RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 SSBP1Q04837 148 aaKnown RBP14.24□□□□□ -0.13
CXCL3-201ENST00000296026 C2orf83Q53S99 150 aa14.24□□□□□ -0.13
CXCL3-201ENST00000296026 ACTL10Q5JWF8 245 aa14.24□□□□□ -0.13
CXCL3-201ENST00000296026 GPR107Q5VW38 600 aa14.24□□□□□ -0.13
CXCL3-201ENST00000296026 PRSS54Q6PEW0 395 aa14.24□□□□□ -0.13
CXCL3-201ENST00000296026 SELENOHQ8IZQ5 122 aaKnown RBP14.24□□□□□ -0.13
CXCL3-201ENST00000296026 OR1S2Q8NGQ3 325 aa14.24□□□□□ -0.13
CXCL3-201ENST00000296026 Q8WTZ3 238 aa14.24□□□□□ -0.13
CXCL3-201ENST00000296026 NAA60Q9H7X0 242 aa14.24□□□□□ -0.13
CXCL3-201ENST00000296026 CACNG5Q9UF02 275 aa14.24□□□□□ -0.13
CXCL3-201ENST00000296026 U3KQE9 123 aa14.24□□□□□ -0.13
CXCL3-201ENST00000296026 AGRNO00468 2067 aa14.24□□□□□ -0.13
CXCL3-201ENST00000296026 HELTA6NFD8 242 aa14.23□□□□□ -0.13
CXCL3-201ENST00000296026 RGS5O15539 181 aa14.23□□□□□ -0.13
CXCL3-201ENST00000296026 HNRNPCP07910 306 aaKnown RBP eCLIP14.23□□□□□ -0.13
CXCL3-201ENST00000296026 SMIM18P0DKX4 95 aa14.23□□□□□ -0.13
CXCL3-201ENST00000296026 SLC25A4P12235 298 aa14.23□□□□□ -0.13
CXCL3-201ENST00000296026 MIFP14174 115 aa14.23□□□□□ -0.13
CXCL3-201ENST00000296026 DHRS2Q13268 280 aa14.23□□□□□ -0.13
CXCL3-201ENST00000296026 MEF2DQ14814 521 aa14.23□□□□□ -0.13
CXCL3-201ENST00000296026 SLC24A4Q8NFF2 622 aa14.23□□□□□ -0.13
CXCL3-201ENST00000296026 RNASEH2CQ8TDP1 164 aaKnown RBP14.23□□□□□ -0.13
CXCL3-201ENST00000296026 GPR146Q96CH1 333 aa14.23□□□□□ -0.13
CXCL3-201ENST00000296026 APLNQ9ULZ1 77 aa14.23□□□□□ -0.13
CXCL3-201ENST00000296026 CEBPZOSA8MTT3 80 aa14.22□□□□□ -0.13
CXCL3-201ENST00000296026 ZNF705EA8MWA4 302 aaPredicted RBP14.22□□□□□ -0.13
CXCL3-201ENST00000296026 DISC1C4P0D8 188 aa14.22□□□□□ -0.13
CXCL3-201ENST00000296026 OR10J1P30954 320 aa14.22□□□□□ -0.13
CXCL3-201ENST00000296026 YPEL3P61236 119 aaPredicted RBP14.22□□□□□ -0.13
CXCL3-201ENST00000296026 MRPS10P82664 201 aaKnown RBP14.22□□□□□ -0.13
CXCL3-201ENST00000296026 DHODHQ02127 395 aa14.22□□□□□ -0.13
CXCL3-201ENST00000296026 SURF2Q15527 256 aaPredicted RBP14.22□□□□□ -0.13
CXCL3-201ENST00000296026 TMEM268Q5VZI3 342 aa14.22□□□□□ -0.13
CXCL3-201ENST00000296026 C16orf54Q6UWD8 224 aa14.22□□□□□ -0.13
CXCL3-201ENST00000296026 GLMPQ8WWB7 406 aa14.22□□□□□ -0.13
CXCL3-201ENST00000296026 CLEC5AQ9NY25 188 aa14.22□□□□□ -0.13
CXCL3-201ENST00000296026 X6R8D5 127 aa14.22□□□□□ -0.13
CXCL3-201ENST00000296026 CTDSP2O14595 271 aa14.21□□□□□ -0.13
CXCL3-201ENST00000296026 HLA-DMBP28068 263 aa14.21□□□□□ -0.13
CXCL3-201ENST00000296026 AP2S1P53680 142 aaPredicted RBP14.21□□□□□ -0.13
CXCL3-201ENST00000296026 PSMG4Q5JS54 123 aa14.21□□□□□ -0.13
CXCL3-201ENST00000296026 RAB40CQ96S21 281 aa14.21□□□□□ -0.13
CXCL3-201ENST00000296026 GPR132Q9UNW8 380 aa14.21□□□□□ -0.13
CXCL3-201ENST00000296026 KMT2AQ03164 3969 aa14.21□□□□□ -0.13
CXCL3-201ENST00000296026 FRAS1Q86XX4 4008 aa14.2□□□□□ -0.14
CXCL3-201ENST00000296026 CRYM-AS1A6NIL9 109 aa14.2□□□□□ -0.14
CXCL3-201ENST00000296026 NXPH3O95157 252 aa14.2□□□□□ -0.14
CXCL3-201ENST00000296026 USF2Q15853 346 aaPredicted RBP14.2□□□□□ -0.14
CXCL3-201ENST00000296026 ETFRF1Q6IPR1 90 aa14.2□□□□□ -0.14
CXCL3-201ENST00000296026 CSNK1G2-AS1Q8NCQ2 148 aa14.2□□□□□ -0.14
CXCL3-201ENST00000296026 OR4C16Q8NGL9 310 aa14.2□□□□□ -0.14
CXCL3-201ENST00000296026 TMEM170AQ8WVE7 144 aa14.2□□□□□ -0.14
CXCL3-201ENST00000296026 SMIM4Q8WVI0 70 aa14.2□□□□□ -0.14
CXCL3-201ENST00000296026 TBC1D24Q9ULP9 559 aa14.2□□□□□ -0.14
CXCL3-201ENST00000296026 ELOA3CA0A087WX78 387 aaPredicted RBP14.19□□□□□ -0.14
CXCL3-201ENST00000296026 IL4P05112 153 aa14.19□□□□□ -0.14
CXCL3-201ENST00000296026 AKAIN1P0CW23 69 aa14.19□□□□□ -0.14
CXCL3-201ENST00000296026 Q6ZTC4 211 aa14.19□□□□□ -0.14
CXCL3-201ENST00000296026 CENPSQ8N2Z9 138 aa14.19□□□□□ -0.14
CXCL3-201ENST00000296026 NPIPB3Q92617 1050 aa14.19□□□□□ -0.14
CXCL3-201ENST00000296026 TMEM56-RWDD3S4R434 201 aa14.19□□□□□ -0.14
CXCL3-201ENST00000296026 TRAV10A0A0B4J240 114 aa14.18□□□□□ -0.14
CXCL3-201ENST00000296026 NPY1RP25929 384 aa14.18□□□□□ -0.14
CXCL3-201ENST00000296026 ACY3Q96HD9 319 aa14.18□□□□□ -0.14
CXCL3-201ENST00000296026 FAM90A26D6RGX4 464 aa14.17□□□□□ -0.14
CXCL3-201ENST00000296026 TOMM40O96008 361 aa14.17□□□□□ -0.14
CXCL3-201ENST00000296026 RD3LP0DJH9 198 aa14.17□□□□□ -0.14
CXCL3-201ENST00000296026 SULT1A3P0DMM9 295 aa14.17□□□□□ -0.14
CXCL3-201ENST00000296026 SULT1A4P0DMN0 295 aa14.17□□□□□ -0.14
CXCL3-201ENST00000296026 SNRPD3P62318 126 aaKnown RBP14.17□□□□□ -0.14
CXCL3-201ENST00000296026 SPCS2Q15005 226 aa14.17□□□□□ -0.14
CXCL3-201ENST00000296026 NOXA1Q86UR1 476 aa14.17□□□□□ -0.14
CXCL3-201ENST00000296026 OR51S1Q8NGJ8 323 aa14.17□□□□□ -0.14
CXCL3-201ENST00000296026 PRRT1Q99946 306 aa14.17□□□□□ -0.14
CXCL3-201ENST00000296026 NRN1Q9NPD7 142 aa14.17□□□□□ -0.14
CXCL3-201ENST00000296026 BUB3O43684 328 aa14.16□□□□□ -0.14
CXCL3-201ENST00000296026 IFNA10P01566 189 aa14.16□□□□□ -0.14
CXCL3-201ENST00000296026 IL18Q14116 193 aa14.16□□□□□ -0.14
CXCL3-201ENST00000296026 NMSQ5H8A3 153 aa14.16□□□□□ -0.14
CXCL3-201ENST00000296026 SIGLEC15Q6ZMC9 328 aa14.16□□□□□ -0.14
CXCL3-201ENST00000296026 GPR141Q7Z602 305 aa14.16□□□□□ -0.14
CXCL3-201ENST00000296026 IL22RA2Q969J5 263 aa14.16□□□□□ -0.14
CXCL3-201ENST00000296026 DIRAS2Q96HU8 199 aa14.16□□□□□ -0.14
CXCL3-201ENST00000296026 PRR13Q9NZ81 148 aa14.16□□□□□ -0.14
CXCL3-201ENST00000296026 CACFD1Q9UGQ2 172 aa14.16□□□□□ -0.14
CXCL3-201ENST00000296026 KCNIP3Q9Y2W7 256 aa14.16□□□□□ -0.14
CXCL3-201ENST00000296026 IGHV4-4A0A075B6R2 117 aa14.15□□□□□ -0.14
CXCL3-201ENST00000296026 CTDSPLO15194 276 aa14.15□□□□□ -0.14
CXCL3-201ENST00000296026 GSTZ1O43708 216 aaPredicted RBP14.15□□□□□ -0.14
CXCL3-201ENST00000296026 PSG1P11464 419 aa14.15□□□□□ -0.14
CXCL3-201ENST00000296026 NUTF2P61970 127 aaKnown RBP14.15□□□□□ -0.14
CXCL3-201ENST00000296026 CLVS1Q8IUQ0 354 aaPredicted RBP14.15□□□□□ -0.14
CXCL3-201ENST00000296026 C1QTNF4Q9BXJ3 329 aa14.15□□□□□ -0.14
CXCL3-201ENST00000296026 SEPSECSQ9HD40 501 aaKnown RBP14.15□□□□□ -0.14
CXCL3-201ENST00000296026 CELA1Q9UNI1 258 aa14.15□□□□□ -0.14
CXCL3-201ENST00000296026 OR51G1Q8NGK1 321 aa14.14□□□□□ -0.15
CXCL3-201ENST00000296026 KRTAP17-1Q9BYP8 105 aa14.14□□□□□ -0.15
CXCL3-201ENST00000296026 XCL2Q9UBD3 114 aa14.14□□□□□ -0.15
CXCL3-201ENST00000296026 U3KQ87 197 aa14.14□□□□□ -0.15
CXCL3-201ENST00000296026 ANKRD20A5PA0PJZ0 165 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms