RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 SMIM8Q96KF7 97 aa14.36□□□□□ -0.11
LMNA-204ENST00000368298 CCDC140Q96MF4 163 aa14.36□□□□□ -0.11
LMNA-204ENST00000368298 GINS3Q9BRX5 216 aa14.36□□□□□ -0.11
LMNA-204ENST00000368298 MCRIP2Q9BUT9 160 aaKnown RBP14.36□□□□□ -0.11
LMNA-204ENST00000368298 ENY2Q9NPA8 101 aa14.36□□□□□ -0.11
LMNA-204ENST00000368298 MFSD2BA6NFX1 497 aa14.35□□□□□ -0.11
LMNA-204ENST00000368298 H3BP45 60 aa14.35□□□□□ -0.11
LMNA-204ENST00000368298 CST7O76096 145 aa14.35□□□□□ -0.11
LMNA-204ENST00000368298 TRBV12-3P01733 135 aa14.35□□□□□ -0.11
LMNA-204ENST00000368298 RNASE2P10153 161 aaKnown RBP14.35□□□□□ -0.11
LMNA-204ENST00000368298 SUB1P53999 127 aaKnown RBP eCLIP14.35□□□□□ -0.11
LMNA-204ENST00000368298 TAS2R30P59541 319 aa14.35□□□□□ -0.11
LMNA-204ENST00000368298 CLINT1Q14677 625 aa14.35□□□□□ -0.11
LMNA-204ENST00000368298 SAMD5Q5TGI4 173 aa14.35□□□□□ -0.11
LMNA-204ENST00000368298 ZNF502Q8TBZ5 544 aa14.35□□□□□ -0.11
LMNA-204ENST00000368298 DLX4Q92988 240 aaPredicted RBP14.35□□□□□ -0.11
LMNA-204ENST00000368298 K7EIM0 57 aa14.34□□□□□ -0.11
LMNA-204ENST00000368298 HOXD3P31249 432 aaPredicted RBP14.34□□□□□ -0.11
LMNA-204ENST00000368298 KLF5Q13887 457 aaPredicted RBP14.34□□□□□ -0.11
LMNA-204ENST00000368298 STX12Q86Y82 276 aa14.34□□□□□ -0.11
LMNA-204ENST00000368298 NOTCH3Q9UM47 2321 aa14.33□□□□□ -0.11
LMNA-204ENST00000368298 CEBPZOSA8MTT3 80 aa14.33□□□□□ -0.12
LMNA-204ENST00000368298 TEX46H3BTG2 121 aa14.33□□□□□ -0.12
LMNA-204ENST00000368298 I3L2K1 104 aa14.33□□□□□ -0.12
LMNA-204ENST00000368298 BMPR1BO00238 502 aa14.33□□□□□ -0.12
LMNA-204ENST00000368298 WIPF1O43516 503 aa14.33□□□□□ -0.12
LMNA-204ENST00000368298 SULT1A1P50225 295 aa14.33□□□□□ -0.12
LMNA-204ENST00000368298 SULT1A2P50226 295 aa14.33□□□□□ -0.12
LMNA-204ENST00000368298 SLURP1P55000 103 aa14.33□□□□□ -0.12
LMNA-204ENST00000368298 OR1S2Q8NGQ3 325 aa14.33□□□□□ -0.12
LMNA-204ENST00000368298 OR5C1Q8NGR4 320 aa14.33□□□□□ -0.12
LMNA-204ENST00000368298 HEYLQ9NQ87 328 aaPredicted RBP14.33□□□□□ -0.12
LMNA-204ENST00000368298 ZNF705EA8MWA4 302 aaPredicted RBP14.32□□□□□ -0.12
LMNA-204ENST00000368298 CORTO00230 105 aa14.32□□□□□ -0.12
LMNA-204ENST00000368298 OVOL1O14753 267 aa14.32□□□□□ -0.12
LMNA-204ENST00000368298 IGLL1P15814 213 aa14.32□□□□□ -0.12
LMNA-204ENST00000368298 ZNF266Q14584 549 aa14.32□□□□□ -0.12
LMNA-204ENST00000368298 C2orf83Q53S99 150 aa14.32□□□□□ -0.12
LMNA-204ENST00000368298 TMEM217Q8N7C4 229 aa14.32□□□□□ -0.12
LMNA-204ENST00000368298 HIPK2Q9H2X6 1198 aa14.32□□□□□ -0.12
LMNA-204ENST00000368298 PLA2G2EQ9NZK7 142 aa14.32□□□□□ -0.12
LMNA-204ENST00000368298 CLEC3BP05452 202 aa14.31□□□□□ -0.12
LMNA-204ENST00000368298 SEC11BP0C7V7 166 aa14.31□□□□□ -0.12
LMNA-204ENST00000368298 FCGR2BP31994 310 aaPredicted RBP14.31□□□□□ -0.12
LMNA-204ENST00000368298 OXLD1Q5BKU9 147 aa14.31□□□□□ -0.12
LMNA-204ENST00000368298 TOR2AQ5JU69 321 aa14.31□□□□□ -0.12
LMNA-204ENST00000368298 KPRPQ5T749 579 aaPredicted RBP14.31□□□□□ -0.12
LMNA-204ENST00000368298 CLEC19AQ6UXS0 136 aa14.31□□□□□ -0.12
LMNA-204ENST00000368298 HSD17B11Q8NBQ5 300 aa14.31□□□□□ -0.12
LMNA-204ENST00000368298 DTD1Q8TEA8 209 aa14.31□□□□□ -0.12
LMNA-204ENST00000368298 ATP5SQ99766 215 aa14.31□□□□□ -0.12
LMNA-204ENST00000368298 GPR61Q9BZJ8 451 aa14.31□□□□□ -0.12
LMNA-204ENST00000368298 C21orf62Q9NYP8 219 aa14.31□□□□□ -0.12
LMNA-204ENST00000368298 S4R3C0 116 aa14.31□□□□□ -0.12
LMNA-204ENST00000368298 G3V4G9 280 aa14.31□□□□□ -0.12
LMNA-204ENST00000368298 GGCTO75223 188 aaKnown RBP14.31□□□□□ -0.12
LMNA-204ENST00000368298 IGHV3-23P01764 117 aa14.31□□□□□ -0.12
LMNA-204ENST00000368298 METTL15P1P0C7V9 234 aa14.31□□□□□ -0.12
LMNA-204ENST00000368298 SPP1P10451 314 aa14.31□□□□□ -0.12
LMNA-204ENST00000368298 ATP5IP56385 69 aaPredicted RBP14.31□□□□□ -0.12
LMNA-204ENST00000368298 SPANXN5Q5MJ07 72 aa14.31□□□□□ -0.12
LMNA-204ENST00000368298 SLC24A4Q8NFF2 622 aa14.31□□□□□ -0.12
LMNA-204ENST00000368298 SAT2Q96F10 170 aaPredicted RBP14.31□□□□□ -0.12
LMNA-204ENST00000368298 MISP3Q96FF7 219 aa14.31□□□□□ -0.12
LMNA-204ENST00000368298 TXN2Q99757 166 aa14.31□□□□□ -0.12
LMNA-204ENST00000368298 F8W735 103 aaPredicted RBP14.3□□□□□ -0.12
LMNA-204ENST00000368298 DFFBO76075 338 aa14.3□□□□□ -0.12
LMNA-204ENST00000368298 MT-CO2P00403 227 aa14.3□□□□□ -0.12
LMNA-204ENST00000368298 ARL3P36405 182 aa14.3□□□□□ -0.12
LMNA-204ENST00000368298 RPEL1Q2QD12 228 aa14.3□□□□□ -0.12
LMNA-204ENST00000368298 GPHB5Q86YW7 130 aa14.3□□□□□ -0.12
LMNA-204ENST00000368298 SH3BGRL3Q9H299 93 aa14.3□□□□□ -0.12
LMNA-204ENST00000368298 GAR1Q9NY12 217 aaKnown RBP14.3□□□□□ -0.12
LMNA-204ENST00000368298 PPP5D1E7EU14 171 aa14.29□□□□□ -0.12
LMNA-204ENST00000368298 LY86O95711 162 aa14.29□□□□□ -0.12
LMNA-204ENST00000368298 INSL3P51460 131 aa14.29□□□□□ -0.12
LMNA-204ENST00000368298 ACSM6Q6P461 480 aa14.29□□□□□ -0.12
LMNA-204ENST00000368298 SPSB3Q6PJ21 355 aa14.29□□□□□ -0.12
LMNA-204ENST00000368298 HAPLN4Q86UW8 402 aa14.29□□□□□ -0.12
LMNA-204ENST00000368298 C1QL4Q86Z23 238 aa14.29□□□□□ -0.12
LMNA-204ENST00000368298 RNASEH2CQ8TDP1 164 aaKnown RBP14.29□□□□□ -0.12
LMNA-204ENST00000368298 TMEM170AQ8WVE7 144 aa14.29□□□□□ -0.12
LMNA-204ENST00000368298 CIB3Q96Q77 187 aaPredicted RBP14.29□□□□□ -0.12
LMNA-204ENST00000368298 OR4C12Q96R67 309 aa14.29□□□□□ -0.12
LMNA-204ENST00000368298 NOTCH1P46531 2555 aa14.29□□□□□ -0.12
LMNA-204ENST00000368298 ATP6V0CP27449 155 aa14.28□□□□□ -0.12
LMNA-204ENST00000368298 MFAP4P55083 255 aa14.28□□□□□ -0.12
LMNA-204ENST00000368298 BLOC1S1P78537 153 aa14.28□□□□□ -0.12
LMNA-204ENST00000368298 ARL16Q0P5N6 197 aa14.28□□□□□ -0.12
LMNA-204ENST00000368298 BEAN1Q3B7T3 259 aa14.28□□□□□ -0.12
LMNA-204ENST00000368298 C9orf66Q5T8R8 295 aa14.28□□□□□ -0.12
LMNA-204ENST00000368298 TMEM14EPQ6UXP3 125 aa14.28□□□□□ -0.12
LMNA-204ENST00000368298 EIF4E3Q8N5X7 224 aaKnown RBP14.28□□□□□ -0.12
LMNA-204ENST00000368298 SEC14L6B5MCN3 397 aa14.27□□□□□ -0.12
LMNA-204ENST00000368298 LGALS9O00182 355 aa14.27□□□□□ -0.12
LMNA-204ENST00000368298 TGOLN2O43493 480 aa14.27□□□□□ -0.12
LMNA-204ENST00000368298 IFNA5P01569 189 aa14.27□□□□□ -0.12
LMNA-204ENST00000368298 NPY1RP25929 384 aa14.27□□□□□ -0.12
LMNA-204ENST00000368298 GPR183P32249 361 aa14.27□□□□□ -0.12
LMNA-204ENST00000368298 SYNJ2BPP57105 145 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms