RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 CFHR5Q9BXR6 569 aa13.02□□□□□ -0.32
HCFC1-201ENST00000310441 FAM19A2Q8N3H0 131 aa13.02□□□□□ -0.32
HCFC1-201ENST00000310441 LEAP2Q969E1 77 aa13.02□□□□□ -0.33
HCFC1-201ENST00000310441 R3HDMLQ9H3Y0 253 aa13.02□□□□□ -0.33
HCFC1-201ENST00000310441 LAMTOR3Q9UHA4 124 aa13.02□□□□□ -0.33
HCFC1-201ENST00000310441 TRAV2A0A0B4J234 112 aa13.02□□□□□ -0.33
HCFC1-201ENST00000310441 PRR19A6NJB7 356 aa13.02□□□□□ -0.33
HCFC1-201ENST00000310441 SSBP2P81877 361 aaPredicted RBP13.02□□□□□ -0.33
HCFC1-201ENST00000310441 MESP2Q0VG99 397 aa13.02□□□□□ -0.33
HCFC1-201ENST00000310441 TNFRSF14Q92956 283 aa13.02□□□□□ -0.33
HCFC1-201ENST00000310441 ZNHIT1O43257 154 aa13.01□□□□□ -0.33
HCFC1-201ENST00000310441 DENND4CQ5VZ89 1909 aa13.01□□□□□ -0.33
HCFC1-201ENST00000310441 MRPS18CQ9Y3D5 142 aaKnown RBP13.01□□□□□ -0.33
HCFC1-201ENST00000310441 SIP14410 1827 aa13.01□□□□□ -0.33
HCFC1-201ENST00000310441 TSKUQ8WUA8 353 aa13.01□□□□□ -0.33
HCFC1-201ENST00000310441 C1QTNF5Q9BXJ0 243 aa13.01□□□□□ -0.33
HCFC1-201ENST00000310441 A0A1W2PRS3 328 aa13.01□□□□□ -0.33
HCFC1-201ENST00000310441 H3BTX0 84 aa13.01□□□□□ -0.33
HCFC1-201ENST00000310441 RPL32P62910 135 aaKnown RBP13.01□□□□□ -0.33
HCFC1-201ENST00000310441 SPAARA0A1B0GVQ0 90 aa13.01□□□□□ -0.33
HCFC1-201ENST00000310441 TFF3Q07654 80 aa13.01□□□□□ -0.33
HCFC1-201ENST00000310441 ZNRF1Q8ND25 227 aa13.01□□□□□ -0.33
HCFC1-201ENST00000310441 ADAMTS7Q9UKP4 1686 aa13.01□□□□□ -0.33
HCFC1-201ENST00000310441 TRAV8-1A0A0A6YYK1 113 aa13□□□□□ -0.33
HCFC1-201ENST00000310441 H3BMM0 161 aa13□□□□□ -0.33
HCFC1-201ENST00000310441 UBE2CO00762 179 aa13□□□□□ -0.33
HCFC1-201ENST00000310441 CLEC19AQ6UXS0 136 aa13□□□□□ -0.33
HCFC1-201ENST00000310441 TRAV14DV4A0A0A6YYC5 116 aa13□□□□□ -0.33
HCFC1-201ENST00000310441 NLRC5Q86WI3 1866 aa13□□□□□ -0.33
HCFC1-201ENST00000310441 SORL1Q92673 2214 aa13□□□□□ -0.33
HCFC1-201ENST00000310441 HIST1H4AP62805 103 aaKnown RBP13□□□□□ -0.33
HCFC1-201ENST00000310441 OR13A1Q8NGR1 328 aa13□□□□□ -0.33
HCFC1-201ENST00000310441 SRXN1Q9BYN0 137 aa13□□□□□ -0.33
HCFC1-201ENST00000310441 PRSS22Q9GZN4 317 aa13□□□□□ -0.33
HCFC1-201ENST00000310441 BSPH1Q075Z2 132 aa13□□□□□ -0.33
HCFC1-201ENST00000310441 SIGLEC15Q6ZMC9 328 aa13□□□□□ -0.33
HCFC1-201ENST00000310441 EPDR1Q9UM22 224 aa13□□□□□ -0.33
HCFC1-201ENST00000310441 SPG11Q96JI7 2443 aa13□□□□□ -0.33
HCFC1-201ENST00000310441 A0A1W2PQF6 199 aa13□□□□□ -0.33
HCFC1-201ENST00000310441 SLC22A18ASQ8N1D0 253 aa13□□□□□ -0.33
HCFC1-201ENST00000310441 ATXN7O15265 892 aaPredicted RBP13□□□□□ -0.33
HCFC1-201ENST00000310441 C1QL4Q86Z23 238 aa13□□□□□ -0.33
HCFC1-201ENST00000310441 MSGN1A6NI15 193 aa12.99□□□□□ -0.33
HCFC1-201ENST00000310441 IFI27L1Q96BM0 104 aa12.99□□□□□ -0.33
HCFC1-201ENST00000310441 LINC00158P58513 81 aa12.99□□□□□ -0.33
HCFC1-201ENST00000310441 TMEM52Q8NDY8 209 aa12.99□□□□□ -0.33
HCFC1-201ENST00000310441 EGR1P18146 543 aa12.99□□□□□ -0.33
HCFC1-201ENST00000310441 LURAP1LQ8IV03 231 aa12.99□□□□□ -0.33
HCFC1-201ENST00000310441 TGFAP01135 160 aa12.99□□□□□ -0.33
HCFC1-201ENST00000310441 IFITM3Q01628 133 aa12.99□□□□□ -0.33
HCFC1-201ENST00000310441 OR10W1Q8NGF6 305 aa12.99□□□□□ -0.33
HCFC1-201ENST00000310441 CTHRC1Q96CG8 243 aa12.99□□□□□ -0.33
HCFC1-201ENST00000310441 SNAI2O43623 268 aa12.99□□□□□ -0.33
HCFC1-201ENST00000310441 SRSF7Q16629 238 aaKnown RBP eCLIP12.99□□□□□ -0.33
HCFC1-201ENST00000310441 C8orf46Q8TAG6 207 aa12.99□□□□□ -0.33
HCFC1-201ENST00000310441 INAFM2P0DMQ5 153 aa12.99□□□□□ -0.33
HCFC1-201ENST00000310441 IL9P15248 144 aa12.99□□□□□ -0.33
HCFC1-201ENST00000310441 FBXL15Q9H469 300 aa12.99□□□□□ -0.33
HCFC1-201ENST00000310441 TNFRSF6BO95407 300 aa12.98□□□□□ -0.33
HCFC1-201ENST00000310441 IQCF6A8MYZ5 107 aa12.98□□□□□ -0.33
HCFC1-201ENST00000310441 IGHV3-48P01763 117 aa12.98□□□□□ -0.33
HCFC1-201ENST00000310441 CENPVL1A0A0U1RR11 272 aa12.98□□□□□ -0.33
HCFC1-201ENST00000310441 KLF4O43474 513 aa12.98□□□□□ -0.33
HCFC1-201ENST00000310441 ST6GALNAC6Q969X2 333 aa12.98□□□□□ -0.33
HCFC1-201ENST00000310441 RPL23P62829 140 aaKnown RBP12.98□□□□□ -0.33
HCFC1-201ENST00000310441 ZNF124Q15973 351 aa12.98□□□□□ -0.33
HCFC1-201ENST00000310441 LOC102723996A0A087X1L8 192 aa12.98□□□□□ -0.33
HCFC1-201ENST00000310441 RBMY1FQ15415 496 aaKnown RBP12.98□□□□□ -0.33
HCFC1-201ENST00000310441 C1QTNF4Q9BXJ3 329 aa12.98□□□□□ -0.33
HCFC1-201ENST00000310441 RNASE7Q9H1E1 156 aaKnown RBP12.98□□□□□ -0.33
HCFC1-201ENST00000310441 C12orf77C9JDV5 145 aa12.97□□□□□ -0.33
HCFC1-201ENST00000310441 LINC00271P0C7V0 271 aa12.97□□□□□ -0.33
HCFC1-201ENST00000310441 C1QTNF9P0C862 333 aa12.97□□□□□ -0.33
HCFC1-201ENST00000310441 TEX43Q6ZNM6 134 aa12.97□□□□□ -0.33
HCFC1-201ENST00000310441 TMEM155Q4W5P6 130 aa12.97□□□□□ -0.33
HCFC1-201ENST00000310441 CHCHD5Q9BSY4 110 aa12.97□□□□□ -0.33
HCFC1-201ENST00000310441 C2orf16Q68DN1 1984 aa12.97□□□□□ -0.33
HCFC1-201ENST00000310441 ADMP35318 185 aa12.97□□□□□ -0.33
HCFC1-201ENST00000310441 EDA2RQ9HAV5 297 aa12.97□□□□□ -0.33
HCFC1-201ENST00000310441 A0A087WX48 190 aa12.97□□□□□ -0.33
HCFC1-201ENST00000310441 LDLRAD4O15165 306 aa12.97□□□□□ -0.33
HCFC1-201ENST00000310441 PRR32B1ATL7 298 aa12.97□□□□□ -0.33
HCFC1-201ENST00000310441 ESDP10768 282 aa12.97□□□□□ -0.33
HCFC1-201ENST00000310441 RIPPLY3P57055 190 aa12.97□□□□□ -0.33
HCFC1-201ENST00000310441 C18orf12Q96KH6 178 aa12.97□□□□□ -0.33
HCFC1-201ENST00000310441 SLC25A39Q9BZJ4 359 aaPredicted RBP12.97□□□□□ -0.33
HCFC1-201ENST00000310441 NCOA6Q14686 2063 aaPredicted RBP12.97□□□□□ -0.33
HCFC1-201ENST00000310441 GATD1Q8NB37 220 aa12.97□□□□□ -0.33
HCFC1-201ENST00000310441 ZNF497Q6ZNH5 498 aa12.96□□□□□ -0.33
HCFC1-201ENST00000310441 FAM90A2PQ658T7 463 aa12.96□□□□□ -0.33
HCFC1-201ENST00000310441 RASL10AQ92737 203 aa12.96□□□□□ -0.33
HCFC1-201ENST00000310441 PAX4O43316 350 aa12.96□□□□□ -0.33
HCFC1-201ENST00000310441 HIST1H2BKO60814 126 aa12.96□□□□□ -0.33
HCFC1-201ENST00000310441 HIST1H2BJP06899 126 aa12.96□□□□□ -0.33
HCFC1-201ENST00000310441 HIST1H2BOP23527 126 aa12.96□□□□□ -0.33
HCFC1-201ENST00000310441 HIST1H2BBP33778 126 aa12.96□□□□□ -0.33
HCFC1-201ENST00000310441 HIST1H2BDP58876 126 aa12.96□□□□□ -0.33
HCFC1-201ENST00000310441 HIST1H2BCP62807 126 aa12.96□□□□□ -0.33
HCFC1-201ENST00000310441 HIST2H2BEQ16778 126 aa12.96□□□□□ -0.33
HCFC1-201ENST00000310441 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms