDD9-201ENST00000379433 ZNF705DP0CH99 300 aaPredicted RBP8.77□□□□□ -1.01
NEDD9-201ENST00000379433 ZNF705BP0CI00 300 aaPredicted RBP8.77□□□□□ -1.01
NEDD9-201ENST00000379433 ESDP10768 282 aa8.77□□□□□ -1.01
NEDD9-201ENST00000379433 LOXP28300 417 aaPredicted RBP8.77□□□□□ -1.01
NEDD9-201ENST00000379433 HCP5Q6MZN7 132 aa8.77□□□□□ -1.01
NEDD9-201ENST00000379433 FAM71F2Q6NXP2 309 aa8.77□□□□□ -1.01
NEDD9-201ENST00000379433 HIST1H2BLQ99880 126 aa8.77□□□□□ -1.01
NEDD9-201ENST00000379433 CA2P00918 260 aa8.77□□□□□ -1.01
NEDD9-201ENST00000379433 GCGP01275 180 aa8.77□□□□□ -1.01
NEDD9-201ENST00000379433 CGB3P0DN86 165 aa8.77□□□□□ -1.01
NEDD9-201ENST00000379433 CGB7P0DN87 165 aa8.77□□□□□ -1.01
NEDD9-201ENST00000379433 CNTFRP26992 372 aa8.77□□□□□ -1.01
NEDD9-201ENST00000379433 RPS20P60866 119 aaKnown RBP8.77□□□□□ -1.01
NEDD9-201ENST00000379433 FAM78BQ5VT40 261 aa8.77□□□□□ -1.01
NEDD9-201ENST00000379433 TMEM14EPQ6UXP3 125 aa8.77□□□□□ -1.01
NEDD9-201ENST00000379433 PNKDQ8N490 385 aa8.77□□□□□ -1.01
NEDD9-201ENST00000379433 E7EUB6 86 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms