RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 MRPL27Q9P0M9 148 aaKnown RBP13.95□□□□□ -0.18
SCAMP4-201ENST00000316097 LOC105371242A0A075B767 164 aa13.94□□□□□ -0.18
SCAMP4-201ENST00000316097 SHISA9B4DS77 424 aa13.94□□□□□ -0.18
SCAMP4-201ENST00000316097 M0R2Z0 102 aa13.94□□□□□ -0.18
SCAMP4-201ENST00000316097 LHBP01229 141 aa13.94□□□□□ -0.18
SCAMP4-201ENST00000316097 PPOXP50336 477 aa13.94□□□□□ -0.18
SCAMP4-201ENST00000316097 MZT1Q08AG7 82 aa13.94□□□□□ -0.18
SCAMP4-201ENST00000316097 EBLN2Q6P2I7 272 aa13.94□□□□□ -0.18
SCAMP4-201ENST00000316097 IGF2BP2-AS1Q96M15 143 aa13.94□□□□□ -0.18
SCAMP4-201ENST00000316097 IFI27L2Q9H2X8 130 aa13.94□□□□□ -0.18
SCAMP4-201ENST00000316097 JPT1Q9UK76 154 aa13.94□□□□□ -0.18
SCAMP4-201ENST00000316097 ACACBO00763 2458 aa13.94□□□□□ -0.18
SCAMP4-201ENST00000316097 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.94□□□□□ -0.18
SCAMP4-201ENST00000316097 FAM181BA6NEQ2 426 aa13.94□□□□□ -0.18
SCAMP4-201ENST00000316097 E7EQL1 145 aa13.94□□□□□ -0.18
SCAMP4-201ENST00000316097 HSPE1P61604 102 aaKnown RBP13.94□□□□□ -0.18
SCAMP4-201ENST00000316097 OR4A47Q6IF82 309 aa13.94□□□□□ -0.18
SCAMP4-201ENST00000316097 TRAT1Q6PIZ9 186 aa13.94□□□□□ -0.18
SCAMP4-201ENST00000316097 C1orf229Q6ZS94 237 aaPredicted RBP13.94□□□□□ -0.18
SCAMP4-201ENST00000316097 FAM90A1Q86YD7 464 aa13.94□□□□□ -0.18
SCAMP4-201ENST00000316097 CORO2AQ92828 525 aa13.94□□□□□ -0.18
SCAMP4-201ENST00000316097 ABCA4P78363 2273 aa13.93□□□□□ -0.18
SCAMP4-201ENST00000316097 TRAV9-2A0A087WT02 112 aa13.93□□□□□ -0.18
SCAMP4-201ENST00000316097 IGLL1P15814 213 aa13.93□□□□□ -0.18
SCAMP4-201ENST00000316097 OR5B3Q8NH48 314 aa13.93□□□□□ -0.18
SCAMP4-201ENST00000316097 OR4S2Q8NH73 311 aa13.93□□□□□ -0.18
SCAMP4-201ENST00000316097 LEAP2Q969E1 77 aa13.93□□□□□ -0.18
SCAMP4-201ENST00000316097 MFAP2P55001 183 aa13.93□□□□□ -0.18
SCAMP4-201ENST00000316097 FBLN7Q53RD9 439 aa13.93□□□□□ -0.18
SCAMP4-201ENST00000316097 SAPCD1Q5SSQ6 148 aa13.93□□□□□ -0.18
SCAMP4-201ENST00000316097 UTF1Q5T230 341 aa13.93□□□□□ -0.18
SCAMP4-201ENST00000316097 LINC00479Q96M42 142 aa13.93□□□□□ -0.18
SCAMP4-201ENST00000316097 IGKV1OR2-108A0A075B7D4 117 aa13.92□□□□□ -0.18
SCAMP4-201ENST00000316097 COTL1Q14019 142 aa13.92□□□□□ -0.18
SCAMP4-201ENST00000316097 RNASEKQ6P5S7 137 aaKnown RBP13.92□□□□□ -0.18
SCAMP4-201ENST00000316097 IGLC7A0M8Q6 106 aa13.92□□□□□ -0.18
SCAMP4-201ENST00000316097 K7EP13 123 aa13.92□□□□□ -0.18
SCAMP4-201ENST00000316097 ITGB1BP1O14713 200 aa13.92□□□□□ -0.18
SCAMP4-201ENST00000316097 TNFSF4P23510 183 aa13.92□□□□□ -0.18
SCAMP4-201ENST00000316097 OR4F17Q8NGA8 305 aa13.92□□□□□ -0.18
SCAMP4-201ENST00000316097 OR4C5Q8NGB2 326 aa13.92□□□□□ -0.18
SCAMP4-201ENST00000316097 ZNF355PQ9NSJ1 428 aa13.92□□□□□ -0.18
SCAMP4-201ENST00000316097 TMEM14BQ9NUH8 114 aa13.92□□□□□ -0.18
SCAMP4-201ENST00000316097 RNF7Q9UBF6 113 aa13.92□□□□□ -0.18
SCAMP4-201ENST00000316097 FOXA2Q9Y261 457 aaPredicted RBP13.92□□□□□ -0.18
SCAMP4-201ENST00000316097 SPTBN1Q01082 2364 aaKnown RBP13.91□□□□□ -0.18
SCAMP4-201ENST00000316097 IGHV1-69-2A0A0G2JMI3 117 aa13.91□□□□□ -0.18
SCAMP4-201ENST00000316097 C17orf100A8MU93 164 aa13.91□□□□□ -0.18
SCAMP4-201ENST00000316097 GPR6P46095 362 aaPredicted RBP13.91□□□□□ -0.18
SCAMP4-201ENST00000316097 UQCRFS1P47985 274 aa13.91□□□□□ -0.18
SCAMP4-201ENST00000316097 RPL8P62917 257 aaKnown RBP13.91□□□□□ -0.18
SCAMP4-201ENST00000316097 GDF5OSQ5U4N7 250 aa13.91□□□□□ -0.18
SCAMP4-201ENST00000316097 DDB2Q92466 427 aa13.91□□□□□ -0.18
SCAMP4-201ENST00000316097 CCL13Q99616 98 aa13.91□□□□□ -0.18
SCAMP4-201ENST00000316097 TP73-AS1Q9UF72 201 aa13.91□□□□□ -0.18
SCAMP4-201ENST00000316097 DSCAMO60469 2012 aa13.91□□□□□ -0.18
SCAMP4-201ENST00000316097 ANKHD1Q8IWZ3 2542 aaKnown RBP13.91□□□□□ -0.18
SCAMP4-201ENST00000316097 CFHR2P36980 270 aa13.91□□□□□ -0.18
SCAMP4-201ENST00000316097 KIR2DS2P43631 304 aa13.91□□□□□ -0.18
SCAMP4-201ENST00000316097 TAS2R45P59539 299 aa13.91□□□□□ -0.18
SCAMP4-201ENST00000316097 UBE2G1P62253 170 aa13.91□□□□□ -0.18
SCAMP4-201ENST00000316097 RNF151Q2KHN1 245 aa13.91□□□□□ -0.18
SCAMP4-201ENST00000316097 ERASQ7Z444 233 aa13.91□□□□□ -0.18
SCAMP4-201ENST00000316097 GATA4P43694 442 aa13.9□□□□□ -0.18
SCAMP4-201ENST00000316097 CDKN1BP46527 198 aa13.9□□□□□ -0.18
SCAMP4-201ENST00000316097 LOXL3P58215 753 aa13.9□□□□□ -0.18
SCAMP4-201ENST00000316097 PRR31Q5SQ13 230 aa13.9□□□□□ -0.18
SCAMP4-201ENST00000316097 FAM216BQ8N7L0 139 aa13.9□□□□□ -0.18
SCAMP4-201ENST00000316097 OR8B3Q8NGG8 313 aa13.9□□□□□ -0.18
SCAMP4-201ENST00000316097 CCL17Q92583 94 aa13.9□□□□□ -0.18
SCAMP4-201ENST00000316097 OR8B2Q96RD0 313 aa13.9□□□□□ -0.18
SCAMP4-201ENST00000316097 SSBP4Q9BWG4 385 aaPredicted RBP13.9□□□□□ -0.18
SCAMP4-201ENST00000316097 COMMD5Q9GZQ3 224 aa13.9□□□□□ -0.18
SCAMP4-201ENST00000316097 IDI2-AS1Q9NZ38 188 aa13.9□□□□□ -0.18
SCAMP4-201ENST00000316097 CFAP46Q8IYW2 2715 aa13.9□□□□□ -0.18
SCAMP4-201ENST00000316097 IGHV2-70DA0A0C4DH43 119 aa13.9□□□□□ -0.18
SCAMP4-201ENST00000316097 A0A1W2PRE2 83 aa13.9□□□□□ -0.18
SCAMP4-201ENST00000316097 H0YJW9 148 aa13.9□□□□□ -0.18
SCAMP4-201ENST00000316097 MUC15Q8N387 334 aa13.9□□□□□ -0.18
SCAMP4-201ENST00000316097 PNKDQ8N490 385 aa13.9□□□□□ -0.18
SCAMP4-201ENST00000316097 KIR3DL3Q8N743 410 aa13.9□□□□□ -0.18
SCAMP4-201ENST00000316097 ST6GALNAC6Q969X2 333 aa13.9□□□□□ -0.18
SCAMP4-201ENST00000316097 TNFRSF19Q9NS68 423 aa13.9□□□□□ -0.18
SCAMP4-201ENST00000316097 OR51B2Q9Y5P1 312 aa13.9□□□□□ -0.18
SCAMP4-201ENST00000316097 SPATA12Q7Z6I5 190 aa13.89□□□□□ -0.19
SCAMP4-201ENST00000316097 NUP35Q8NFH5 326 aa13.89□□□□□ -0.19
SCAMP4-201ENST00000316097 SAP30LQ9HAJ7 183 aa13.89□□□□□ -0.19
SCAMP4-201ENST00000316097 NGBQ9NPG2 151 aa13.89□□□□□ -0.19
SCAMP4-201ENST00000316097 DYSFO75923 2080 aa13.89□□□□□ -0.19
SCAMP4-201ENST00000316097 HIVEP3Q5T1R4 2406 aa13.89□□□□□ -0.19
SCAMP4-201ENST00000316097 VAMP3Q15836 100 aa13.89□□□□□ -0.19
SCAMP4-201ENST00000316097 MLANAQ16655 118 aa13.89□□□□□ -0.19
SCAMP4-201ENST00000316097 OR2D3Q8NGH3 330 aa13.89□□□□□ -0.19
SCAMP4-201ENST00000316097 RNASE6Q93091 150 aaKnown RBP13.89□□□□□ -0.19
SCAMP4-201ENST00000316097 CLEC5AQ9NY25 188 aa13.89□□□□□ -0.19
SCAMP4-201ENST00000316097 TRAV5A0A0B4J249 113 aa13.88□□□□□ -0.19
SCAMP4-201ENST00000316097 C2orf70A6NJV1 201 aa13.88□□□□□ -0.19
SCAMP4-201ENST00000316097 C8orf88P0DMB2 117 aa13.88□□□□□ -0.19
SCAMP4-201ENST00000316097 CAMPP49913 170 aa13.88□□□□□ -0.19
SCAMP4-201ENST00000316097 PRR27Q6MZM9 219 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms