RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 TSSC4Q9Y5U2 329 aaPredicted RBP16.81■□□□□ 0.28
PDLIM3-203ENST00000284771 UBE2L5PA0A1B0GUS4 154 aa16.81■□□□□ 0.28
PDLIM3-203ENST00000284771 IGKV1-17P01599 117 aa16.81■□□□□ 0.28
PDLIM3-203ENST00000284771 LGALS1P09382 135 aaKnown RBP16.81■□□□□ 0.28
PDLIM3-203ENST00000284771 NPBWR1P48145 328 aa16.81■□□□□ 0.28
PDLIM3-203ENST00000284771 AKR1C1Q04828 323 aa16.81■□□□□ 0.28
PDLIM3-203ENST00000284771 CITED1Q99966 193 aa16.81■□□□□ 0.28
PDLIM3-203ENST00000284771 WDR83OSQ9Y284 106 aa16.81■□□□□ 0.28
PDLIM3-203ENST00000284771 BOLA1Q9Y3E2 137 aa16.81■□□□□ 0.28
PDLIM3-203ENST00000284771 A0A1W2PRX2 142 aa16.8■□□□□ 0.28
PDLIM3-203ENST00000284771 GNG7O60262 68 aa16.8■□□□□ 0.28
PDLIM3-203ENST00000284771 HNRNPCP07910 306 aaKnown RBP eCLIP16.8■□□□□ 0.28
PDLIM3-203ENST00000284771 DEFB136Q30KP8 78 aa16.8■□□□□ 0.28
PDLIM3-203ENST00000284771 RPL7L1Q6DKI1 246 aaKnown RBP16.8■□□□□ 0.28
PDLIM3-203ENST00000284771 THAP8Q8NA92 274 aa16.8■□□□□ 0.28
PDLIM3-203ENST00000284771 C4orf3Q8WVX3 66 aa16.8■□□□□ 0.28
PDLIM3-203ENST00000284771 ZNF90Q03938 601 aa16.79■□□□□ 0.28
PDLIM3-203ENST00000284771 TMEM182Q6ZP80 229 aaPredicted RBP16.79■□□□□ 0.28
PDLIM3-203ENST00000284771 KLHL30-AS1Q8NEE0 82 aa16.79■□□□□ 0.28
PDLIM3-203ENST00000284771 PEF1Q9UBV8 284 aaKnown RBP16.79■□□□□ 0.28
PDLIM3-203ENST00000284771 BMPR1BO00238 502 aa16.78■□□□□ 0.28
PDLIM3-203ENST00000284771 TGOLN2O43493 480 aa16.78■□□□□ 0.28
PDLIM3-203ENST00000284771 DFFBO76075 338 aa16.78■□□□□ 0.28
PDLIM3-203ENST00000284771 OR10J1P30954 320 aa16.78■□□□□ 0.28
PDLIM3-203ENST00000284771 TIGITQ495A1 244 aa16.78■□□□□ 0.28
PDLIM3-203ENST00000284771 TEPPQ6URK8 271 aa16.78■□□□□ 0.28
PDLIM3-203ENST00000284771 C8orf86Q6ZUL3 223 aa16.78■□□□□ 0.28
PDLIM3-203ENST00000284771 ATP6V0BQ99437 205 aa16.78■□□□□ 0.28
PDLIM3-203ENST00000284771 MGST2Q99735 147 aa16.78■□□□□ 0.28
PDLIM3-203ENST00000284771 MDFIQ99750 246 aa16.78■□□□□ 0.28
PDLIM3-203ENST00000284771 ARPC5LQ9BPX5 153 aa16.78■□□□□ 0.28
PDLIM3-203ENST00000284771 WDR61Q9GZS3 305 aaKnown RBP16.78■□□□□ 0.28
PDLIM3-203ENST00000284771 RUNX1Q01196 453 aa16.78■□□□□ 0.28
PDLIM3-203ENST00000284771 BTNL8Q6UX41 500 aa16.78■□□□□ 0.28
PDLIM3-203ENST00000284771 RFNGQ9Y644 331 aa16.78■□□□□ 0.28
PDLIM3-203ENST00000284771 IGHV4OR15-8A0A075B7B6 117 aa16.77■□□□□ 0.28
PDLIM3-203ENST00000284771 A0A087WW49 117 aa16.77■□□□□ 0.28
PDLIM3-203ENST00000284771 IGHV3-35A0A0C4DH35 117 aa16.77■□□□□ 0.28
PDLIM3-203ENST00000284771 ZFP92A6NM28 416 aa16.77■□□□□ 0.28
PDLIM3-203ENST00000284771 TAAR5O14804 337 aa16.77■□□□□ 0.28
PDLIM3-203ENST00000284771 BCL2L11O43521 198 aa16.77■□□□□ 0.28
PDLIM3-203ENST00000284771 ARL3P36405 182 aa16.77■□□□□ 0.28
PDLIM3-203ENST00000284771 DUX3Q96PT4 197 aa16.77■□□□□ 0.28
PDLIM3-203ENST00000284771 GATA2P23769 480 aaPredicted RBP16.76■□□□□ 0.27
PDLIM3-203ENST00000284771 OR11H1Q8NG94 326 aa16.76■□□□□ 0.27
PDLIM3-203ENST00000284771 PPP1R14BQ96C90 147 aa16.76■□□□□ 0.27
PDLIM3-203ENST00000284771 WNK1Q9H4A3 2382 aa16.75■□□□□ 0.27
PDLIM3-203ENST00000284771 NUDT19A8MXV4 375 aa16.75■□□□□ 0.27
PDLIM3-203ENST00000284771 AGPAT2O15120 278 aa16.75■□□□□ 0.27
PDLIM3-203ENST00000284771 OR2C1O95371 312 aa16.75■□□□□ 0.27
PDLIM3-203ENST00000284771 FGF7P21781 194 aa16.75■□□□□ 0.27
PDLIM3-203ENST00000284771 ZNF266Q14584 549 aa16.75■□□□□ 0.27
PDLIM3-203ENST00000284771 OPCMLQ14982 345 aa16.75■□□□□ 0.27
PDLIM3-203ENST00000284771 NSUN5P1Q3KNT7 163 aa16.75■□□□□ 0.27
PDLIM3-203ENST00000284771 TRGV9Q99603 122 aa16.75■□□□□ 0.27
PDLIM3-203ENST00000284771 NPCDR1Q9BY65 106 aa16.75■□□□□ 0.27
PDLIM3-203ENST00000284771 GAR1Q9NY12 217 aaKnown RBP16.75■□□□□ 0.27
PDLIM3-203ENST00000284771 TRAV30A0A087WSZ9 112 aa16.75■□□□□ 0.27
PDLIM3-203ENST00000284771 KANTRA0A1W2PQU2 76 aa16.75■□□□□ 0.27
PDLIM3-203ENST00000284771 NUPL2O15504 423 aaKnown RBP16.75■□□□□ 0.27
PDLIM3-203ENST00000284771 SPSB3Q6PJ21 355 aa16.75■□□□□ 0.27
PDLIM3-203ENST00000284771 NDUFA11Q86Y39 141 aa16.75■□□□□ 0.27
PDLIM3-203ENST00000284771 RAX2Q96IS3 184 aa16.75■□□□□ 0.27
PDLIM3-203ENST00000284771 RSG1Q9BU20 258 aa16.75■□□□□ 0.27
PDLIM3-203ENST00000284771 ZNF747Q9BV97 191 aa16.75■□□□□ 0.27
PDLIM3-203ENST00000284771 PARD6GQ9BYG4 376 aaPredicted RBP16.75■□□□□ 0.27
PDLIM3-203ENST00000284771 IFNA5P01569 189 aa16.74■□□□□ 0.27
PDLIM3-203ENST00000284771 HSPB1P04792 205 aaKnown RBP16.74■□□□□ 0.27
PDLIM3-203ENST00000284771 HSD17B11Q8NBQ5 300 aa16.74■□□□□ 0.27
PDLIM3-203ENST00000284771 JTBO76095 146 aa16.73■□□□□ 0.27
PDLIM3-203ENST00000284771 PSG1P11464 419 aa16.73■□□□□ 0.27
PDLIM3-203ENST00000284771 CAMLGP49069 296 aa16.73■□□□□ 0.27
PDLIM3-203ENST00000284771 YPEL3P61236 119 aaPredicted RBP16.73■□□□□ 0.27
PDLIM3-203ENST00000284771 FAM209BQ5JX69 171 aa16.73■□□□□ 0.27
PDLIM3-203ENST00000284771 GGTLC1Q9BX51 225 aa16.73■□□□□ 0.27
PDLIM3-203ENST00000284771 ZNF471Q9BX82 626 aaPredicted RBP16.73■□□□□ 0.27
PDLIM3-203ENST00000284771 SLC45A2Q9UMX9 530 aa16.73■□□□□ 0.27
PDLIM3-203ENST00000284771 GGCTO75223 188 aaKnown RBP16.72■□□□□ 0.27
PDLIM3-203ENST00000284771 C12orf54Q6X4T0 127 aa16.72■□□□□ 0.27
PDLIM3-203ENST00000284771 CYP2G1PQ6ZSU1 146 aa16.72■□□□□ 0.27
PDLIM3-203ENST00000284771 OR1N2Q8NGR9 330 aa16.72■□□□□ 0.27
PDLIM3-203ENST00000284771 ARV1Q9H2C2 271 aa16.72■□□□□ 0.27
PDLIM3-203ENST00000284771 MPDU1O75352 247 aa16.72■□□□□ 0.27
PDLIM3-203ENST00000284771 LINC00869P0C866 280 aa16.72■□□□□ 0.27
PDLIM3-203ENST00000284771 RIPPLY3P57055 190 aa16.72■□□□□ 0.27
PDLIM3-203ENST00000284771 MIC13Q5XKP0 118 aa16.72■□□□□ 0.27
PDLIM3-203ENST00000284771 C3orf56Q8N813 242 aa16.72■□□□□ 0.27
PDLIM3-203ENST00000284771 SCGB1C1Q8TD33 95 aa16.72■□□□□ 0.27
PDLIM3-203ENST00000284771 BORCS7-ASMTA0A0B4J1R7 106 aa16.71■□□□□ 0.27
PDLIM3-203ENST00000284771 RD3LP0DJH9 198 aa16.71■□□□□ 0.27
PDLIM3-203ENST00000284771 ATP6V0CP27449 155 aa16.71■□□□□ 0.27
PDLIM3-203ENST00000284771 HOXD3P31249 432 aaPredicted RBP16.71■□□□□ 0.27
PDLIM3-203ENST00000284771 FHL3Q13643 280 aa16.71■□□□□ 0.27
PDLIM3-203ENST00000284771 UNQ9165/PRO28630Q6UXU0 137 aa16.71■□□□□ 0.27
PDLIM3-203ENST00000284771 BPIFCQ8NFQ6 507 aa16.71■□□□□ 0.27
PDLIM3-203ENST00000284771 RCC1LQ96I51 464 aaKnown RBP16.71■□□□□ 0.27
PDLIM3-203ENST00000284771 SH3BGRL3Q9H299 93 aa16.71■□□□□ 0.27
PDLIM3-203ENST00000284771 PUS1Q9Y606 427 aaKnown RBP eCLIP16.71■□□□□ 0.27
PDLIM3-203ENST00000284771 TRRAPQ9Y4A5 3859 aa16.71■□□□□ 0.26
PDLIM3-203ENST00000284771 IGHV3OR16-8A0A075B7F1 116 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms