RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 CD177Q8N6Q3 437 aa9.98□□□□□ -0.81
NCDN-202ENST00000373243 MGST2Q99735 147 aa9.98□□□□□ -0.81
NCDN-202ENST00000373243 MCRIP2Q9BUT9 160 aaKnown RBP9.98□□□□□ -0.81
NCDN-202ENST00000373243 C11orf1Q9H5F2 150 aa9.98□□□□□ -0.81
NCDN-202ENST00000373243 YTHDF2Q9Y5A9 579 aaKnown RBP9.98□□□□□ -0.81
NCDN-202ENST00000373243 TSSC4Q9Y5U2 329 aaPredicted RBP9.98□□□□□ -0.81
NCDN-202ENST00000373243 MALRD1Q5VYJ5 2156 aa9.98□□□□□ -0.81
NCDN-202ENST00000373243 OTOGLQ3ZCN5 2332 aa9.98□□□□□ -0.81
NCDN-202ENST00000373243 ISLRO14498 428 aa9.97□□□□□ -0.81
NCDN-202ENST00000373243 PEAR1Q5VY43 1037 aaPredicted RBP9.97□□□□□ -0.81
NCDN-202ENST00000373243 GEMIN7Q9H840 131 aaKnown RBP9.97□□□□□ -0.81
NCDN-202ENST00000373243 IL36BQ9NZH7 164 aa9.97□□□□□ -0.81
NCDN-202ENST00000373243 RNF7Q9UBF6 113 aa9.97□□□□□ -0.81
NCDN-202ENST00000373243 OR4C46A6NHA9 309 aa9.97□□□□□ -0.81
NCDN-202ENST00000373243 MEF2CQ06413 473 aaPredicted RBP9.97□□□□□ -0.81
NCDN-202ENST00000373243 SHISA2Q6UWI4 295 aa9.97□□□□□ -0.81
NCDN-202ENST00000373243 Q6ZSR3 168 aa9.97□□□□□ -0.81
NCDN-202ENST00000373243 ZNF295-AS1Q8N0V1 137 aa9.97□□□□□ -0.81
NCDN-202ENST00000373243 PMCHL2Q9BQD1 86 aa9.97□□□□□ -0.81
NCDN-202ENST00000373243 PRO3102Q9H379 93 aa9.97□□□□□ -0.81
NCDN-202ENST00000373243 IGLC1P0CG04 106 aa9.97□□□□□ -0.81
NCDN-202ENST00000373243 NPPCP23582 126 aa9.97□□□□□ -0.81
NCDN-202ENST00000373243 ACP1P24666 158 aa9.97□□□□□ -0.81
NCDN-202ENST00000373243 HES1Q14469 280 aa9.97□□□□□ -0.81
NCDN-202ENST00000373243 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.97□□□□□ -0.818e-8■■■■□ 19.9
NCDN-202ENST00000373243 DEFB125Q8N687 156 aa9.97□□□□□ -0.81
NCDN-202ENST00000373243 Q8N976 141 aa9.97□□□□□ -0.81
NCDN-202ENST00000373243 NPIPB3Q92617 1050 aa9.97□□□□□ -0.81
NCDN-202ENST00000373243 NEUROG1Q92886 237 aa9.97□□□□□ -0.81
NCDN-202ENST00000373243 OR8B2Q96RD0 313 aa9.97□□□□□ -0.81
NCDN-202ENST00000373243 MBNL3Q9NUK0 354 aaKnown RBP9.97□□□□□ -0.81
NCDN-202ENST00000373243 PRNDQ9UKY0 176 aa9.97□□□□□ -0.81
NCDN-202ENST00000373243 TRBV6-6A0A0A6YYG2 114 aa9.96□□□□□ -0.81
NCDN-202ENST00000373243 TRAV5A0A0B4J249 113 aa9.96□□□□□ -0.81
NCDN-202ENST00000373243 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.96□□□□□ -0.81
NCDN-202ENST00000373243 RBP4P02753 201 aa9.96□□□□□ -0.81
NCDN-202ENST00000373243 COX7A1P24310 79 aa9.96□□□□□ -0.81
NCDN-202ENST00000373243 RPS20P60866 119 aaKnown RBP9.96□□□□□ -0.81
NCDN-202ENST00000373243 FOXL1Q12952 345 aa9.96□□□□□ -0.81
NCDN-202ENST00000373243 OR4F17Q8NGA8 305 aa9.96□□□□□ -0.81
NCDN-202ENST00000373243 SSBP4Q9BWG4 385 aaPredicted RBP9.96□□□□□ -0.81
NCDN-202ENST00000373243 SPG11Q96JI7 2443 aa9.96□□□□□ -0.81
NCDN-202ENST00000373243 TNRC6AQ8NDV7 1962 aaKnown RBP9.96□□□□□ -0.81
NCDN-202ENST00000373243 LRP4O75096 1905 aa9.96□□□□□ -0.81
NCDN-202ENST00000373243 hADV38S2A0JD32 116 aa9.96□□□□□ -0.81
NCDN-202ENST00000373243 LINC00479Q96M42 142 aa9.96□□□□□ -0.81
NCDN-202ENST00000373243 JPT1Q9UK76 154 aa9.96□□□□□ -0.81
NCDN-202ENST00000373243 SAA2-SAA4A0A096LPE2 208 aa9.96□□□□□ -0.82
NCDN-202ENST00000373243 SAA2P0DJI9 122 aaPredicted RBP9.96□□□□□ -0.82
NCDN-202ENST00000373243 TNXAQ16473 311 aa9.96□□□□□ -0.82
NCDN-202ENST00000373243 C10orf113Q5VZT2 155 aa9.96□□□□□ -0.82
NCDN-202ENST00000373243 C19orf35Q6ZS72 473 aa9.96□□□□□ -0.82
NCDN-202ENST00000373243 OR8B3Q8NGG8 313 aa9.96□□□□□ -0.82
NCDN-202ENST00000373243 EAF1Q96JC9 268 aaPredicted RBP9.96□□□□□ -0.82
NCDN-202ENST00000373243 PAXXQ9BUH6 204 aa9.96□□□□□ -0.82
NCDN-202ENST00000373243 MOSP00540 346 aa9.95□□□□□ -0.82
NCDN-202ENST00000373243 PYYP10082 97 aa9.95□□□□□ -0.82
NCDN-202ENST00000373243 HTR1DP28221 377 aa9.95□□□□□ -0.82
NCDN-202ENST00000373243 C10orf55Q5SWW7 151 aa9.95□□□□□ -0.82
NCDN-202ENST00000373243 Q6ZR03 302 aa9.95□□□□□ -0.82
NCDN-202ENST00000373243 OR2K2Q8NGT1 345 aa9.95□□□□□ -0.82
NCDN-202ENST00000373243 SAP30LQ9HAJ7 183 aa9.95□□□□□ -0.82
NCDN-202ENST00000373243 AMMECR1Q9Y4X0 333 aaPredicted RBP9.95□□□□□ -0.82
NCDN-202ENST00000373243 LYZP61626 148 aa9.95□□□□□ -0.82
NCDN-202ENST00000373243 HSD52Q0P140 79 aa9.95□□□□□ -0.82
NCDN-202ENST00000373243 FRYQ5TBA9 3013 aa9.95□□□□□ -0.82
NCDN-202ENST00000373243 TEX48A0A1B0GUV7 120 aa9.95□□□□□ -0.82
NCDN-202ENST00000373243 PGPA6NDG6 321 aa9.95□□□□□ -0.82
NCDN-202ENST00000373243 BMPR1BO00238 502 aa9.95□□□□□ -0.82
NCDN-202ENST00000373243 WISP2O76076 250 aa9.95□□□□□ -0.82
NCDN-202ENST00000373243 STAG3L2P0CL84 134 aa9.95□□□□□ -0.82
NCDN-202ENST00000373243 KIR2DS2P43631 304 aa9.95□□□□□ -0.82
NCDN-202ENST00000373243 YPEL3P61236 119 aaPredicted RBP9.95□□□□□ -0.82
NCDN-202ENST00000373243 DAZAP2Q15038 168 aaPredicted RBP9.95□□□□□ -0.82
NCDN-202ENST00000373243 PDPNQ86YL7 162 aa9.95□□□□□ -0.82
NCDN-202ENST00000373243 SPCS1Q9Y6A9 102 aa9.95□□□□□ -0.82
NCDN-202ENST00000373243 TMSB15BA0A087X1C1 80 aa9.94□□□□□ -0.82
NCDN-202ENST00000373243 GFRA3O60609 400 aa9.94□□□□□ -0.82
NCDN-202ENST00000373243 IGLV2-14P01704 120 aa9.94□□□□□ -0.82
NCDN-202ENST00000373243 C8orf88P0DMB2 117 aa9.94□□□□□ -0.82
NCDN-202ENST00000373243 CT45A6P0DMU7 189 aa9.94□□□□□ -0.82
NCDN-202ENST00000373243 CT45A5P0DMU8 189 aa9.94□□□□□ -0.82
NCDN-202ENST00000373243 CT45A7P0DMV0 189 aa9.94□□□□□ -0.82
NCDN-202ENST00000373243 CCL3L1P16619 93 aa9.94□□□□□ -0.82
NCDN-202ENST00000373243 CT45A1Q5HYN5 189 aa9.94□□□□□ -0.82
NCDN-202ENST00000373243 CT45A3Q8NHU0 189 aa9.94□□□□□ -0.82
NCDN-202ENST00000373243 SNRNP40Q96DI7 357 aaKnown RBP9.94□□□□□ -0.82
NCDN-202ENST00000373243 MRPL27Q9P0M9 148 aaKnown RBP9.94□□□□□ -0.82
NCDN-202ENST00000373243 FAM27E3Q08E93 113 aa9.94□□□□□ -0.82
NCDN-202ENST00000373243 SSX8Q7RTT4 187 aa9.94□□□□□ -0.82
NCDN-202ENST00000373243 OR1L8Q8NGR8 309 aa9.94□□□□□ -0.82
NCDN-202ENST00000373243 TSKUQ8WUA8 353 aa9.94□□□□□ -0.82
NCDN-202ENST00000373243 ADTRPQ96IZ2 230 aa9.94□□□□□ -0.82
NCDN-202ENST00000373243 SRSF8Q9BRL6 282 aaKnown RBP9.94□□□□□ -0.82
NCDN-202ENST00000373243 JKAMPQ9P055 326 aa9.94□□□□□ -0.82
NCDN-202ENST00000373243 NDUFB3O43676 98 aa9.94□□□□□ -0.82
NCDN-202ENST00000373243 OR1L4Q8NGR5 311 aa9.94□□□□□ -0.82
NCDN-202ENST00000373243 OR10AG1Q8NH19 301 aa9.94□□□□□ -0.82
NCDN-202ENST00000373243 FAM222BQ8WU58 562 aa9.94□□□□□ -0.82
NCDN-202ENST00000373243 NBEAQ8NFP9 2946 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms