RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 IGLV3-9A0A075B6K5 115 aa8.79□□□□□ -1
CXCL12-203ENST00000374429 A1L4Q6 167 aa8.79□□□□□ -1
CXCL12-203ENST00000374429 AREGP15514 252 aa8.79□□□□□ -1
CXCL12-203ENST00000374429 SERF2P84101 59 aa8.79□□□□□ -1
CXCL12-203ENST00000374429 SMIM12Q96EX1 92 aa8.79□□□□□ -1
CXCL12-203ENST00000374429 NPVFQ9HCQ7 196 aa8.79□□□□□ -1
CXCL12-203ENST00000374429 POLR3KQ9Y2Y1 108 aaPredicted RBP8.79□□□□□ -1
CXCL12-203ENST00000374429 TEX50A0A1B0GTY4 177 aa8.79□□□□□ -1
CXCL12-203ENST00000374429 GRIFINA4D1Z8 144 aa8.79□□□□□ -1
CXCL12-203ENST00000374429 CLDN34H7C241 214 aa8.79□□□□□ -1
CXCL12-203ENST00000374429 K7ERU9 68 aa8.79□□□□□ -1
CXCL12-203ENST00000374429 STAG3L3P0CL85 134 aa8.79□□□□□ -1
CXCL12-203ENST00000374429 FAM90A2PQ658T7 463 aa8.79□□□□□ -1
CXCL12-203ENST00000374429 SCRT1Q9BWW7 348 aa8.79□□□□□ -1
CXCL12-203ENST00000374429 IGHV3-49A0A0A0MS15 119 aa8.79□□□□□ -1
CXCL12-203ENST00000374429 PPP5D1E7EU14 171 aa8.79□□□□□ -1
CXCL12-203ENST00000374429 FCN1O00602 326 aa8.79□□□□□ -1
CXCL12-203ENST00000374429 PPBPP02775 128 aa8.79□□□□□ -1
CXCL12-203ENST00000374429 GNB2P62879 340 aa8.79□□□□□ -1
CXCL12-203ENST00000374429 ZNF506Q5JVG8 444 aa8.79□□□□□ -1
CXCL12-203ENST00000374429 GBGT1Q8N5D6 347 aa8.79□□□□□ -1
CXCL12-203ENST00000374429 MS4A10Q96PG2 267 aa8.79□□□□□ -1
CXCL12-203ENST00000374429 SERTM2A0A1B0GWG4 89 aa8.78□□□□□ -1
CXCL12-203ENST00000374429 APOBEC3AP31941 199 aaPredicted RBP8.78□□□□□ -1
CXCL12-203ENST00000374429 SRSF7Q16629 238 aaKnown RBP eCLIP8.78□□□□□ -1
CXCL12-203ENST00000374429 OR4X1Q8NH49 305 aa8.78□□□□□ -1
CXCL12-203ENST00000374429 TMEM170AQ8WVE7 144 aa8.78□□□□□ -1
CXCL12-203ENST00000374429 NEIL1Q96FI4 390 aaPredicted RBP8.78□□□□□ -1
CXCL12-203ENST00000374429 MIEN1Q9BRT3 115 aa8.78□□□□□ -1
CXCL12-203ENST00000374429 COL27A1Q8IZC6 1860 aaPredicted RBP8.78□□□□□ -1
CXCL12-203ENST00000374429 K7EP13 123 aa8.78□□□□□ -1
CXCL12-203ENST00000374429 FCN3O75636 299 aa8.78□□□□□ -1
CXCL12-203ENST00000374429 LINC00869P0C866 280 aa8.78□□□□□ -1
CXCL12-203ENST00000374429 ZNF672Q499Z4 452 aaPredicted RBP8.78□□□□□ -1
CXCL12-203ENST00000374429 WFDC12Q8WWY7 111 aa8.78□□□□□ -1
CXCL12-203ENST00000374429 NABP2Q9BQ15 211 aa8.78□□□□□ -1
CXCL12-203ENST00000374429 VAMP8Q9BV40 100 aa8.78□□□□□ -1
CXCL12-203ENST00000374429 GGTLC1Q9BX51 225 aa8.78□□□□□ -1
CXCL12-203ENST00000374429 IGKV3-7A0A075B6H7 116 aa8.77□□□□□ -1
CXCL12-203ENST00000374429 SHISA9B4DS77 424 aa8.77□□□□□ -1
CXCL12-203ENST00000374429 COX7A2P2O60397 106 aa8.77□□□□□ -1
CXCL12-203ENST00000374429 LHBP01229 141 aa8.77□□□□□ -1
CXCL12-203ENST00000374429 LYZP61626 148 aa8.77□□□□□ -1
CXCL12-203ENST00000374429 FBLN7Q53RD9 439 aa8.77□□□□□ -1
CXCL12-203ENST00000374429 OCIAD2Q56VL3 154 aa8.77□□□□□ -1
CXCL12-203ENST00000374429 MORN5Q5VZ52 161 aa8.77□□□□□ -1
CXCL12-203ENST00000374429 UNQ5815/PRO19632Q6UWF5 114 aa8.77□□□□□ -1
CXCL12-203ENST00000374429 ST6GALNAC3Q8NDV1 305 aa8.77□□□□□ -1
CXCL12-203ENST00000374429 RNASEH2CQ8TDP1 164 aaKnown RBP8.77□□□□□ -1
CXCL12-203ENST00000374429 ZNF835Q9Y2P0 537 aa8.77□□□□□ -1
CXCL12-203ENST00000374429 C15orf61A6NNL5 157 aa8.77□□□□□ -1.01
CXCL12-203ENST00000374429 MRPL54Q6P161 138 aaKnown RBP8.77□□□□□ -1.01
CXCL12-203ENST00000374429 MAPK1IP1LQ8NDC0 245 aa8.77□□□□□ -1.01
CXCL12-203ENST00000374429 OR2D3Q8NGH3 330 aa8.77□□□□□ -1.01
CXCL12-203ENST00000374429 SGMS2Q8NHU3 365 aa8.77□□□□□ -1.01
CXCL12-203ENST00000374429 NRGNQ92686 78 aa8.77□□□□□ -1.01
CXCL12-203ENST00000374429 MEGF9Q9H1U4 602 aa8.77□□□□□ -1.01
CXCL12-203ENST00000374429 ZFHX3Q15911 3703 aa8.77□□□□□ -1.01
CXCL12-203ENST00000374429 MDFIC2A0A1B0GVS7 189 aa8.77□□□□□ -1.01
CXCL12-203ENST00000374429 NPIPB11E5RHQ5 1161 aa8.77□□□□□ -1.01
CXCL12-203ENST00000374429 PRB1P04280 392 aa8.77□□□□□ -1.01
CXCL12-203ENST00000374429 RPL23P62829 140 aaKnown RBP8.77□□□□□ -1.01
CXCL12-203ENST00000374429 GNG5P63218 68 aa8.77□□□□□ -1.01
CXCL12-203ENST00000374429 UBE2L3P68036 154 aaKnown RBP8.77□□□□□ -1.01
CXCL12-203ENST00000374429 EFNB3Q15768 340 aa8.77□□□□□ -1.01
CXCL12-203ENST00000374429 TRAT1Q6PIZ9 186 aa8.77□□□□□ -1.01
CXCL12-203ENST00000374429 HECTD1Q9ULT8 2610 aa8.77□□□□□ -1.01
CXCL12-203ENST00000374429 ANKRD17O75179 2603 aaKnown RBP8.76□□□□□ -1.01
CXCL12-203ENST00000374429 MUC21A0A0G2JKD1 596 aa8.76□□□□□ -1.01
CXCL12-203ENST00000374429 MUC21A0A140T8X8 626 aa8.76□□□□□ -1.01
CXCL12-203ENST00000374429 GNLYP22749 145 aa8.76□□□□□ -1.01
CXCL12-203ENST00000374429 HINT1P49773 126 aaPredicted RBP8.76□□□□□ -1.01
CXCL12-203ENST00000374429 PRRX1P54821 245 aa8.76□□□□□ -1.01
CXCL12-203ENST00000374429 MUC21Q5SSG8 566 aa8.76□□□□□ -1.01
CXCL12-203ENST00000374429 TPTE2P1Q5T6R2 138 aa8.76□□□□□ -1.01
CXCL12-203ENST00000374429 PQLC2Q6ZP29 291 aa8.76□□□□□ -1.01
CXCL12-203ENST00000374429 RNASE7Q9H1E1 156 aaKnown RBP8.76□□□□□ -1.01
CXCL12-203ENST00000374429 CST9LQ9H4G1 147 aa8.76□□□□□ -1.01
CXCL12-203ENST00000374429 IGHV3-66A0A0C4DH42 116 aa8.76□□□□□ -1.01
CXCL12-203ENST00000374429 GNG7O60262 68 aa8.76□□□□□ -1.01
CXCL12-203ENST00000374429 FRMD6-AS1P0C7T7 363 aa8.76□□□□□ -1.01
CXCL12-203ENST00000374429 NPPCP23582 126 aa8.76□□□□□ -1.01
CXCL12-203ENST00000374429 TMEM183BQ1AE95 376 aa8.76□□□□□ -1.01
CXCL12-203ENST00000374429 SLC25A33Q9BSK2 321 aa8.76□□□□□ -1.01
CXCL12-203ENST00000374429 YTHDF2Q9Y5A9 579 aaKnown RBP8.76□□□□□ -1.01
CXCL12-203ENST00000374429 LINC00312Q9Y6C7 94 aa8.76□□□□□ -1.01
CXCL12-203ENST00000374429 HIVEP2P31629 2446 aa8.76□□□□□ -1.01
CXCL12-203ENST00000374429 IGKV1OR2-108A0A075B7D4 117 aa8.76□□□□□ -1.01
CXCL12-203ENST00000374429 LOXP28300 417 aaPredicted RBP8.76□□□□□ -1.01
CXCL12-203ENST00000374429 RUSC1-AS1Q66K80 236 aa8.76□□□□□ -1.01
CXCL12-203ENST00000374429 STPG4Q8N801 248 aa8.76□□□□□ -1.01
CXCL12-203ENST00000374429 OR5AU1Q8NGC0 362 aa8.76□□□□□ -1.01
CXCL12-203ENST00000374429 MRPL36Q9P0J6 103 aaKnown RBP8.76□□□□□ -1.01
CXCL12-203ENST00000374429 DLL1O00548 723 aa8.75□□□□□ -1.01
CXCL12-203ENST00000374429 HNRNPA3P51991 378 aaKnown RBP8.75□□□□□ -1.01
CXCL12-203ENST00000374429 OR1L8Q8NGR8 309 aa8.75□□□□□ -1.01
CXCL12-203ENST00000374429 ORAOV1Q8WV07 137 aa8.75□□□□□ -1.01
CXCL12-203ENST00000374429 SDF2L1Q9HCN8 221 aa8.75□□□□□ -1.01
CXCL12-203ENST00000374429 NAT8Q9UHE5 227 aa8.75□□□□□ -1.01
CXCL12-203ENST00000374429 WDR83OSQ9Y284 106 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms