RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 C10orf55Q5SWW7 151 aa12.4□□□□□ -0.42
BRCC3-201ENST00000330045 PATE2Q6UY27 113 aa12.4□□□□□ -0.42
BRCC3-201ENST00000330045 WFDC8Q8IUA0 241 aa12.4□□□□□ -0.42
BRCC3-201ENST00000330045 TMEM186Q96B77 213 aa12.4□□□□□ -0.42
BRCC3-201ENST00000330045 MIEN1Q9BRT3 115 aa12.4□□□□□ -0.42
BRCC3-201ENST00000330045 ZNF586Q9NXT0 402 aa12.4□□□□□ -0.42
BRCC3-201ENST00000330045 FBXL7Q9UJT9 491 aa12.4□□□□□ -0.42
BRCC3-201ENST00000330045 PPIAL4AQ9Y536 164 aa12.4□□□□□ -0.42
BRCC3-201ENST00000330045 TCRBV4S1A1TA0A5B7 111 aa12.4□□□□□ -0.42
BRCC3-201ENST00000330045 BMPR1BO00238 502 aa12.4□□□□□ -0.42
BRCC3-201ENST00000330045 CA1P00915 261 aaPredicted RBP12.4□□□□□ -0.42
BRCC3-201ENST00000330045 IGHV3-48P01763 117 aa12.4□□□□□ -0.42
BRCC3-201ENST00000330045 SRIP30626 198 aa12.4□□□□□ -0.42
BRCC3-201ENST00000330045 COMPP49747 757 aaPredicted RBP12.4□□□□□ -0.42
BRCC3-201ENST00000330045 SAP30LQ9HAJ7 183 aa12.4□□□□□ -0.42
BRCC3-201ENST00000330045 TBL2Q9Y4P3 447 aaKnown RBP12.4□□□□□ -0.42
BRCC3-201ENST00000330045 DPRXA6NFQ7 191 aa12.39□□□□□ -0.43
BRCC3-201ENST00000330045 C16orf97H3BN30 126 aa12.39□□□□□ -0.43
BRCC3-201ENST00000330045 BPIFB3P59826 476 aa12.39□□□□□ -0.43
BRCC3-201ENST00000330045 FAM71F2Q6NXP2 309 aa12.39□□□□□ -0.43
BRCC3-201ENST00000330045 FAM168AQ92567 244 aa12.39□□□□□ -0.43
BRCC3-201ENST00000330045 KCNS1Q96KK3 526 aa12.39□□□□□ -0.43
BRCC3-201ENST00000330045 RCHY1Q96PM5 261 aa12.39□□□□□ -0.43
BRCC3-201ENST00000330045 IGKV1D-37A0A075B6S9 117 aa12.39□□□□□ -0.43
BRCC3-201ENST00000330045 A0A1W2PS18 150 aa12.39□□□□□ -0.43
BRCC3-201ENST00000330045 TMEM178BH3BS89 294 aa12.39□□□□□ -0.43
BRCC3-201ENST00000330045 IGLV2-23P01705 113 aa12.39□□□□□ -0.43
BRCC3-201ENST00000330045 AMTP48728 403 aa12.39□□□□□ -0.43
BRCC3-201ENST00000330045 KRTDAPP60985 99 aa12.39□□□□□ -0.43
BRCC3-201ENST00000330045 ZNF329Q86UD4 541 aa12.39□□□□□ -0.43
BRCC3-201ENST00000330045 SSBP3Q9BWW4 388 aaPredicted RBP12.39□□□□□ -0.43
BRCC3-201ENST00000330045 NRN1Q9NPD7 142 aa12.39□□□□□ -0.43
BRCC3-201ENST00000330045 ZNF331Q9NQX6 463 aaPredicted RBP12.39□□□□□ -0.43
BRCC3-201ENST00000330045 WASHC3Q9Y3C0 194 aa12.39□□□□□ -0.43
BRCC3-201ENST00000330045 RNF114Q9Y508 228 aa12.39□□□□□ -0.43
BRCC3-201ENST00000330045 NDUFB3O43676 98 aa12.38□□□□□ -0.43
BRCC3-201ENST00000330045 APCSP02743 223 aa12.38□□□□□ -0.43
BRCC3-201ENST00000330045 LINC00311Q8N616 119 aa12.38□□□□□ -0.43
BRCC3-201ENST00000330045 CCL17Q92583 94 aa12.38□□□□□ -0.43
BRCC3-201ENST00000330045 M0QZK8 103 aa12.38□□□□□ -0.43
BRCC3-201ENST00000330045 PEX7O00628 323 aa12.38□□□□□ -0.43
BRCC3-201ENST00000330045 ASPHD1Q5U4P2 390 aa12.38□□□□□ -0.43
BRCC3-201ENST00000330045 LYPD2Q6UXB3 125 aa12.38□□□□□ -0.43
BRCC3-201ENST00000330045 FAM231DQ6ZW35 169 aa12.38□□□□□ -0.43
BRCC3-201ENST00000330045 THAP8Q8NA92 274 aa12.38□□□□□ -0.43
BRCC3-201ENST00000330045 ZNF596Q8TC21 504 aa12.38□□□□□ -0.43
BRCC3-201ENST00000330045 ST6GALNAC6Q969X2 333 aa12.38□□□□□ -0.43
BRCC3-201ENST00000330045 ROS1P08922 2347 aa12.38□□□□□ -0.43
BRCC3-201ENST00000330045 TRAV34A0A0B4J273 112 aa12.37□□□□□ -0.43
BRCC3-201ENST00000330045 A0A0G2JNJ9 132 aa12.37□□□□□ -0.43
BRCC3-201ENST00000330045 PMCHP20382 165 aa12.37□□□□□ -0.43
BRCC3-201ENST00000330045 BSPH1Q075Z2 132 aa12.37□□□□□ -0.43
BRCC3-201ENST00000330045 LRRC10Q5BKY1 277 aa12.37□□□□□ -0.43
BRCC3-201ENST00000330045 MRPL52Q86TS9 123 aaKnown RBP12.37□□□□□ -0.43
BRCC3-201ENST00000330045 C8orf31Q8N9H6 132 aa12.37□□□□□ -0.43
BRCC3-201ENST00000330045 FXYD5Q96DB9 178 aa12.37□□□□□ -0.43
BRCC3-201ENST00000330045 MRPL36Q9P0J6 103 aaKnown RBP12.37□□□□□ -0.43
BRCC3-201ENST00000330045 Q9UFV3 132 aa12.37□□□□□ -0.43
BRCC3-201ENST00000330045 DIRC3C9JPN6 131 aa12.37□□□□□ -0.43
BRCC3-201ENST00000330045 SLC25A17O43808 307 aa12.37□□□□□ -0.43
BRCC3-201ENST00000330045 FSTL3O95633 263 aa12.37□□□□□ -0.43
BRCC3-201ENST00000330045 VMA21Q3ZAQ7 101 aa12.37□□□□□ -0.43
BRCC3-201ENST00000330045 LINC00305Q7Z4B0 112 aa12.37□□□□□ -0.43
BRCC3-201ENST00000330045 MBD6Q96DN6 1003 aa12.37□□□□□ -0.43
BRCC3-201ENST00000330045 ARFGEF3Q5TH69 2177 aa12.37□□□□□ -0.43
BRCC3-201ENST00000330045 TPRP12270 2363 aaKnown RBP12.36□□□□□ -0.43
BRCC3-201ENST00000330045 ZNF324O75467 553 aaPredicted RBP12.36□□□□□ -0.43
BRCC3-201ENST00000330045 REG1AP05451 166 aa12.36□□□□□ -0.43
BRCC3-201ENST00000330045 RASL11AQ6T310 242 aa12.36□□□□□ -0.43
BRCC3-201ENST00000330045 Q8N976 141 aa12.36□□□□□ -0.43
BRCC3-201ENST00000330045 A0A1W2PPI3 338 aa12.36□□□□□ -0.43
BRCC3-201ENST00000330045 TNFRSF13BO14836 293 aaPredicted RBP12.36□□□□□ -0.43
BRCC3-201ENST00000330045 SLAQ13239 276 aa12.36□□□□□ -0.43
BRCC3-201ENST00000330045 GFRALQ6UXV0 394 aa12.36□□□□□ -0.43
BRCC3-201ENST00000330045 NUDT10Q8NFP7 164 aa12.36□□□□□ -0.43
BRCC3-201ENST00000330045 OR4B1Q8NGF8 309 aa12.36□□□□□ -0.43
BRCC3-201ENST00000330045 WIPF2Q8TF74 440 aaPredicted RBP12.36□□□□□ -0.43
BRCC3-201ENST00000330045 NUDT11Q96G61 164 aa12.36□□□□□ -0.43
BRCC3-201ENST00000330045 GRAMD2BQ96HH9 432 aa12.36□□□□□ -0.43
BRCC3-201ENST00000330045 TMEM68Q96MH6 324 aa12.36□□□□□ -0.43
BRCC3-201ENST00000330045 TPSG1Q9NRR2 321 aa12.36□□□□□ -0.43
BRCC3-201ENST00000330045 PLAUP00749 431 aa12.35□□□□□ -0.43
BRCC3-201ENST00000330045 MC5RP33032 325 aa12.35□□□□□ -0.43
BRCC3-201ENST00000330045 THBDP07204 575 aa12.35□□□□□ -0.43
BRCC3-201ENST00000330045 ZNF137PP52743 207 aa12.35□□□□□ -0.43
BRCC3-201ENST00000330045 MFAP2P55001 183 aa12.35□□□□□ -0.43
BRCC3-201ENST00000330045 ZNF124Q15973 351 aa12.35□□□□□ -0.43
BRCC3-201ENST00000330045 NUP35Q8NFH5 326 aa12.35□□□□□ -0.43
BRCC3-201ENST00000330045 RITA1Q96K30 269 aa12.35□□□□□ -0.43
BRCC3-201ENST00000330045 CTSZQ9UBR2 303 aa12.35□□□□□ -0.43
BRCC3-201ENST00000330045 PRRG2O14669 202 aa12.34□□□□□ -0.43
BRCC3-201ENST00000330045 ORM2P19652 201 aa12.34□□□□□ -0.43
BRCC3-201ENST00000330045 PRR27Q6MZM9 219 aa12.34□□□□□ -0.43
BRCC3-201ENST00000330045 TSKUQ8WUA8 353 aa12.34□□□□□ -0.43
BRCC3-201ENST00000330045 CHRDL1Q9BU40 450 aa12.34□□□□□ -0.43
BRCC3-201ENST00000330045 ENSAO43768 121 aaKnown RBP12.34□□□□□ -0.43
BRCC3-201ENST00000330045 G0S2P27469 103 aa12.34□□□□□ -0.43
BRCC3-201ENST00000330045 LOXP28300 417 aaPredicted RBP12.34□□□□□ -0.43
BRCC3-201ENST00000330045 MYCNOSP40205 109 aa12.34□□□□□ -0.43
BRCC3-201ENST00000330045 DLX6P56179 175 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms