RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 GPR141Q7Z602 305 aa8.95□□□□□ -0.98
TRAF4-202ENST00000262396 OR52E5Q8NH55 327 aa8.95□□□□□ -0.98
TRAF4-202ENST00000262396 RNASEH2CQ8TDP1 164 aaKnown RBP8.95□□□□□ -0.98
TRAF4-202ENST00000262396 SCGB3A2Q96PL1 93 aa8.95□□□□□ -0.98
TRAF4-202ENST00000262396 ABHD1Q96SE0 405 aa8.95□□□□□ -0.98
TRAF4-202ENST00000262396 NAA50Q9GZZ1 169 aaKnown RBP8.95□□□□□ -0.98
TRAF4-202ENST00000262396 TMEM222Q9H0R3 208 aa8.95□□□□□ -0.98
TRAF4-202ENST00000262396 FNDC4Q9H6D8 234 aaPredicted RBP8.95□□□□□ -0.98
TRAF4-202ENST00000262396 TBC1D24Q9ULP9 559 aa8.95□□□□□ -0.98
TRAF4-202ENST00000262396 IGHV4-28A0A0C4DH34 117 aa8.94□□□□□ -0.98
TRAF4-202ENST00000262396 A0A0G2JRQ6 117 aa8.94□□□□□ -0.98
TRAF4-202ENST00000262396 NOL3O60936 208 aaKnown RBP8.94□□□□□ -0.98
TRAF4-202ENST00000262396 CDS2O95674 445 aa8.94□□□□□ -0.98
TRAF4-202ENST00000262396 CD74P04233 296 aa8.94□□□□□ -0.98
TRAF4-202ENST00000262396 RD3LP0DJH9 198 aa8.94□□□□□ -0.98
TRAF4-202ENST00000262396 NPY1RP25929 384 aa8.94□□□□□ -0.98
TRAF4-202ENST00000262396 SSBP1Q04837 148 aaKnown RBP8.94□□□□□ -0.98
TRAF4-202ENST00000262396 SURF2Q15527 256 aaPredicted RBP8.94□□□□□ -0.98
TRAF4-202ENST00000262396 FAAP20Q6NZ36 180 aa8.94□□□□□ -0.98
TRAF4-202ENST00000262396 PPP1R14BQ96C90 147 aa8.94□□□□□ -0.98
TRAF4-202ENST00000262396 DIRAS2Q96HU8 199 aa8.94□□□□□ -0.98
TRAF4-202ENST00000262396 PRRT1Q99946 306 aa8.94□□□□□ -0.98
TRAF4-202ENST00000262396 PBDC1Q9BVG4 233 aa8.94□□□□□ -0.98
TRAF4-202ENST00000262396 C1QTNF4Q9BXJ3 329 aa8.94□□□□□ -0.98
TRAF4-202ENST00000262396 MCUBQ9NWR8 336 aa8.94□□□□□ -0.98
TRAF4-202ENST00000262396 CLEC5AQ9NY25 188 aa8.94□□□□□ -0.98
TRAF4-202ENST00000262396 SCP2D1Q9UJQ7 156 aa8.94□□□□□ -0.98
TRAF4-202ENST00000262396 TRAV10A0A0B4J240 114 aa8.93□□□□□ -0.98
TRAF4-202ENST00000262396 P0C879 139 aa8.93□□□□□ -0.98
TRAF4-202ENST00000262396 SULT1A3P0DMM9 295 aa8.93□□□□□ -0.98
TRAF4-202ENST00000262396 SULT1A4P0DMN0 295 aa8.93□□□□□ -0.98
TRAF4-202ENST00000262396 ANXA3P12429 323 aa8.93□□□□□ -0.98
TRAF4-202ENST00000262396 HLA-DMBP28068 263 aa8.93□□□□□ -0.98
TRAF4-202ENST00000262396 NUP62P37198 522 aaPredicted RBP8.93□□□□□ -0.98
TRAF4-202ENST00000262396 C2orf83Q53S99 150 aa8.93□□□□□ -0.98
TRAF4-202ENST00000262396 TRPT1Q86TN4 253 aaKnown RBP8.93□□□□□ -0.98
TRAF4-202ENST00000262396 CLVS1Q8IUQ0 354 aaPredicted RBP8.93□□□□□ -0.98
TRAF4-202ENST00000262396 SELENOHQ8IZQ5 122 aaKnown RBP8.93□□□□□ -0.98
TRAF4-202ENST00000262396 NPIPB3Q92617 1050 aa8.93□□□□□ -0.98
TRAF4-202ENST00000262396 GPR146Q96CH1 333 aa8.93□□□□□ -0.98
TRAF4-202ENST00000262396 MRPL36Q9P0J6 103 aaKnown RBP8.93□□□□□ -0.98
TRAF4-202ENST00000262396 PAIP2BQ9ULR5 123 aaKnown RBP8.93□□□□□ -0.98
TRAF4-202ENST00000262396 ZFP92A6NM28 416 aa8.92□□□□□ -0.98
TRAF4-202ENST00000262396 IGKV1-17P01599 117 aa8.92□□□□□ -0.98
TRAF4-202ENST00000262396 FABP1P07148 127 aa8.92□□□□□ -0.98
TRAF4-202ENST00000262396 IGLC1P0CG04 106 aa8.92□□□□□ -0.98
TRAF4-202ENST00000262396 AKR1C4P17516 323 aa8.92□□□□□ -0.98
TRAF4-202ENST00000262396 YPEL3P61236 119 aaPredicted RBP8.92□□□□□ -0.98
TRAF4-202ENST00000262396 CTF1Q16619 201 aa8.92□□□□□ -0.98
TRAF4-202ENST00000262396 PRSS54Q6PEW0 395 aa8.92□□□□□ -0.98
TRAF4-202ENST00000262396 SIGLEC15Q6ZMC9 328 aa8.92□□□□□ -0.98
TRAF4-202ENST00000262396 Q6ZRM9 215 aa8.92□□□□□ -0.98
TRAF4-202ENST00000262396 GLYATL2Q8WU03 294 aa8.92□□□□□ -0.98
TRAF4-202ENST00000262396 RAB40CQ96S21 281 aa8.92□□□□□ -0.98
TRAF4-202ENST00000262396 HRH4Q9H3N8 390 aa8.92□□□□□ -0.98
TRAF4-202ENST00000262396 RABL2AQ9UBK7 228 aaPredicted RBP8.92□□□□□ -0.98
TRAF4-202ENST00000262396 RABL2BQ9UNT1 228 aa8.92□□□□□ -0.98
TRAF4-202ENST00000262396 PIGBOS1A0A0B4J2F0 54 aa8.91□□□□□ -0.98
TRAF4-202ENST00000262396 CRYM-AS1A6NIL9 109 aa8.91□□□□□ -0.98
TRAF4-202ENST00000262396 CTDSP2O14595 271 aa8.91□□□□□ -0.98
TRAF4-202ENST00000262396 ID1P41134 155 aa8.91□□□□□ -0.98
TRAF4-202ENST00000262396 KLF9Q13886 244 aaPredicted RBP8.91□□□□□ -0.98
TRAF4-202ENST00000262396 PVRIGQ6DKI7 326 aa8.91□□□□□ -0.98
TRAF4-202ENST00000262396 C16orf54Q6UWD8 224 aa8.91□□□□□ -0.98
TRAF4-202ENST00000262396 LGI3Q8N145 548 aa8.91□□□□□ -0.98
TRAF4-202ENST00000262396 Q8NAQ8 132 aa8.91□□□□□ -0.98
TRAF4-202ENST00000262396 OR51S1Q8NGJ8 323 aa8.91□□□□□ -0.98
TRAF4-202ENST00000262396 OR4C16Q8NGL9 310 aa8.91□□□□□ -0.98
TRAF4-202ENST00000262396 OR1S1Q8NH92 325 aa8.91□□□□□ -0.98
TRAF4-202ENST00000262396 COQ8AQ8NI60 647 aa8.91□□□□□ -0.98
TRAF4-202ENST00000262396 SMIM4Q8WVI0 70 aa8.91□□□□□ -0.98
TRAF4-202ENST00000262396 SLC35E1Q96K37 410 aa8.91□□□□□ -0.98
TRAF4-202ENST00000262396 LINC00052Q96N35 136 aa8.91□□□□□ -0.98
TRAF4-202ENST00000262396 RTBDNQ9BSG5 229 aaPredicted RBP8.91□□□□□ -0.98
TRAF4-202ENST00000262396 MRPS26Q9BYN8 205 aaKnown RBP8.91□□□□□ -0.98
TRAF4-202ENST00000262396 NRN1Q9NPD7 142 aa8.91□□□□□ -0.98
TRAF4-202ENST00000262396 XCL2Q9UBD3 114 aa8.91□□□□□ -0.98
TRAF4-202ENST00000262396 U3KQ87 197 aa8.91□□□□□ -0.98
TRAF4-202ENST00000262396 IGHV3OR16-12A0A075B7B8 117 aa8.9□□□□□ -0.98
TRAF4-202ENST00000262396 TOMM40O96008 361 aa8.9□□□□□ -0.98
TRAF4-202ENST00000262396 IGKV3-20P01619 116 aa8.9□□□□□ -0.98
TRAF4-202ENST00000262396 RBMY1A1P0DJD3 496 aaKnown RBP8.9□□□□□ -0.98
TRAF4-202ENST00000262396 RBMY1CP0DJD4 496 aa8.9□□□□□ -0.98
TRAF4-202ENST00000262396 C4BPBP20851 252 aa8.9□□□□□ -0.98
TRAF4-202ENST00000262396 FAUP35544 74 aaKnown RBP8.9□□□□□ -0.98
TRAF4-202ENST00000262396 CCR6P51684 374 aa8.9□□□□□ -0.98
TRAF4-202ENST00000262396 SRPXP78539 464 aa8.9□□□□□ -0.98
TRAF4-202ENST00000262396 RBMY1FQ15415 496 aaKnown RBP8.9□□□□□ -0.98
TRAF4-202ENST00000262396 BSXQ3C1V8 233 aa8.9□□□□□ -0.98
TRAF4-202ENST00000262396 Q6ZTC4 211 aa8.9□□□□□ -0.98
TRAF4-202ENST00000262396 OR51G1Q8NGK1 321 aa8.9□□□□□ -0.98
TRAF4-202ENST00000262396 LHFPL5Q8TAF8 219 aa8.9□□□□□ -0.98
TRAF4-202ENST00000262396 DTD1Q8TEA8 209 aa8.9□□□□□ -0.98
TRAF4-202ENST00000262396 DCANP1Q8TF63 244 aa8.9□□□□□ -0.98
TRAF4-202ENST00000262396 RSL24D1Q9UHA3 163 aaKnown RBP8.9□□□□□ -0.98
TRAF4-202ENST00000262396 GPR132Q9UNW8 380 aa8.9□□□□□ -0.98
TRAF4-202ENST00000262396 IGHV4-4A0A075B6R2 117 aa8.89□□□□□ -0.99
TRAF4-202ENST00000262396 DEFB131BA0A096LNP1 70 aa8.89□□□□□ -0.99
TRAF4-202ENST00000262396 FAM90A26D6RGX4 464 aa8.89□□□□□ -0.99
TRAF4-202ENST00000262396 PSG1P11464 419 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms