RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 ORM2P19652 201 aa6.04□□□□□ -1.44
IFT88-201ENST00000319980 C10orf113Q5VZT2 155 aa6.04□□□□□ -1.44
IFT88-201ENST00000319980 OCC1Q8TAD7 63 aa6.04□□□□□ -1.44
IFT88-201ENST00000319980 CFHR4Q92496 578 aa6.04□□□□□ -1.44
IFT88-201ENST00000319980 BPESC1Q9GZL8 116 aa6.04□□□□□ -1.44
IFT88-201ENST00000319980 ZNF355PQ9NSJ1 428 aa6.04□□□□□ -1.44
IFT88-201ENST00000319980 F11RQ9Y624 299 aaKnown RBP6.04□□□□□ -1.44
IFT88-201ENST00000319980 ODF3BA8MYP8 253 aa6.03□□□□□ -1.44
IFT88-201ENST00000319980 UBE2CO00762 179 aa6.03□□□□□ -1.44
IFT88-201ENST00000319980 NBR2O15453 112 aa6.03□□□□□ -1.44
IFT88-201ENST00000319980 CRYGCP07315 174 aa6.03□□□□□ -1.44
IFT88-201ENST00000319980 CRYBB3P26998 211 aa6.03□□□□□ -1.44
IFT88-201ENST00000319980 FAM3BP58499 235 aaPredicted RBP6.03□□□□□ -1.44
IFT88-201ENST00000319980 SELENOTP62341 195 aa6.03□□□□□ -1.44
IFT88-201ENST00000319980 FBLN7Q53RD9 439 aa6.03□□□□□ -1.44
IFT88-201ENST00000319980 PATE2Q6UY27 113 aa6.03□□□□□ -1.44
IFT88-201ENST00000319980 THAP8Q8NA92 274 aa6.03□□□□□ -1.44
IFT88-201ENST00000319980 OR5AU1Q8NGC0 362 aa6.03□□□□□ -1.44
IFT88-201ENST00000319980 C22orf15Q8WYQ4 148 aa6.03□□□□□ -1.44
IFT88-201ENST00000319980 FAM103A1Q9BTL3 118 aaKnown RBP6.03□□□□□ -1.44
IFT88-201ENST00000319980 GSX1Q9H4S2 264 aaPredicted RBP6.03□□□□□ -1.44
IFT88-201ENST00000319980 DMRT1Q9Y5R6 373 aa6.03□□□□□ -1.44
IFT88-201ENST00000319980 HIST1H2BKO60814 126 aa6.03□□□□□ -1.44
IFT88-201ENST00000319980 HIST1H2BJP06899 126 aa6.03□□□□□ -1.44
IFT88-201ENST00000319980 PYYP10082 97 aa6.03□□□□□ -1.44
IFT88-201ENST00000319980 HIST1H2BOP23527 126 aa6.03□□□□□ -1.44
IFT88-201ENST00000319980 HIST1H2BBP33778 126 aa6.03□□□□□ -1.44
IFT88-201ENST00000319980 NDUFA6P56556 154 aa6.03□□□□□ -1.44
IFT88-201ENST00000319980 HIST1H2BDP58876 126 aa6.03□□□□□ -1.44
IFT88-201ENST00000319980 HIST1H2BCP62807 126 aa6.03□□□□□ -1.44
IFT88-201ENST00000319980 UBE2L3P68036 154 aaKnown RBP6.03□□□□□ -1.44
IFT88-201ENST00000319980 HIST2H2BEQ16778 126 aa6.03□□□□□ -1.44
IFT88-201ENST00000319980 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.03□□□□□ -1.44
IFT88-201ENST00000319980 LINC00305Q7Z4B0 112 aa6.03□□□□□ -1.44
IFT88-201ENST00000319980 TMEM116Q8NCL8 245 aa6.03□□□□□ -1.44
IFT88-201ENST00000319980 OR1L4Q8NGR5 311 aa6.03□□□□□ -1.44
IFT88-201ENST00000319980 OR1B1Q8NGR6 318 aa6.03□□□□□ -1.44
IFT88-201ENST00000319980 HIST1H2BHQ93079 126 aa6.03□□□□□ -1.44
IFT88-201ENST00000319980 SFRP2Q96HF1 295 aa6.03□□□□□ -1.44
IFT88-201ENST00000319980 FAM167A-AS1Q96KT0 104 aa6.03□□□□□ -1.44
IFT88-201ENST00000319980 PFDN5Q99471 154 aa6.03□□□□□ -1.44
IFT88-201ENST00000319980 HIST1H2BNQ99877 126 aa6.03□□□□□ -1.44
IFT88-201ENST00000319980 HIST1H2BMQ99879 126 aa6.03□□□□□ -1.44
IFT88-201ENST00000319980 SLC25A2Q9BXI2 301 aa6.03□□□□□ -1.44
IFT88-201ENST00000319980 MRPL32Q9BYC8 188 aaKnown RBP6.03□□□□□ -1.44
IFT88-201ENST00000319980 WNT10AQ9GZT5 417 aa6.03□□□□□ -1.44
IFT88-201ENST00000319980 GGTLC3B5MD39 225 aa6.02□□□□□ -1.44
IFT88-201ENST00000319980 CORTO00230 105 aa6.02□□□□□ -1.44
IFT88-201ENST00000319980 PVRIGQ6DKI7 326 aa6.02□□□□□ -1.44
IFT88-201ENST00000319980 DYNAPQ8N1N2 210 aa6.02□□□□□ -1.44
IFT88-201ENST00000319980 RNF2Q99496 336 aa6.02□□□□□ -1.44
IFT88-201ENST00000319980 SPG11Q96JI7 2443 aa6.02□□□□□ -1.45
IFT88-201ENST00000319980 HELTA6NFD8 242 aa6.02□□□□□ -1.45
IFT88-201ENST00000319980 NCBP2LA6PVI3 153 aaKnown RBP6.02□□□□□ -1.45
IFT88-201ENST00000319980 PPP5D1E7EU14 171 aa6.02□□□□□ -1.45
IFT88-201ENST00000319980 FXYD3Q14802 87 aa6.02□□□□□ -1.45
IFT88-201ENST00000319980 FRZBQ92765 325 aa6.02□□□□□ -1.45
IFT88-201ENST00000319980 C12orf57Q99622 126 aa6.02□□□□□ -1.45
IFT88-201ENST00000319980 MDFIC2A0A1B0GVS7 189 aa6.02□□□□□ -1.45
IFT88-201ENST00000319980 PRB1P04280 392 aa6.02□□□□□ -1.45
IFT88-201ENST00000319980 TRGC1P0CF51 173 aa6.02□□□□□ -1.45
IFT88-201ENST00000319980 HOXB4P17483 251 aaPredicted RBP6.02□□□□□ -1.45
IFT88-201ENST00000319980 DMRTA1Q5VZB9 504 aa6.02□□□□□ -1.45
IFT88-201ENST00000319980 OR2T10Q8NGZ9 312 aa6.02□□□□□ -1.45
IFT88-201ENST00000319980 C11orf52Q96A22 123 aa6.02□□□□□ -1.45
IFT88-201ENST00000319980 PAXXQ9BUH6 204 aa6.02□□□□□ -1.45
IFT88-201ENST00000319980 LPAR2Q9HBW0 351 aa6.02□□□□□ -1.45
IFT88-201ENST00000319980 ARL2-SNX15V9GYD0 113 aa6.02□□□□□ -1.45
IFT88-201ENST00000319980 UBR5O95071 2799 aaPredicted RBP6.02□□□□□ -1.45
IFT88-201ENST00000319980 ELOA3CA0A087WX78 387 aaPredicted RBP6.01□□□□□ -1.45
IFT88-201ENST00000319980 A0A0U1RQK1 487 aa6.01□□□□□ -1.45
IFT88-201ENST00000319980 A0A1W2PRE2 83 aa6.01□□□□□ -1.45
IFT88-201ENST00000319980 ZNF98A6NK75 572 aa6.01□□□□□ -1.45
IFT88-201ENST00000319980 PCP4L1A6NKN8 68 aa6.01□□□□□ -1.45
IFT88-201ENST00000319980 K7EN84 100 aa6.01□□□□□ -1.45
IFT88-201ENST00000319980 TOX4O94842 621 aa6.01□□□□□ -1.45
IFT88-201ENST00000319980 CD99P14209 185 aa6.01□□□□□ -1.45
IFT88-201ENST00000319980 CCDC144NLQ6NUI1 221 aa6.01□□□□□ -1.45
IFT88-201ENST00000319980 KCNIP4Q6PIL6 250 aa6.01□□□□□ -1.45
IFT88-201ENST00000319980 NPBQ8NG41 125 aa6.01□□□□□ -1.45
IFT88-201ENST00000319980 TRGV9Q99603 122 aa6.01□□□□□ -1.45
IFT88-201ENST00000319980 PYGO2Q9BRQ0 406 aa6.01□□□□□ -1.45
IFT88-201ENST00000319980 OR51M1Q9H341 326 aa6.01□□□□□ -1.45
IFT88-201ENST00000319980 ZFYVE26Q68DK2 2539 aa6.01□□□□□ -1.45
IFT88-201ENST00000319980 BAHCC1Q9P281 2608 aa6.01□□□□□ -1.45
IFT88-201ENST00000319980 NDUFA3O95167 84 aa6.01□□□□□ -1.45
IFT88-201ENST00000319980 GOSR1O95249 250 aa6.01□□□□□ -1.45
IFT88-201ENST00000319980 SRP14P37108 136 aaKnown RBP6.01□□□□□ -1.45
IFT88-201ENST00000319980 GNG4P50150 75 aa6.01□□□□□ -1.45
IFT88-201ENST00000319980 LMO4P61968 165 aa6.01□□□□□ -1.45
IFT88-201ENST00000319980 PAX2Q02962 417 aa6.01□□□□□ -1.45
IFT88-201ENST00000319980 C5orf64Q2M2E5 130 aa6.01□□□□□ -1.45
IFT88-201ENST00000319980 KLF17Q5JT82 389 aaPredicted RBP6.01□□□□□ -1.45
IFT88-201ENST00000319980 TEX38Q6PEX7 206 aa6.01□□□□□ -1.45
IFT88-201ENST00000319980 KIR3DL3Q8N743 410 aa6.01□□□□□ -1.45
IFT88-201ENST00000319980 SGMS2Q8NHU3 365 aa6.01□□□□□ -1.45
IFT88-201ENST00000319980 SIRPDQ9H106 197 aa6.01□□□□□ -1.45
IFT88-201ENST00000319980 SRD5A3Q9H8P0 318 aa6.01□□□□□ -1.45
IFT88-201ENST00000319980 FLNCQ14315 2725 aa6.01□□□□□ -1.45
IFT88-201ENST00000319980 IGHV2-70DA0A0C4DH43 119 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms