RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 IGKV3D-11A0A0A0MRZ8 115 aa10.59□□□□□ -0.71
GPC4-201ENST00000370828 FOXH1O75593 365 aa10.59□□□□□ -0.71
GPC4-201ENST00000370828 CFHR5Q9BXR6 569 aa10.59□□□□□ -0.71
GPC4-201ENST00000370828 RAB1BQ9H0U4 201 aa10.59□□□□□ -0.71
GPC4-201ENST00000370828 HBDP02042 147 aa10.59□□□□□ -0.71
GPC4-201ENST00000370828 EVI2AP22794 236 aa10.59□□□□□ -0.71
GPC4-201ENST00000370828 LEPP41159 167 aa10.59□□□□□ -0.71
GPC4-201ENST00000370828 DLX6P56179 175 aa10.59□□□□□ -0.71
GPC4-201ENST00000370828 KIAA2026Q5HYC2 2103 aa10.59□□□□□ -0.71
GPC4-201ENST00000370828 IGHV3-35A0A0C4DH35 117 aa10.58□□□□□ -0.72
GPC4-201ENST00000370828 Q6ZRM9 215 aa10.58□□□□□ -0.72
GPC4-201ENST00000370828 TMEM14EPQ6UXP3 125 aa10.58□□□□□ -0.72
GPC4-201ENST00000370828 Q9H3A6 140 aa10.58□□□□□ -0.72
GPC4-201ENST00000370828 DOCK6Q96HP0 2047 aa10.58□□□□□ -0.72
GPC4-201ENST00000370828 IGHV1-45A0A0A0MS14 117 aa10.58□□□□□ -0.72
GPC4-201ENST00000370828 FXYD7P58549 80 aa10.58□□□□□ -0.72
GPC4-201ENST00000370828 IFI27L1Q96BM0 104 aa10.58□□□□□ -0.72
GPC4-201ENST00000370828 COQ2Q96H96 371 aa10.58□□□□□ -0.72
GPC4-201ENST00000370828 FMC1Q96HJ9 113 aa10.58□□□□□ -0.72
GPC4-201ENST00000370828 SRSF8Q9BRL6 282 aaKnown RBP10.58□□□□□ -0.72
GPC4-201ENST00000370828 C1QTNF5Q9BXJ0 243 aa10.58□□□□□ -0.72
GPC4-201ENST00000370828 FANCMQ8IYD8 2048 aa10.58□□□□□ -0.72
GPC4-201ENST00000370828 DOCK3Q8IZD9 2030 aa10.58□□□□□ -0.72
GPC4-201ENST00000370828 COL5A3P25940 1745 aaPredicted RBP10.58□□□□□ -0.72
GPC4-201ENST00000370828 TCTEX1D4Q5JR98 221 aa10.58□□□□□ -0.72
GPC4-201ENST00000370828 PPP1R27Q86WC6 154 aa10.58□□□□□ -0.72
GPC4-201ENST00000370828 FOXI3A8MTJ6 420 aaPredicted RBP10.57□□□□□ -0.72
GPC4-201ENST00000370828 C1QTNF4Q9BXJ3 329 aa10.57□□□□□ -0.72
GPC4-201ENST00000370828 C9JCJ5 164 aa10.57□□□□□ -0.72
GPC4-201ENST00000370828 TFF1P04155 84 aa10.57□□□□□ -0.72
GPC4-201ENST00000370828 Q0VG73 95 aa10.57□□□□□ -0.72
GPC4-201ENST00000370828 ETDBQ3ZM63 59 aa10.57□□□□□ -0.72
GPC4-201ENST00000370828 WDR31Q8NA23 367 aa10.57□□□□□ -0.72
GPC4-201ENST00000370828 WBP1Q96G27 269 aa10.57□□□□□ -0.72
GPC4-201ENST00000370828 SLC25A2Q9BXI2 301 aa10.57□□□□□ -0.72
GPC4-201ENST00000370828 EPDR1Q9UM22 224 aa10.57□□□□□ -0.72
GPC4-201ENST00000370828 SH2D7A6NKC9 451 aaPredicted RBP10.57□□□□□ -0.72
GPC4-201ENST00000370828 DNAL4O96015 105 aa10.57□□□□□ -0.72
GPC4-201ENST00000370828 ERVK11-1P61568 191 aa10.57□□□□□ -0.72
GPC4-201ENST00000370828 ECSCRQ19T08 205 aa10.57□□□□□ -0.72
GPC4-201ENST00000370828 OR9G1Q8NH87 305 aa10.57□□□□□ -0.72
GPC4-201ENST00000370828 THSD7AQ9UPZ6 1657 aa10.57□□□□□ -0.72
GPC4-201ENST00000370828 PHLDA3Q9Y5J5 127 aa10.57□□□□□ -0.72
GPC4-201ENST00000370828 LRRK1Q38SD2 2015 aa10.57□□□□□ -0.72
GPC4-201ENST00000370828 TIAF1O95411 115 aa10.56□□□□□ -0.72
GPC4-201ENST00000370828 SCGB3A1Q96QR1 104 aa10.56□□□□□ -0.72
GPC4-201ENST00000370828 VKORC1Q9BQB6 163 aa10.56□□□□□ -0.72
GPC4-201ENST00000370828 PARP14Q460N5 1801 aa10.56□□□□□ -0.72
GPC4-201ENST00000370828 ABHD17AQ96GS6 310 aa10.56□□□□□ -0.72
GPC4-201ENST00000370828 MRPL27Q9P0M9 148 aaKnown RBP10.56□□□□□ -0.72
GPC4-201ENST00000370828 RFPL3SP0C7P2 107 aa10.56□□□□□ -0.72
GPC4-201ENST00000370828 RBX1P62877 108 aa10.56□□□□□ -0.72
GPC4-201ENST00000370828 FLVCR1-AS1Q8TAF5 88 aa10.56□□□□□ -0.72
GPC4-201ENST00000370828 DIDO1Q9BTC0 2240 aaKnown RBP10.56□□□□□ -0.72
GPC4-201ENST00000370828 LCTP09848 1927 aa10.56□□□□□ -0.72
GPC4-201ENST00000370828 ZNF114Q8NC26 417 aa10.56□□□□□ -0.72
GPC4-201ENST00000370828 NUP35Q8NFH5 326 aa10.56□□□□□ -0.72
GPC4-201ENST00000370828 HES7Q9BYE0 225 aa10.56□□□□□ -0.72
GPC4-201ENST00000370828 CHCHD2Q9Y6H1 151 aaPredicted RBP10.56□□□□□ -0.72
GPC4-201ENST00000370828 ACP7Q6ZNF0 438 aa10.55□□□□□ -0.72
GPC4-201ENST00000370828 S4R3C0 116 aa10.55□□□□□ -0.72
GPC4-201ENST00000370828 KIR2DL5BA0A0G2JN68 375 aa10.55□□□□□ -0.72
GPC4-201ENST00000370828 KIR2DL5BA0A0G2JPC4 375 aa10.55□□□□□ -0.72
GPC4-201ENST00000370828 KIR2DL5AQ8N109 375 aa10.55□□□□□ -0.72
GPC4-201ENST00000370828 TEX45Q8NA69 505 aa10.55□□□□□ -0.72
GPC4-201ENST00000370828 COLQQ9Y215 455 aaPredicted RBP10.55□□□□□ -0.72
GPC4-201ENST00000370828 MTCL1Q9Y4B5 1905 aaKnown RBP10.55□□□□□ -0.72
GPC4-201ENST00000370828 ZNF726P1Q15940 193 aa10.55□□□□□ -0.72
GPC4-201ENST00000370828 PRSS8Q16651 343 aa10.55□□□□□ -0.72
GPC4-201ENST00000370828 GTSCR1Q86UQ5 136 aa10.55□□□□□ -0.72
GPC4-201ENST00000370828 DOCK9Q9BZ29 2069 aa10.55□□□□□ -0.72
GPC4-201ENST00000370828 TMEM258P61165 79 aa10.55□□□□□ -0.72
GPC4-201ENST00000370828 PTPRDP23468 1912 aa10.54□□□□□ -0.72
GPC4-201ENST00000370828 DPM2O94777 84 aa10.54□□□□□ -0.72
GPC4-201ENST00000370828 IGLL1P15814 213 aa10.54□□□□□ -0.72
GPC4-201ENST00000370828 ATP5L2Q7Z4Y8 100 aa10.54□□□□□ -0.72
GPC4-201ENST00000370828 NXT2Q9NPJ8 142 aaKnown RBP10.54□□□□□ -0.72
GPC4-201ENST00000370828 RBBP6Q7Z6E9 1792 aaKnown RBP10.54□□□□□ -0.72
GPC4-201ENST00000370828 LINC00271P0C7V0 271 aa10.54□□□□□ -0.72
GPC4-201ENST00000370828 GLRXP35754 106 aa10.54□□□□□ -0.72
GPC4-201ENST00000370828 ARTNQ5T4W7 220 aa10.54□□□□□ -0.72
GPC4-201ENST00000370828 MRPL55Q7Z7F7 128 aaKnown RBP10.54□□□□□ -0.72
GPC4-201ENST00000370828 CASP8AP2Q9UKL3 1982 aa10.54□□□□□ -0.72
GPC4-201ENST00000370828 PHF3Q92576 2039 aaKnown RBP10.54□□□□□ -0.72
GPC4-201ENST00000370828 IGHV3OR16-13A0A075B7E8 117 aa10.54□□□□□ -0.72
GPC4-201ENST00000370828 IGHV3-74A0A0B4J1X5 117 aa10.54□□□□□ -0.72
GPC4-201ENST00000370828 J3QW42 95 aa10.54□□□□□ -0.72
GPC4-201ENST00000370828 CFPP27918 469 aa10.54□□□□□ -0.72
GPC4-201ENST00000370828 TEX43Q6ZNM6 134 aa10.54□□□□□ -0.72
GPC4-201ENST00000370828 FGFBP3Q8TAT2 258 aa10.54□□□□□ -0.72
GPC4-201ENST00000370828 C16orf92Q96LL3 132 aa10.54□□□□□ -0.72
GPC4-201ENST00000370828 DUX5Q96PT3 197 aa10.54□□□□□ -0.72
GPC4-201ENST00000370828 ARRDC1-AS1Q9H2J1 176 aa10.54□□□□□ -0.72
GPC4-201ENST00000370828 EFNA2O43921 213 aa10.54□□□□□ -0.72
GPC4-201ENST00000370828 PCOLCEQ15113 449 aa10.54□□□□□ -0.72
GPC4-201ENST00000370828 FAM201AQ5SY85 155 aa10.54□□□□□ -0.72
GPC4-201ENST00000370828 FAM53AQ6NSI3 398 aaPredicted RBP10.54□□□□□ -0.72
GPC4-201ENST00000370828 ZNF497Q6ZNH5 498 aa10.54□□□□□ -0.72
GPC4-201ENST00000370828 SP7Q8TDD2 431 aaPredicted RBP10.54□□□□□ -0.72
GPC4-201ENST00000370828 SHANK3Q9BYB0 1731 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms