RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 CD7P09564 240 aa9.53□□□□□ -0.88
SYNE1-204ENST00000367248 KIF26BQ2KJY2 2108 aa9.53□□□□□ -0.88
SYNE1-204ENST00000367248 OR10W1Q8NGF6 305 aa9.53□□□□□ -0.88
SYNE1-204ENST00000367248 UBE2E2Q96LR5 201 aa9.53□□□□□ -0.88
SYNE1-204ENST00000367248 ARFGEF3Q5TH69 2177 aa9.53□□□□□ -0.88
SYNE1-204ENST00000367248 IGHV1-3A0A0C4DH29 117 aa9.52□□□□□ -0.88
SYNE1-204ENST00000367248 PPP1R17O96001 155 aa9.52□□□□□ -0.88
SYNE1-204ENST00000367248 FBLN7Q53RD9 439 aa9.52□□□□□ -0.88
SYNE1-204ENST00000367248 Q6P435 159 aa9.52□□□□□ -0.88
SYNE1-204ENST00000367248 FAM209BQ5JX69 171 aa9.52□□□□□ -0.88
SYNE1-204ENST00000367248 RSPO3Q9BXY4 272 aaPredicted RBP9.52□□□□□ -0.88
SYNE1-204ENST00000367248 VENTXO95231 258 aa9.52□□□□□ -0.89
SYNE1-204ENST00000367248 PAX8Q06710 450 aa9.52□□□□□ -0.89
SYNE1-204ENST00000367248 HSPB8Q9UJY1 196 aa9.52□□□□□ -0.89
SYNE1-204ENST00000367248 ZNF257Q9Y2Q1 563 aa9.52□□□□□ -0.89
SYNE1-204ENST00000367248 SIP14410 1827 aa9.52□□□□□ -0.89
SYNE1-204ENST00000367248 NDUFS7O75251 213 aa9.52□□□□□ -0.89
SYNE1-204ENST00000367248 ASCL4Q6XD76 172 aa9.52□□□□□ -0.89
SYNE1-204ENST00000367248 RNF114Q9Y508 228 aa9.52□□□□□ -0.89
SYNE1-204ENST00000367248 SRSF4Q08170 494 aaKnown RBP9.52□□□□□ -0.89
SYNE1-204ENST00000367248 C15orf32Q32M92 178 aa9.52□□□□□ -0.89
SYNE1-204ENST00000367248 RNF126Q9BV68 326 aa9.52□□□□□ -0.89
SYNE1-204ENST00000367248 PTPN13Q12923 2485 aa9.52□□□□□ -0.89
SYNE1-204ENST00000367248 MEIG1Q5JSS6 88 aa9.52□□□□□ -0.89
SYNE1-204ENST00000367248 DEFB104AQ8WTQ1 72 aa9.52□□□□□ -0.89
SYNE1-204ENST00000367248 PLA2G5P39877 138 aa9.51□□□□□ -0.89
SYNE1-204ENST00000367248 PEX7O00628 323 aa9.51□□□□□ -0.89
SYNE1-204ENST00000367248 C1orf122Q6ZSJ8 110 aa9.51□□□□□ -0.89
SYNE1-204ENST00000367248 C5orf24Q7Z6I8 188 aa9.51□□□□□ -0.89
SYNE1-204ENST00000367248 NDUFS8O00217 210 aa9.51□□□□□ -0.89
SYNE1-204ENST00000367248 QRFPP83859 136 aa9.51□□□□□ -0.89
SYNE1-204ENST00000367248 SAMD13Q5VXD3 122 aa9.51□□□□□ -0.89
SYNE1-204ENST00000367248 CXorf65A6NEN9 183 aa9.51□□□□□ -0.89
SYNE1-204ENST00000367248 PRSS2P07478 247 aa9.51□□□□□ -0.89
SYNE1-204ENST00000367248 ZNF256Q9Y2P7 627 aaPredicted RBP9.51□□□□□ -0.89
SYNE1-204ENST00000367248 IGHV3-53P01767 116 aa9.51□□□□□ -0.89
SYNE1-204ENST00000367248 TCF24Q7RTU0 167 aa9.51□□□□□ -0.89
SYNE1-204ENST00000367248 OR4D5Q8NGN0 318 aa9.51□□□□□ -0.89
SYNE1-204ENST00000367248 SLC50A1Q9BRV3 221 aa9.51□□□□□ -0.89
SYNE1-204ENST00000367248 PRO1933Q9H354 126 aa9.51□□□□□ -0.89
SYNE1-204ENST00000367248 GEMIN7Q9H840 131 aaKnown RBP9.51□□□□□ -0.89
SYNE1-204ENST00000367248 ZNF688P0C7X2 276 aa9.5□□□□□ -0.89
SYNE1-204ENST00000367248 NMUP48645 174 aa9.5□□□□□ -0.89
SYNE1-204ENST00000367248 OR1P1Q8NH06 330 aa9.5□□□□□ -0.89
SYNE1-204ENST00000367248 ZNF524Q96C55 264 aa9.5□□□□□ -0.89
SYNE1-204ENST00000367248 TRGC2P03986 189 aa9.5□□□□□ -0.89
SYNE1-204ENST00000367248 PRTN3P24158 256 aa9.5□□□□□ -0.89
SYNE1-204ENST00000367248 ASIPP42127 132 aa9.5□□□□□ -0.89
SYNE1-204ENST00000367248 RNF151Q2KHN1 245 aa9.5□□□□□ -0.89
SYNE1-204ENST00000367248 FREM3P0C091 2139 aa9.5□□□□□ -0.89
SYNE1-204ENST00000367248 OR5AN1Q8NGI8 311 aa9.5□□□□□ -0.89
SYNE1-204ENST00000367248 SLC25A48Q6ZT89 311 aaKnown RBP9.5□□□□□ -0.89
SYNE1-204ENST00000367248 REG4Q9BYZ8 158 aa9.5□□□□□ -0.89
SYNE1-204ENST00000367248 ACTL10Q5JWF8 245 aa9.5□□□□□ -0.89
SYNE1-204ENST00000367248 TMEM101Q96IK0 257 aa9.5□□□□□ -0.89
SYNE1-204ENST00000367248 PHF3Q92576 2039 aaKnown RBP9.5□□□□□ -0.89
SYNE1-204ENST00000367248 TEX38Q6PEX7 206 aa9.49□□□□□ -0.89
SYNE1-204ENST00000367248 ZNRD1Q9P1U0 126 aa9.49□□□□□ -0.89
SYNE1-204ENST00000367248 TRBV20OR9-2A0A075B6H5 130 aa9.49□□□□□ -0.89
SYNE1-204ENST00000367248 ATP5G3P48201 142 aa9.49□□□□□ -0.89
SYNE1-204ENST00000367248 VGLL1Q99990 258 aa9.49□□□□□ -0.89
SYNE1-204ENST00000367248 KIAA2026Q5HYC2 2103 aa9.49□□□□□ -0.89
SYNE1-204ENST00000367248 SCN8AQ9UQD0 1980 aa9.49□□□□□ -0.89
SYNE1-204ENST00000367248 RPL15P61313 204 aaKnown RBP9.49□□□□□ -0.89
SYNE1-204ENST00000367248 OR13C6PQ8NH95 151 aa9.49□□□□□ -0.89
SYNE1-204ENST00000367248 ZNF581Q9P0T4 197 aa9.49□□□□□ -0.89
SYNE1-204ENST00000367248 PPIFP30405 207 aaKnown RBP9.49□□□□□ -0.89
SYNE1-204ENST00000367248 CIARTQ8N365 385 aaPredicted RBP9.49□□□□□ -0.89
SYNE1-204ENST00000367248 MAP1LC3AQ9H492 121 aa9.49□□□□□ -0.89
SYNE1-204ENST00000367248 IGHV3-73A0A0B4J1V6 119 aa9.49□□□□□ -0.89
SYNE1-204ENST00000367248 C5orf64Q2M2E5 130 aa9.49□□□□□ -0.89
SYNE1-204ENST00000367248 SFRP2Q96HF1 295 aa9.49□□□□□ -0.89
SYNE1-204ENST00000367248 PSCAO43653 123 aa9.49□□□□□ -0.89
SYNE1-204ENST00000367248 SYNJ2BPP57105 145 aa9.49□□□□□ -0.89
SYNE1-204ENST00000367248 SUPT4H1P63272 117 aaKnown RBP9.49□□□□□ -0.89
SYNE1-204ENST00000367248 IGF2-ASQ6U949 168 aa9.49□□□□□ -0.89
SYNE1-204ENST00000367248 Q6ZS49 121 aa9.49□□□□□ -0.89
SYNE1-204ENST00000367248 MRPL18Q9H0U6 180 aaKnown RBP9.49□□□□□ -0.89
SYNE1-204ENST00000367248 IGKV1-5P01602 117 aa9.48□□□□□ -0.89
SYNE1-204ENST00000367248 CD55P08174 381 aa9.48□□□□□ -0.89
SYNE1-204ENST00000367248 Q9H3A6 140 aa9.48□□□□□ -0.89
SYNE1-204ENST00000367248 SRCAPQ6ZRS2 3230 aa9.48□□□□□ -0.89
SYNE1-204ENST00000367248 M0R143 59 aa9.48□□□□□ -0.89
SYNE1-204ENST00000367248 J3QR89 54 aa9.48□□□□□ -0.89
SYNE1-204ENST00000367248 SRP19P09132 144 aaKnown RBP9.48□□□□□ -0.89
SYNE1-204ENST00000367248 Q6ZR03 302 aa9.48□□□□□ -0.89
SYNE1-204ENST00000367248 KIR2DL4Q99706 377 aa9.48□□□□□ -0.89
SYNE1-204ENST00000367248 FBLL1A6NHQ2 334 aaKnown RBP9.48□□□□□ -0.89
SYNE1-204ENST00000367248 TAS2R60P59551 318 aa9.48□□□□□ -0.89
SYNE1-204ENST00000367248 KIAA1644Q3SXP7 199 aa9.48□□□□□ -0.89
SYNE1-204ENST00000367248 TGIF2-C20orf24A0A0A6YYL0 155 aa9.48□□□□□ -0.89
SYNE1-204ENST00000367248 TCF21O43680 179 aa9.48□□□□□ -0.89
SYNE1-204ENST00000367248 YLPM1P49750 1951 aaKnown RBP9.48□□□□□ -0.89
SYNE1-204ENST00000367248 H0YJW9 148 aa9.47□□□□□ -0.89
SYNE1-204ENST00000367248 SRIP30626 198 aa9.47□□□□□ -0.89
SYNE1-204ENST00000367248 OR9G4Q8NGQ1 327 aa9.47□□□□□ -0.89
SYNE1-204ENST00000367248 Q8TCH9 128 aa9.47□□□□□ -0.89
SYNE1-204ENST00000367248 OTORQ9NRC9 128 aa9.47□□□□□ -0.89
SYNE1-204ENST00000367248 BUB1B-PAK6H3BSN5 160 aa9.47□□□□□ -0.89
SYNE1-204ENST00000367248 LINC00205P59089 165 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms