RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 OR2T8A6NH00 312 aa16.63■□□□□ 0.25
TPM1-204ENST00000334895 JTBO76095 146 aa16.63■□□□□ 0.25
TPM1-204ENST00000334895 IFNA5P01569 189 aa16.63■□□□□ 0.25
TPM1-204ENST00000334895 TRBV12-3P01733 135 aa16.63■□□□□ 0.25
TPM1-204ENST00000334895 GPR183P32249 361 aa16.63■□□□□ 0.25
TPM1-204ENST00000334895 NPBWR1P48145 328 aa16.63■□□□□ 0.25
TPM1-204ENST00000334895 RUNX1Q01196 453 aa16.63■□□□□ 0.25
TPM1-204ENST00000334895 TEPPQ6URK8 271 aa16.63■□□□□ 0.25
TPM1-204ENST00000334895 CLEC19AQ6UXS0 136 aa16.63■□□□□ 0.25
TPM1-204ENST00000334895 C18orf65Q6ZTR6 163 aa16.63■□□□□ 0.25
TPM1-204ENST00000334895 UBE2E2Q96LR5 201 aa16.63■□□□□ 0.25
TPM1-204ENST00000334895 OR5B12Q96R08 314 aa16.63■□□□□ 0.25
TPM1-204ENST00000334895 TXN2Q99757 166 aa16.63■□□□□ 0.25
TPM1-204ENST00000334895 BORCS7-ASMTA0A0B4J1R7 106 aa16.62■□□□□ 0.25
TPM1-204ENST00000334895 IGKV1-17P01599 117 aa16.62■□□□□ 0.25
TPM1-204ENST00000334895 CLEC3BP05452 202 aa16.62■□□□□ 0.25
TPM1-204ENST00000334895 OR10J1P30954 320 aa16.62■□□□□ 0.25
TPM1-204ENST00000334895 HSD17B11Q8NBQ5 300 aa16.62■□□□□ 0.25
TPM1-204ENST00000334895 ZNF414Q96IQ9 312 aa16.62■□□□□ 0.25
TPM1-204ENST00000334895 CHRDL1Q9BU40 450 aa16.62■□□□□ 0.25
TPM1-204ENST00000334895 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.61■□□□□ 0.25
TPM1-204ENST00000334895 GNG7O60262 68 aa16.61■□□□□ 0.25
TPM1-204ENST00000334895 CTSGP08311 255 aa16.61■□□□□ 0.25
TPM1-204ENST00000334895 ADMP35318 185 aa16.61■□□□□ 0.25
TPM1-204ENST00000334895 SLC51BQ86UW2 128 aa16.61■□□□□ 0.25
TPM1-204ENST00000334895 STOML3Q8TAV4 291 aa16.61■□□□□ 0.25
TPM1-204ENST00000334895 WFDC12Q8WWY7 111 aa16.61■□□□□ 0.25
TPM1-204ENST00000334895 RSG1Q9BU20 258 aa16.61■□□□□ 0.25
TPM1-204ENST00000334895 NPCDR1Q9BY65 106 aa16.61■□□□□ 0.25
TPM1-204ENST00000334895 TENM1Q9UKZ4 2725 aa16.6■□□□□ 0.25
TPM1-204ENST00000334895 ZFP92A6NM28 416 aa16.6■□□□□ 0.25
TPM1-204ENST00000334895 C4BPBP20851 252 aa16.6■□□□□ 0.25
TPM1-204ENST00000334895 ZNF90Q03938 601 aa16.6■□□□□ 0.25
TPM1-204ENST00000334895 TIGITQ495A1 244 aa16.6■□□□□ 0.25
TPM1-204ENST00000334895 AWAT1Q58HT5 328 aa16.6■□□□□ 0.25
TPM1-204ENST00000334895 TMEM182Q6ZP80 229 aaPredicted RBP16.6■□□□□ 0.25
TPM1-204ENST00000334895 ATP6V0BQ99437 205 aa16.6■□□□□ 0.25
TPM1-204ENST00000334895 CITED2Q99967 270 aaPredicted RBP16.6■□□□□ 0.25
TPM1-204ENST00000334895 GINS3Q9BRX5 216 aa16.6■□□□□ 0.25
TPM1-204ENST00000334895 GGTLC1Q9BX51 225 aa16.6■□□□□ 0.25
TPM1-204ENST00000334895 PPP5D1E7EU14 171 aa16.59■□□□□ 0.25
TPM1-204ENST00000334895 AGPAT2O15120 278 aa16.59■□□□□ 0.25
TPM1-204ENST00000334895 ATP6V0CP27449 155 aa16.59■□□□□ 0.25
TPM1-204ENST00000334895 CDX1P47902 265 aaPredicted RBP16.59■□□□□ 0.25
TPM1-204ENST00000334895 SCGB1C1Q8TD33 95 aa16.59■□□□□ 0.25
TPM1-204ENST00000334895 ST8SIA2Q92186 375 aa16.59■□□□□ 0.25
TPM1-204ENST00000334895 TRGV9Q99603 122 aa16.59■□□□□ 0.25
TPM1-204ENST00000334895 SH3BGRL3Q9H299 93 aa16.59■□□□□ 0.25
TPM1-204ENST00000334895 TCRBV4S1A1TA0A5B7 111 aa16.59■□□□□ 0.25
TPM1-204ENST00000334895 ANKRD34BA5PLL1 514 aa16.59■□□□□ 0.25
TPM1-204ENST00000334895 TGOLN2O43493 480 aa16.59■□□□□ 0.25
TPM1-204ENST00000334895 MPDU1O75352 247 aa16.59■□□□□ 0.25
TPM1-204ENST00000334895 LGALS1P09382 135 aaKnown RBP16.59■□□□□ 0.25
TPM1-204ENST00000334895 CAMLGP49069 296 aa16.59■□□□□ 0.25
TPM1-204ENST00000334895 SLC45A2Q9UMX9 530 aa16.59■□□□□ 0.25
TPM1-204ENST00000334895 DNHD1Q96M86 4753 aa16.58■□□□□ 0.25
TPM1-204ENST00000334895 GATA2P23769 480 aaPredicted RBP16.58■□□□□ 0.24
TPM1-204ENST00000334895 KHDC1LQ5JSQ8 128 aa16.58■□□□□ 0.24
TPM1-204ENST00000334895 BAP18Q8IXM2 172 aa16.58■□□□□ 0.24
TPM1-204ENST00000334895 STAB1Q9NY15 2570 aa16.57■□□□□ 0.24
TPM1-204ENST00000334895 TRAV30A0A087WSZ9 112 aa16.57■□□□□ 0.24
TPM1-204ENST00000334895 I3L521 148 aa16.57■□□□□ 0.24
TPM1-204ENST00000334895 TPT1P13693 172 aaKnown RBP16.57■□□□□ 0.24
TPM1-204ENST00000334895 FAM209BQ5JX69 171 aa16.57■□□□□ 0.24
TPM1-204ENST00000334895 CYP2G1PQ6ZSU1 146 aa16.57■□□□□ 0.24
TPM1-204ENST00000334895 GAR1Q9NY12 217 aaKnown RBP16.57■□□□□ 0.24
TPM1-204ENST00000334895 BMPR1BO00238 502 aa16.56■□□□□ 0.24
TPM1-204ENST00000334895 CFDP00746 253 aaPredicted RBP16.56■□□□□ 0.24
TPM1-204ENST00000334895 ARL3P36405 182 aa16.56■□□□□ 0.24
TPM1-204ENST00000334895 MIC13Q5XKP0 118 aa16.56■□□□□ 0.24
TPM1-204ENST00000334895 C4orf3Q8WVX3 66 aa16.56■□□□□ 0.24
TPM1-204ENST00000334895 PEF1Q9UBV8 284 aaKnown RBP16.56■□□□□ 0.24
TPM1-204ENST00000334895 ADARB2-AS1A8MUL3 147 aa16.56■□□□□ 0.24
TPM1-204ENST00000334895 NUPL2O15504 423 aaKnown RBP16.56■□□□□ 0.24
TPM1-204ENST00000334895 LINC00869P0C866 280 aa16.56■□□□□ 0.24
TPM1-204ENST00000334895 PRR20EP86478 221 aa16.56■□□□□ 0.24
TPM1-204ENST00000334895 PRR20CP86479 221 aa16.56■□□□□ 0.24
TPM1-204ENST00000334895 PRR20DP86480 221 aa16.56■□□□□ 0.24
TPM1-204ENST00000334895 PRR20BP86481 221 aa16.56■□□□□ 0.24
TPM1-204ENST00000334895 PRR20AP86496 221 aa16.56■□□□□ 0.24
TPM1-204ENST00000334895 BPIFCQ8NFQ6 507 aa16.56■□□□□ 0.24
TPM1-204ENST00000334895 TSSC4Q9Y5U2 329 aaPredicted RBP16.56■□□□□ 0.24
TPM1-204ENST00000334895 IGHV3-35A0A0C4DH35 117 aa16.55■□□□□ 0.24
TPM1-204ENST00000334895 SPP1P10451 314 aa16.55■□□□□ 0.24
TPM1-204ENST00000334895 PSG1P11464 419 aa16.55■□□□□ 0.24
TPM1-204ENST00000334895 YPEL3P61236 119 aaPredicted RBP16.55■□□□□ 0.24
TPM1-204ENST00000334895 EIF5AP63241 154 aaKnown RBP16.55■□□□□ 0.24
TPM1-204ENST00000334895 RAB31Q13636 194 aa16.55■□□□□ 0.24
TPM1-204ENST00000334895 SPSB3Q6PJ21 355 aa16.55■□□□□ 0.24
TPM1-204ENST00000334895 STPG3Q8N7X2 389 aa16.55■□□□□ 0.24
TPM1-204ENST00000334895 KLHL30-AS1Q8NEE0 82 aa16.55■□□□□ 0.24
TPM1-204ENST00000334895 PSMG3Q9BT73 122 aaPredicted RBP16.55■□□□□ 0.24
TPM1-204ENST00000334895 SLC25A32Q9H2D1 315 aa16.55■□□□□ 0.24
TPM1-204ENST00000334895 PLA2G2EQ9NZK7 142 aa16.55■□□□□ 0.24
TPM1-204ENST00000334895 TIMM9Q9Y5J7 89 aa16.55■□□□□ 0.24
TPM1-204ENST00000334895 TOMM40O96008 361 aa16.54■□□□□ 0.24
TPM1-204ENST00000334895 RPL29P47914 159 aaKnown RBP16.54■□□□□ 0.24
TPM1-204ENST00000334895 DEFB136Q30KP8 78 aa16.54■□□□□ 0.24
TPM1-204ENST00000334895 GNPNAT1Q96EK6 184 aaPredicted RBP16.54■□□□□ 0.24
TPM1-204ENST00000334895 PXMP4Q9Y6I8 212 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms