RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 TCRBV4S1A1TA0A5B7 111 aa14.67□□□□□ -0.06
CHMP4A-201ENST00000347519 PPP5D1E7EU14 171 aa14.67□□□□□ -0.06
CHMP4A-201ENST00000347519 TAAR5O14804 337 aa14.67□□□□□ -0.06
CHMP4A-201ENST00000347519 CLEC3BP05452 202 aa14.67□□□□□ -0.06
CHMP4A-201ENST00000347519 IGLC1P0CG04 106 aa14.67□□□□□ -0.06
CHMP4A-201ENST00000347519 FCGR2BP31994 310 aaPredicted RBP14.67□□□□□ -0.06
CHMP4A-201ENST00000347519 TIGITQ495A1 244 aa14.67□□□□□ -0.06
CHMP4A-201ENST00000347519 UBE2E2Q96LR5 201 aa14.67□□□□□ -0.06
CHMP4A-201ENST00000347519 MGST2Q99735 147 aa14.67□□□□□ -0.06
CHMP4A-201ENST00000347519 CHRDL1Q9BU40 450 aa14.67□□□□□ -0.06
CHMP4A-201ENST00000347519 WDR61Q9GZS3 305 aaKnown RBP14.67□□□□□ -0.06
CHMP4A-201ENST00000347519 COL6A5A8TX70 2615 aa14.66□□□□□ -0.06
CHMP4A-201ENST00000347519 IGKV1-17P01599 117 aa14.66□□□□□ -0.06
CHMP4A-201ENST00000347519 CTSGP08311 255 aa14.66□□□□□ -0.06
CHMP4A-201ENST00000347519 FGF7P21781 194 aa14.66□□□□□ -0.06
CHMP4A-201ENST00000347519 ADMP35318 185 aa14.66□□□□□ -0.06
CHMP4A-201ENST00000347519 NPBWR1P48145 328 aa14.66□□□□□ -0.06
CHMP4A-201ENST00000347519 RUNX1Q01196 453 aa14.66□□□□□ -0.06
CHMP4A-201ENST00000347519 ATRQ13535 2644 aa14.66□□□□□ -0.06
CHMP4A-201ENST00000347519 KHDC1LQ5JSQ8 128 aa14.66□□□□□ -0.06
CHMP4A-201ENST00000347519 BTNL8Q6UX41 500 aa14.66□□□□□ -0.06
CHMP4A-201ENST00000347519 TMEM182Q6ZP80 229 aaPredicted RBP14.66□□□□□ -0.06
CHMP4A-201ENST00000347519 TXN2Q99757 166 aa14.66□□□□□ -0.06
CHMP4A-201ENST00000347519 ADARB2-AS1A8MUL3 147 aa14.65□□□□□ -0.06
CHMP4A-201ENST00000347519 GNG7O60262 68 aa14.65□□□□□ -0.06
CHMP4A-201ENST00000347519 LGALS1P09382 135 aaKnown RBP14.65□□□□□ -0.06
CHMP4A-201ENST00000347519 OR10J1P30954 320 aa14.65□□□□□ -0.06
CHMP4A-201ENST00000347519 CDX1P47902 265 aaPredicted RBP14.65□□□□□ -0.06
CHMP4A-201ENST00000347519 ZNF90Q03938 601 aa14.65□□□□□ -0.06
CHMP4A-201ENST00000347519 TMEM158Q8WZ71 300 aa14.65□□□□□ -0.06
CHMP4A-201ENST00000347519 ZNF471Q9BX82 626 aaPredicted RBP14.65□□□□□ -0.06
CHMP4A-201ENST00000347519 A0A1W2PRX2 142 aa14.64□□□□□ -0.07
CHMP4A-201ENST00000347519 I3L521 148 aa14.64□□□□□ -0.07
CHMP4A-201ENST00000347519 IFNA5P01569 189 aa14.64□□□□□ -0.07
CHMP4A-201ENST00000347519 GATA2P23769 480 aaPredicted RBP14.64□□□□□ -0.07
CHMP4A-201ENST00000347519 TEPPQ6URK8 271 aa14.64□□□□□ -0.07
CHMP4A-201ENST00000347519 HSD17B11Q8NBQ5 300 aa14.64□□□□□ -0.07
CHMP4A-201ENST00000347519 RSG1Q9BU20 258 aa14.64□□□□□ -0.07
CHMP4A-201ENST00000347519 GGTLC1Q9BX51 225 aa14.64□□□□□ -0.07
CHMP4A-201ENST00000347519 PARD6GQ9BYG4 376 aaPredicted RBP14.64□□□□□ -0.07
CHMP4A-201ENST00000347519 ARV1Q9H2C2 271 aa14.64□□□□□ -0.07
CHMP4A-201ENST00000347519 IGHV3-35A0A0C4DH35 117 aa14.63□□□□□ -0.07
CHMP4A-201ENST00000347519 ZFP92A6NM28 416 aa14.63□□□□□ -0.07
CHMP4A-201ENST00000347519 BMPR1BO00238 502 aa14.63□□□□□ -0.07
CHMP4A-201ENST00000347519 AGPAT2O15120 278 aa14.63□□□□□ -0.07
CHMP4A-201ENST00000347519 TGOLN2O43493 480 aa14.63□□□□□ -0.07
CHMP4A-201ENST00000347519 ZNF266Q14584 549 aa14.63□□□□□ -0.07
CHMP4A-201ENST00000347519 DEFB136Q30KP8 78 aa14.63□□□□□ -0.07
CHMP4A-201ENST00000347519 KLHL30-AS1Q8NEE0 82 aa14.63□□□□□ -0.07
CHMP4A-201ENST00000347519 TRGV9Q99603 122 aa14.63□□□□□ -0.07
CHMP4A-201ENST00000347519 SH3BGRL3Q9H299 93 aa14.63□□□□□ -0.07
CHMP4A-201ENST00000347519 PEF1Q9UBV8 284 aaKnown RBP14.63□□□□□ -0.07
CHMP4A-201ENST00000347519 BORCS7-ASMTA0A0B4J1R7 106 aa14.62□□□□□ -0.07
CHMP4A-201ENST00000347519 ATP6V0CP27449 155 aa14.62□□□□□ -0.07
CHMP4A-201ENST00000347519 CYP2G1PQ6ZSU1 146 aa14.62□□□□□ -0.07
CHMP4A-201ENST00000347519 C8orf86Q6ZUL3 223 aa14.62□□□□□ -0.07
CHMP4A-201ENST00000347519 SCGB1C1Q8TD33 95 aa14.62□□□□□ -0.07
CHMP4A-201ENST00000347519 GINS3Q9BRX5 216 aa14.62□□□□□ -0.07
CHMP4A-201ENST00000347519 NPCDR1Q9BY65 106 aa14.62□□□□□ -0.07
CHMP4A-201ENST00000347519 SLC45A2Q9UMX9 530 aa14.62□□□□□ -0.07
CHMP4A-201ENST00000347519 TSSC4Q9Y5U2 329 aaPredicted RBP14.62□□□□□ -0.07
CHMP4A-201ENST00000347519 FBN3Q75N90 2809 aa14.62□□□□□ -0.07
CHMP4A-201ENST00000347519 TENM1Q9UKZ4 2725 aa14.62□□□□□ -0.07
CHMP4A-201ENST00000347519 IGHV4OR15-8A0A075B7B6 117 aa14.61□□□□□ -0.07
CHMP4A-201ENST00000347519 A0A087WW49 117 aa14.61□□□□□ -0.07
CHMP4A-201ENST00000347519 JTBO76095 146 aa14.61□□□□□ -0.07
CHMP4A-201ENST00000347519 ARL3P36405 182 aa14.61□□□□□ -0.07
CHMP4A-201ENST00000347519 CAMLGP49069 296 aa14.61□□□□□ -0.07
CHMP4A-201ENST00000347519 MIC13Q5XKP0 118 aa14.61□□□□□ -0.07
CHMP4A-201ENST00000347519 C4orf3Q8WVX3 66 aa14.61□□□□□ -0.07
CHMP4A-201ENST00000347519 DUX3Q96PT4 197 aa14.61□□□□□ -0.07
CHMP4A-201ENST00000347519 ATP6V0BQ99437 205 aa14.61□□□□□ -0.07
CHMP4A-201ENST00000347519 TRAV30A0A087WSZ9 112 aa14.6□□□□□ -0.07
CHMP4A-201ENST00000347519 NUDT19A8MXV4 375 aa14.6□□□□□ -0.07
CHMP4A-201ENST00000347519 OR2C1O95371 312 aa14.6□□□□□ -0.07
CHMP4A-201ENST00000347519 LINC00869P0C866 280 aa14.6□□□□□ -0.07
CHMP4A-201ENST00000347519 SLC51BQ86UW2 128 aa14.6□□□□□ -0.07
CHMP4A-201ENST00000347519 BPIFCQ8NFQ6 507 aa14.6□□□□□ -0.07
CHMP4A-201ENST00000347519 STOML3Q8TAV4 291 aa14.6□□□□□ -0.07
CHMP4A-201ENST00000347519 PLA2G2EQ9NZK7 142 aa14.6□□□□□ -0.07
CHMP4A-201ENST00000347519 NUPL2O15504 423 aaKnown RBP14.6□□□□□ -0.07
CHMP4A-201ENST00000347519 MPDU1O75352 247 aa14.6□□□□□ -0.07
CHMP4A-201ENST00000347519 CFDP00746 253 aaPredicted RBP14.6□□□□□ -0.07
CHMP4A-201ENST00000347519 PSG1P11464 419 aa14.6□□□□□ -0.07
CHMP4A-201ENST00000347519 NSUN5P1Q3KNT7 163 aa14.6□□□□□ -0.07
CHMP4A-201ENST00000347519 ST8SIA2Q92186 375 aa14.6□□□□□ -0.07
CHMP4A-201ENST00000347519 CITED1Q99966 193 aa14.6□□□□□ -0.07
CHMP4A-201ENST00000347519 GAR1Q9NY12 217 aaKnown RBP14.6□□□□□ -0.07
CHMP4A-201ENST00000347519 TOMM40O96008 361 aa14.59□□□□□ -0.07
CHMP4A-201ENST00000347519 HSPB1P04792 205 aaKnown RBP14.59□□□□□ -0.07
CHMP4A-201ENST00000347519 YPEL3P61236 119 aaPredicted RBP14.59□□□□□ -0.07
CHMP4A-201ENST00000347519 PRR20EP86478 221 aa14.59□□□□□ -0.07
CHMP4A-201ENST00000347519 PRR20CP86479 221 aa14.59□□□□□ -0.07
CHMP4A-201ENST00000347519 PRR20DP86480 221 aa14.59□□□□□ -0.07
CHMP4A-201ENST00000347519 PRR20BP86481 221 aa14.59□□□□□ -0.07
CHMP4A-201ENST00000347519 PRR20AP86496 221 aa14.59□□□□□ -0.07
CHMP4A-201ENST00000347519 SPSB3Q6PJ21 355 aa14.59□□□□□ -0.07
CHMP4A-201ENST00000347519 RAX2Q96IS3 184 aa14.59□□□□□ -0.07
CHMP4A-201ENST00000347519 SLC25A32Q9H2D1 315 aa14.59□□□□□ -0.07
CHMP4A-201ENST00000347519 PXMP4Q9Y6I8 212 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms