RNA–Protein interactions for RNA: ENST00000341753.10

TRIM28-202, Transcript of tripartite motif containing 28, humanhuman

TSL 1 (best) BASIC

Gene TRIM28, Length 2,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-202ENST00000341753 RNF151Q2KHN1 245 aa18.13■□□□□ 0.49
TRIM28-202ENST00000341753 C2orf83Q53S99 150 aa18.13■□□□□ 0.49
TRIM28-202ENST00000341753 BSNQ9UPA5 3926 aa18.12■□□□□ 0.49
TRIM28-202ENST00000341753 NAV3Q8IVL0 2385 aa18.12■□□□□ 0.49
TRIM28-202ENST00000341753 PSMB11A5LHX3 300 aa18.12■□□□□ 0.49
TRIM28-202ENST00000341753 TOMM40O96008 361 aa18.12■□□□□ 0.49
TRIM28-202ENST00000341753 PNKDQ8N490 385 aa18.12■□□□□ 0.49
TRIM28-202ENST00000341753 WIPF2Q8TF74 440 aaPredicted RBP18.12■□□□□ 0.49
TRIM28-202ENST00000341753 C22orf15Q8WYQ4 148 aa18.12■□□□□ 0.49
TRIM28-202ENST00000341753 MCRIP2Q9BUT9 160 aaKnown RBP18.12■□□□□ 0.49
TRIM28-202ENST00000341753 ZNF318Q5VUA4 2279 aa18.12■□□□□ 0.49
TRIM28-202ENST00000341753 FBLN7Q53RD9 439 aa18.12■□□□□ 0.49
TRIM28-202ENST00000341753 SEM1Q6ZVN7 128 aa18.12■□□□□ 0.49
TRIM28-202ENST00000341753 BLNKQ8WV28 456 aa18.12■□□□□ 0.49
TRIM28-202ENST00000341753 ADGRG4Q8IZF6 3080 aa18.11■□□□□ 0.49
TRIM28-202ENST00000341753 hDV102S1A0JD36 115 aa18.11■□□□□ 0.49
TRIM28-202ENST00000341753 PRR33A8MZF0 331 aa18.11■□□□□ 0.49
TRIM28-202ENST00000341753 REG1BP48304 166 aa18.11■□□□□ 0.49
TRIM28-202ENST00000341753 FAM216BQ8N7L0 139 aa18.11■□□□□ 0.49
TRIM28-202ENST00000341753 CCL13Q99616 98 aa18.11■□□□□ 0.49
TRIM28-202ENST00000341753 ZNF257Q9Y2Q1 563 aa18.11■□□□□ 0.49
TRIM28-202ENST00000341753 PIEZO2Q9H5I5 2752 aa18.11■□□□□ 0.49
TRIM28-202ENST00000341753 CA7P43166 264 aa18.11■□□□□ 0.49
TRIM28-202ENST00000341753 RTL8BQ17RB0 113 aa18.11■□□□□ 0.49
TRIM28-202ENST00000341753 C10orf55Q5SWW7 151 aa18.11■□□□□ 0.49
TRIM28-202ENST00000341753 PATE2Q6UY27 113 aa18.11■□□□□ 0.49
TRIM28-202ENST00000341753 SARAFQ96BY9 339 aa18.11■□□□□ 0.49
TRIM28-202ENST00000341753 IGLV1-44P01699 117 aa18.1■□□□□ 0.49
TRIM28-202ENST00000341753 POU2AF1Q16633 256 aa18.1■□□□□ 0.49
TRIM28-202ENST00000341753 MPV17L2Q567V2 206 aa18.1■□□□□ 0.49
TRIM28-202ENST00000341753 MUC15Q8N387 334 aa18.1■□□□□ 0.49
TRIM28-202ENST00000341753 OR4C5Q8NGB2 326 aa18.1■□□□□ 0.49
TRIM28-202ENST00000341753 IGHV1-69-2A0A0G2JMI3 117 aa18.1■□□□□ 0.49
TRIM28-202ENST00000341753 TNFSF4P23510 183 aa18.1■□□□□ 0.49
TRIM28-202ENST00000341753 KLF5Q13887 457 aaPredicted RBP18.1■□□□□ 0.49
TRIM28-202ENST00000341753 VAMP3Q15836 100 aa18.1■□□□□ 0.49
TRIM28-202ENST00000341753 C10orf113Q5VZT2 155 aa18.1■□□□□ 0.49
TRIM28-202ENST00000341753 IGFL2Q6UWQ7 119 aa18.1■□□□□ 0.49
TRIM28-202ENST00000341753 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.1■□□□□ 0.49
TRIM28-202ENST00000341753 OR5B3Q8NH48 314 aa18.1■□□□□ 0.49
TRIM28-202ENST00000341753 NPIPB3Q92617 1050 aa18.1■□□□□ 0.49
TRIM28-202ENST00000341753 ADTRPQ96IZ2 230 aa18.1■□□□□ 0.49
TRIM28-202ENST00000341753 C19orf24Q9BVV8 132 aa18.1■□□□□ 0.49
TRIM28-202ENST00000341753 OR4C46A6NHA9 309 aa18.09■□□□□ 0.49
TRIM28-202ENST00000341753 H3BTX0 84 aa18.09■□□□□ 0.49
TRIM28-202ENST00000341753 MZT1Q08AG7 82 aa18.09■□□□□ 0.49
TRIM28-202ENST00000341753 MRPL32Q9BYC8 188 aaKnown RBP18.09■□□□□ 0.49
TRIM28-202ENST00000341753 RNF24Q9Y225 148 aa18.09■□□□□ 0.49
TRIM28-202ENST00000341753 ROS1P08922 2347 aa18.09■□□□□ 0.49
TRIM28-202ENST00000341753 H0Y8G0 127 aa18.09■□□□□ 0.49
TRIM28-202ENST00000341753 FNDC4Q9H6D8 234 aaPredicted RBP18.09■□□□□ 0.49
TRIM28-202ENST00000341753 MRPL36Q9P0J6 103 aaKnown RBP18.09■□□□□ 0.49
TRIM28-202ENST00000341753 K7EM74 188 aa18.08■□□□□ 0.49
TRIM28-202ENST00000341753 M0R1B8 84 aa18.08■□□□□ 0.49
TRIM28-202ENST00000341753 ZNF137PP52743 207 aa18.08■□□□□ 0.49
TRIM28-202ENST00000341753 LINC00322Q6ZN03 302 aaPredicted RBP18.08■□□□□ 0.49
TRIM28-202ENST00000341753 OR1L8Q8NGR8 309 aa18.08■□□□□ 0.49
TRIM28-202ENST00000341753 ZNF596Q8TC21 504 aa18.08■□□□□ 0.49
TRIM28-202ENST00000341753 TMEM70Q9BUB7 260 aa18.08■□□□□ 0.49
TRIM28-202ENST00000341753 TIMM8BQ9Y5J9 83 aaPredicted RBP18.08■□□□□ 0.49
TRIM28-202ENST00000341753 FAM231DQ6ZW35 169 aa18.08■□□□□ 0.48
TRIM28-202ENST00000341753 ZNF71Q9NQZ8 489 aaPredicted RBP18.08■□□□□ 0.48
TRIM28-202ENST00000341753 FAM120AOSQ5T036 256 aa18.07■□□□□ 0.48
TRIM28-202ENST00000341753 RASL11AQ6T310 242 aa18.07■□□□□ 0.48
TRIM28-202ENST00000341753 SSX8Q7RTT4 187 aa18.07■□□□□ 0.48
TRIM28-202ENST00000341753 HARBI1Q96MB7 349 aa18.07■□□□□ 0.48
TRIM28-202ENST00000341753 MRPL20Q9BYC9 149 aaKnown RBP18.07■□□□□ 0.48
TRIM28-202ENST00000341753 PROCRQ9UNN8 238 aa18.07■□□□□ 0.48
TRIM28-202ENST00000341753 ANKRD11Q6UB99 2663 aaPredicted RBP18.07■□□□□ 0.48
TRIM28-202ENST00000341753 WASHC3Q9Y3C0 194 aa18.07■□□□□ 0.48
TRIM28-202ENST00000341753 DSCAML1Q8TD84 2053 aa18.07■□□□□ 0.48
TRIM28-202ENST00000341753 PLCE1Q9P212 2302 aa18.07■□□□□ 0.48
TRIM28-202ENST00000341753 ITGB1BP1O14713 200 aa18.07■□□□□ 0.48
TRIM28-202ENST00000341753 LHBP01229 141 aa18.07■□□□□ 0.48
TRIM28-202ENST00000341753 BHLHA15Q7RTS1 189 aaPredicted RBP18.07■□□□□ 0.48
TRIM28-202ENST00000341753 FXYD5Q96DB9 178 aa18.07■□□□□ 0.48
TRIM28-202ENST00000341753 GAL3ST2Q9H3Q3 398 aa18.07■□□□□ 0.48
TRIM28-202ENST00000341753 PLSCR4Q9NRQ2 329 aa18.07■□□□□ 0.48
TRIM28-202ENST00000341753 PTPRZ1P23471 2315 aaPredicted RBP18.06■□□□□ 0.48
TRIM28-202ENST00000341753 PLXNB1O43157 2135 aa18.06■□□□□ 0.48
TRIM28-202ENST00000341753 DLL1O00548 723 aa18.06■□□□□ 0.48
TRIM28-202ENST00000341753 OR2J3O76001 311 aa18.06■□□□□ 0.48
TRIM28-202ENST00000341753 SLC25A5P05141 298 aaKnown RBP18.06■□□□□ 0.48
TRIM28-202ENST00000341753 HIST1H1EP10412 219 aaKnown RBP18.06■□□□□ 0.48
TRIM28-202ENST00000341753 ZNF138P52744 262 aa18.06■□□□□ 0.48
TRIM28-202ENST00000341753 PGLYRP4Q96LB8 373 aa18.06■□□□□ 0.48
TRIM28-202ENST00000341753 IGHV2-70DA0A0C4DH43 119 aa18.06■□□□□ 0.48
TRIM28-202ENST00000341753 C1orf162Q8NEQ5 155 aaPredicted RBP18.06■□□□□ 0.48
TRIM28-202ENST00000341753 C7orf69Q9H7B7 122 aa18.06■□□□□ 0.48
TRIM28-202ENST00000341753 MOSP00540 346 aa18.05■□□□□ 0.48
TRIM28-202ENST00000341753 ORM2P19652 201 aa18.05■□□□□ 0.48
TRIM28-202ENST00000341753 RUSC1-AS1Q66K80 236 aa18.05■□□□□ 0.48
TRIM28-202ENST00000341753 LINC00305Q7Z4B0 112 aa18.05■□□□□ 0.48
TRIM28-202ENST00000341753 ZNF714Q96N38 554 aa18.05■□□□□ 0.48
TRIM28-202ENST00000341753 KALRNO60229 2985 aa18.05■□□□□ 0.48
TRIM28-202ENST00000341753 IGHV1-24A0A0C4DH33 117 aa18.05■□□□□ 0.48
TRIM28-202ENST00000341753 PRB4P10163 310 aaPredicted RBP18.05■□□□□ 0.48
TRIM28-202ENST00000341753 CFHR2P36980 270 aa18.05■□□□□ 0.48
TRIM28-202ENST00000341753 A0A1B0GXF2 115 aa18.04■□□□□ 0.48
TRIM28-202ENST00000341753 NUDT3O95989 172 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms