RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 ID3Q02535 119 aa11.48□□□□□ -0.57
SMPDL3A-201ENST00000368440 MLANAQ16655 118 aa11.48□□□□□ -0.57
SMPDL3A-201ENST00000368440 C2orf83Q53S99 150 aa11.48□□□□□ -0.57
SMPDL3A-201ENST00000368440 ADAMTSL5Q6ZMM2 481 aa11.48□□□□□ -0.57
SMPDL3A-201ENST00000368440 BSCL2Q96G97 398 aaPredicted RBP11.48□□□□□ -0.57
SMPDL3A-201ENST00000368440 ELOVL1Q9BW60 279 aa11.48□□□□□ -0.57
SMPDL3A-201ENST00000368440 SMIM3Q9BZL3 60 aa11.48□□□□□ -0.57
SMPDL3A-201ENST00000368440 MRPL36Q9P0J6 103 aaKnown RBP11.48□□□□□ -0.57
SMPDL3A-201ENST00000368440 FAM24AA6NFZ4 105 aa11.47□□□□□ -0.57
SMPDL3A-201ENST00000368440 PVALBP20472 110 aaPredicted RBP11.47□□□□□ -0.57
SMPDL3A-201ENST00000368440 INSL3P51460 131 aa11.47□□□□□ -0.57
SMPDL3A-201ENST00000368440 UNQ9165/PRO28630Q6UXU0 137 aa11.47□□□□□ -0.57
SMPDL3A-201ENST00000368440 GPHB5Q86YW7 130 aa11.47□□□□□ -0.57
SMPDL3A-201ENST00000368440 OR4C12Q96R67 309 aa11.47□□□□□ -0.57
SMPDL3A-201ENST00000368440 HIPK2Q9H2X6 1198 aa11.47□□□□□ -0.57
SMPDL3A-201ENST00000368440 CACFD1Q9UGQ2 172 aa11.47□□□□□ -0.57
SMPDL3A-201ENST00000368440 WI2-2373I1.2A0A1W2PRP0 233 aa11.46□□□□□ -0.57
SMPDL3A-201ENST00000368440 CFDP00746 253 aaPredicted RBP11.46□□□□□ -0.57
SMPDL3A-201ENST00000368440 CTSGP08311 255 aa11.46□□□□□ -0.57
SMPDL3A-201ENST00000368440 NPY1RP25929 384 aa11.46□□□□□ -0.57
SMPDL3A-201ENST00000368440 MFAP4P55083 255 aa11.46□□□□□ -0.57
SMPDL3A-201ENST00000368440 ZNF345Q14585 488 aa11.46□□□□□ -0.57
SMPDL3A-201ENST00000368440 REC114Q7Z4M0 266 aa11.46□□□□□ -0.57
SMPDL3A-201ENST00000368440 ZNF471Q9BX82 626 aaPredicted RBP11.46□□□□□ -0.57
SMPDL3A-201ENST00000368440 FAM90A26D6RGX4 464 aa11.46□□□□□ -0.58
SMPDL3A-201ENST00000368440 CORTO00230 105 aa11.46□□□□□ -0.58
SMPDL3A-201ENST00000368440 BCL2L11O43521 198 aa11.46□□□□□ -0.58
SMPDL3A-201ENST00000368440 TMEM50AO95807 157 aa11.46□□□□□ -0.58
SMPDL3A-201ENST00000368440 FCGR2BP31994 310 aaPredicted RBP11.46□□□□□ -0.58
SMPDL3A-201ENST00000368440 OPRK1P41145 380 aa11.46□□□□□ -0.58
SMPDL3A-201ENST00000368440 CACNG8Q8WXS5 425 aa11.46□□□□□ -0.58
SMPDL3A-201ENST00000368440 AQP10Q96PS8 301 aa11.46□□□□□ -0.58
SMPDL3A-201ENST00000368440 ATP6V0BQ99437 205 aa11.46□□□□□ -0.58
SMPDL3A-201ENST00000368440 PEMTQ9UBM1 199 aa11.46□□□□□ -0.58
SMPDL3A-201ENST00000368440 ZNF320A2RRD8 509 aa11.45□□□□□ -0.58
SMPDL3A-201ENST00000368440 LGALS9O00182 355 aa11.45□□□□□ -0.58
SMPDL3A-201ENST00000368440 SYNGR2O43760 224 aa11.45□□□□□ -0.58
SMPDL3A-201ENST00000368440 IFNA10P01566 189 aa11.45□□□□□ -0.58
SMPDL3A-201ENST00000368440 IGLV1-51P01701 117 aa11.45□□□□□ -0.58
SMPDL3A-201ENST00000368440 SPSB3Q6PJ21 355 aa11.45□□□□□ -0.58
SMPDL3A-201ENST00000368440 TEX261Q6UWH6 196 aa11.45□□□□□ -0.58
SMPDL3A-201ENST00000368440 PRR25Q96S07 402 aa11.45□□□□□ -0.58
SMPDL3A-201ENST00000368440 ARPC5LQ9BPX5 153 aa11.45□□□□□ -0.58
SMPDL3A-201ENST00000368440 PAIP2BQ9ULR5 123 aaKnown RBP11.45□□□□□ -0.58
SMPDL3A-201ENST00000368440 U3KQ87 197 aa11.45□□□□□ -0.58
SMPDL3A-201ENST00000368440 IGHV3OR16-8A0A075B7F1 116 aa11.44□□□□□ -0.58
SMPDL3A-201ENST00000368440 TMEM213A2RRL7 107 aa11.44□□□□□ -0.58
SMPDL3A-201ENST00000368440 C2orf70A6NJV1 201 aa11.44□□□□□ -0.58
SMPDL3A-201ENST00000368440 K7EIL1 84 aa11.44□□□□□ -0.58
SMPDL3A-201ENST00000368440 P2RY1P47900 373 aa11.44□□□□□ -0.58
SMPDL3A-201ENST00000368440 NHLH2Q02577 135 aa11.44□□□□□ -0.58
SMPDL3A-201ENST00000368440 FAM106AQ4KMX7 169 aa11.44□□□□□ -0.58
SMPDL3A-201ENST00000368440 TXN2Q99757 166 aa11.44□□□□□ -0.58
SMPDL3A-201ENST00000368440 SELENOKQ9Y6D0 94 aa11.44□□□□□ -0.58
SMPDL3A-201ENST00000368440 IGSF23A1L1A6 192 aa11.44□□□□□ -0.58
SMPDL3A-201ENST00000368440 A8MWP6 167 aa11.44□□□□□ -0.58
SMPDL3A-201ENST00000368440 GNG7O60262 68 aa11.44□□□□□ -0.58
SMPDL3A-201ENST00000368440 PAX9P55771 341 aa11.44□□□□□ -0.58
SMPDL3A-201ENST00000368440 TM4SF20Q53R12 229 aa11.44□□□□□ -0.58
SMPDL3A-201ENST00000368440 ZNF680Q8NEM1 530 aa11.44□□□□□ -0.58
SMPDL3A-201ENST00000368440 RNASEH2CQ8TDP1 164 aaKnown RBP11.44□□□□□ -0.58
SMPDL3A-201ENST00000368440 PCNPQ8WW12 178 aaKnown RBP11.44□□□□□ -0.58
SMPDL3A-201ENST00000368440 C11orf1Q9H5F2 150 aa11.44□□□□□ -0.58
SMPDL3A-201ENST00000368440 FBXL17Q9UF56 701 aa11.44□□□□□ -0.58
SMPDL3A-201ENST00000368440 C15orf62A8K5M9 175 aa11.43□□□□□ -0.58
SMPDL3A-201ENST00000368440 RGS13O14921 159 aa11.43□□□□□ -0.58
SMPDL3A-201ENST00000368440 CST7O76096 145 aa11.43□□□□□ -0.58
SMPDL3A-201ENST00000368440 FOLR2P14207 255 aa11.43□□□□□ -0.58
SMPDL3A-201ENST00000368440 EWSR1Q01844 656 aaKnown RBP eCLIP11.43□□□□□ -0.58
SMPDL3A-201ENST00000368440 ALKAL2Q6UX46 152 aa11.43□□□□□ -0.58
SMPDL3A-201ENST00000368440 SLC51BQ86UW2 128 aa11.43□□□□□ -0.58
SMPDL3A-201ENST00000368440 TMEM217Q8N7C4 229 aa11.43□□□□□ -0.58
SMPDL3A-201ENST00000368440 TMEM190Q8WZ59 177 aa11.43□□□□□ -0.58
SMPDL3A-201ENST00000368440 SIGLEC8Q9NYZ4 499 aa11.43□□□□□ -0.58
SMPDL3A-201ENST00000368440 PSENENQ9NZ42 101 aa11.43□□□□□ -0.58
SMPDL3A-201ENST00000368440 ZNF256Q9Y2P7 627 aaPredicted RBP11.43□□□□□ -0.58
SMPDL3A-201ENST00000368440 PRKDCP78527 4128 aaKnown RBP11.43□□□□□ -0.58
SMPDL3A-201ENST00000368440 NUPL2O15504 423 aaKnown RBP11.42□□□□□ -0.58
SMPDL3A-201ENST00000368440 MED6O75586 246 aa11.42□□□□□ -0.58
SMPDL3A-201ENST00000368440 NPBWR1P48145 328 aa11.42□□□□□ -0.58
SMPDL3A-201ENST00000368440 SPANXN5Q5MJ07 72 aa11.42□□□□□ -0.58
SMPDL3A-201ENST00000368440 MRAPQ8TCY5 172 aa11.42□□□□□ -0.58
SMPDL3A-201ENST00000368440 LYRM2Q9NU23 88 aaPredicted RBP11.42□□□□□ -0.58
SMPDL3A-201ENST00000368440 GAR1Q9NY12 217 aaKnown RBP11.42□□□□□ -0.58
SMPDL3A-201ENST00000368440 IZUMO1RA6ND01 250 aa11.42□□□□□ -0.58
SMPDL3A-201ENST00000368440 NDUFA4O00483 81 aa11.42□□□□□ -0.58
SMPDL3A-201ENST00000368440 LY86O95711 162 aa11.42□□□□□ -0.58
SMPDL3A-201ENST00000368440 CBLN1P23435 193 aa11.42□□□□□ -0.58
SMPDL3A-201ENST00000368440 CLINT1Q14677 625 aa11.42□□□□□ -0.58
SMPDL3A-201ENST00000368440 RPL7L1Q6DKI1 246 aaKnown RBP11.42□□□□□ -0.58
SMPDL3A-201ENST00000368440 TMEM252Q8N6L7 170 aa11.42□□□□□ -0.58
SMPDL3A-201ENST00000368440 OR4X1Q8NH49 305 aa11.42□□□□□ -0.58
SMPDL3A-201ENST00000368440 ST8SIA2Q92186 375 aa11.42□□□□□ -0.58
SMPDL3A-201ENST00000368440 RAB40CQ96S21 281 aa11.42□□□□□ -0.58
SMPDL3A-201ENST00000368440 RPS10-NUDT3A0A1W2PQS6 291 aa11.41□□□□□ -0.58
SMPDL3A-201ENST00000368440 ZNF207O43670 478 aaKnown RBP11.41□□□□□ -0.58
SMPDL3A-201ENST00000368440 CLN5O75503 358 aa11.41□□□□□ -0.58
SMPDL3A-201ENST00000368440 RND2P52198 227 aa11.41□□□□□ -0.58
SMPDL3A-201ENST00000368440 CD69Q07108 199 aa11.41□□□□□ -0.58
SMPDL3A-201ENST00000368440 CYTL1Q9NRR1 136 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms