RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 CD74P04233 296 aa15.46■□□□□ 0.07
NEDD8-201ENST00000250495 SSBP1Q04837 148 aaKnown RBP15.46■□□□□ 0.07
NEDD8-201ENST00000250495 SCGB2B2Q4G0G5 96 aa15.46■□□□□ 0.07
NEDD8-201ENST00000250495 OR11H2Q8NH07 326 aa15.46■□□□□ 0.07
NEDD8-201ENST00000250495 IGHV3-66A0A0C4DH42 116 aa15.45■□□□□ 0.06
NEDD8-201ENST00000250495 A0A1B0GU03 582 aa15.45■□□□□ 0.06
NEDD8-201ENST00000250495 BTCP35070 178 aa15.45■□□□□ 0.06
NEDD8-201ENST00000250495 OPRK1P41145 380 aa15.45■□□□□ 0.06
NEDD8-201ENST00000250495 DEFB131AP59861 70 aa15.45■□□□□ 0.06
NEDD8-201ENST00000250495 OR4D10Q8NGI6 311 aa15.45■□□□□ 0.06
NEDD8-201ENST00000250495 OR13C8Q8NGS7 320 aa15.45■□□□□ 0.06
NEDD8-201ENST00000250495 OR4X1Q8NH49 305 aa15.45■□□□□ 0.06
NEDD8-201ENST00000250495 CA1P00915 261 aaPredicted RBP15.44■□□□□ 0.06
NEDD8-201ENST00000250495 STEAP1BQ6NZ63 245 aa15.44■□□□□ 0.06
NEDD8-201ENST00000250495 FAM219AQ8IW50 185 aa15.44■□□□□ 0.06
NEDD8-201ENST00000250495 MARCH1Q8TCQ1 289 aa15.44■□□□□ 0.06
NEDD8-201ENST00000250495 TMEM230Q96A57 120 aa15.44■□□□□ 0.06
NEDD8-201ENST00000250495 METTL26Q96S19 204 aa15.44■□□□□ 0.06
NEDD8-201ENST00000250495 MFFQ9GZY8 342 aa15.44■□□□□ 0.06
NEDD8-201ENST00000250495 FNDC4Q9H6D8 234 aaPredicted RBP15.44■□□□□ 0.06
NEDD8-201ENST00000250495 TRAV30A0A087WSZ9 112 aa15.43■□□□□ 0.06
NEDD8-201ENST00000250495 ANKRD20A5PA0PJZ0 165 aa15.43■□□□□ 0.06
NEDD8-201ENST00000250495 CDS2O95674 445 aa15.43■□□□□ 0.06
NEDD8-201ENST00000250495 SPCS3P61009 180 aa15.43■□□□□ 0.06
NEDD8-201ENST00000250495 TMEM187Q14656 261 aa15.43■□□□□ 0.06
NEDD8-201ENST00000250495 MLANAQ16655 118 aa15.43■□□□□ 0.06
NEDD8-201ENST00000250495 LEMD1Q68G75 181 aa15.43■□□□□ 0.06
NEDD8-201ENST00000250495 OR52E5Q8NH55 327 aa15.43■□□□□ 0.06
NEDD8-201ENST00000250495 C11orf45Q8TAV5 145 aa15.43■□□□□ 0.06
NEDD8-201ENST00000250495 NARS2Q96I59 477 aaKnown RBP15.43■□□□□ 0.06
NEDD8-201ENST00000250495 C11orf68Q9H3H3 251 aaKnown RBP15.43■□□□□ 0.06
NEDD8-201ENST00000250495 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.43■□□□□ 0.06
NEDD8-201ENST00000250495 RABAC1Q9UI14 185 aa15.43■□□□□ 0.06
NEDD8-201ENST00000250495 C14orf166Q9Y224 244 aaKnown RBP15.43■□□□□ 0.06
NEDD8-201ENST00000250495 A0A0G2JRQ6 117 aa15.42■□□□□ 0.06
NEDD8-201ENST00000250495 IFNA4P05014 189 aa15.42■□□□□ 0.06
NEDD8-201ENST00000250495 CRYBB3P26998 211 aa15.42■□□□□ 0.06
NEDD8-201ENST00000250495 MEF2DQ14814 521 aa15.42■□□□□ 0.06
NEDD8-201ENST00000250495 BSXQ3C1V8 233 aa15.42■□□□□ 0.06
NEDD8-201ENST00000250495 Q6ZRM9 215 aa15.42■□□□□ 0.06
NEDD8-201ENST00000250495 STHQ8IWL8 128 aa15.42■□□□□ 0.06
NEDD8-201ENST00000250495 TMEM222Q9H0R3 208 aa15.42■□□□□ 0.06
NEDD8-201ENST00000250495 MRPL36Q9P0J6 103 aaKnown RBP15.42■□□□□ 0.06
NEDD8-201ENST00000250495 TEX13DA0A0J9YY54 714 aaPredicted RBP15.41■□□□□ 0.06
NEDD8-201ENST00000250495 RPS10-NUDT3A0A1W2PQS6 291 aa15.41■□□□□ 0.06
NEDD8-201ENST00000250495 INMT-MINDY4F8WBC2 141 aa15.41■□□□□ 0.06
NEDD8-201ENST00000250495 HTR2BP41595 481 aa15.41■□□□□ 0.06
NEDD8-201ENST00000250495 AARDQ4LEZ3 155 aa15.41■□□□□ 0.06
NEDD8-201ENST00000250495 DISC1C4P0D8 188 aa15.4■□□□□ 0.06
NEDD8-201ENST00000250495 CCNKO75909 580 aa15.4■□□□□ 0.06
NEDD8-201ENST00000250495 OR5AC1P0C628 307 aa15.4■□□□□ 0.06
NEDD8-201ENST00000250495 FAUP35544 74 aaKnown RBP15.4■□□□□ 0.06
NEDD8-201ENST00000250495 NANOS2P60321 138 aaKnown RBP15.4■□□□□ 0.06
NEDD8-201ENST00000250495 DHODHQ02127 395 aa15.4■□□□□ 0.06
NEDD8-201ENST00000250495 RBMS2Q15434 407 aaKnown RBP15.4■□□□□ 0.06
NEDD8-201ENST00000250495 SURF2Q15527 256 aaPredicted RBP15.4■□□□□ 0.06
NEDD8-201ENST00000250495 LGALS9CQ6DKI2 356 aa15.4■□□□□ 0.06
NEDD8-201ENST00000250495 FAM24BQ8N5W8 94 aa15.4■□□□□ 0.06
NEDD8-201ENST00000250495 STXBP6Q8NFX7 210 aa15.4■□□□□ 0.06
NEDD8-201ENST00000250495 GLYATL2Q8WU03 294 aa15.4■□□□□ 0.06
NEDD8-201ENST00000250495 GRAMD2BQ96HH9 432 aa15.4■□□□□ 0.06
NEDD8-201ENST00000250495 RTBDNQ9BSG5 229 aaPredicted RBP15.4■□□□□ 0.06
NEDD8-201ENST00000250495 NAA60Q9H7X0 242 aa15.4■□□□□ 0.06
NEDD8-201ENST00000250495 HEYLQ9NQ87 328 aaPredicted RBP15.4■□□□□ 0.06
NEDD8-201ENST00000250495 K7EQG2 157 aa15.39■□□□□ 0.05
NEDD8-201ENST00000250495 TCRBP04435 133 aa15.39■□□□□ 0.05
NEDD8-201ENST00000250495 P2RY1P47900 373 aa15.39■□□□□ 0.05
NEDD8-201ENST00000250495 TIGITQ495A1 244 aa15.39■□□□□ 0.05
NEDD8-201ENST00000250495 TMEM41BQ5BJD5 291 aa15.39■□□□□ 0.05
NEDD8-201ENST00000250495 RBPMSQ93062 196 aaKnown RBP15.39■□□□□ 0.05
NEDD8-201ENST00000250495 FBXL17Q9UF56 701 aa15.39■□□□□ 0.05
NEDD8-201ENST00000250495 C7orf66A4D0T2 115 aa15.38■□□□□ 0.05
NEDD8-201ENST00000250495 IGKV1-17P01599 117 aa15.38■□□□□ 0.05
NEDD8-201ENST00000250495 SLC25A4P12235 298 aa15.38■□□□□ 0.05
NEDD8-201ENST00000250495 EIF2B2P49770 351 aaKnown RBP15.38■□□□□ 0.05
NEDD8-201ENST00000250495 SELENOHQ8IZQ5 122 aaKnown RBP15.38■□□□□ 0.05
NEDD8-201ENST00000250495 Q8WTZ3 238 aa15.38■□□□□ 0.05
NEDD8-201ENST00000250495 CACFD1Q9UGQ2 172 aa15.38■□□□□ 0.05
NEDD8-201ENST00000250495 ALG5Q9Y673 324 aa15.38■□□□□ 0.05
NEDD8-201ENST00000250495 CD300CQ08708 224 aa15.37■□□□□ 0.05
NEDD8-201ENST00000250495 C2orf83Q53S99 150 aa15.37■□□□□ 0.05
NEDD8-201ENST00000250495 FAAP20Q6NZ36 180 aa15.37■□□□□ 0.05
NEDD8-201ENST00000250495 OR1S2Q8NGQ3 325 aa15.37■□□□□ 0.05
NEDD8-201ENST00000250495 LHFPL5Q8TAF8 219 aa15.37■□□□□ 0.05
NEDD8-201ENST00000250495 RNASEH2CQ8TDP1 164 aaKnown RBP15.37■□□□□ 0.05
NEDD8-201ENST00000250495 GPR146Q96CH1 333 aa15.37■□□□□ 0.05
NEDD8-201ENST00000250495 NUDT15Q9NV35 164 aa15.37■□□□□ 0.05
NEDD8-201ENST00000250495 CACNG5Q9UF02 275 aa15.37■□□□□ 0.05
NEDD8-201ENST00000250495 GPR132Q9UNW8 380 aa15.37■□□□□ 0.05
NEDD8-201ENST00000250495 AGRNO00468 2067 aa15.36■□□□□ 0.05
NEDD8-201ENST00000250495 HELTA6NFD8 242 aa15.36■□□□□ 0.05
NEDD8-201ENST00000250495 AKAIN1P0CW23 69 aa15.36■□□□□ 0.05
NEDD8-201ENST00000250495 AP2S1P53680 142 aaPredicted RBP15.36■□□□□ 0.05
NEDD8-201ENST00000250495 ETFRF1Q6IPR1 90 aa15.36■□□□□ 0.05
NEDD8-201ENST00000250495 PRSS54Q6PEW0 395 aa15.36■□□□□ 0.05
NEDD8-201ENST00000250495 MORN3Q6PF18 240 aaPredicted RBP15.36■□□□□ 0.05
NEDD8-201ENST00000250495 NOXA1Q86UR1 476 aa15.36■□□□□ 0.05
NEDD8-201ENST00000250495 KMT2AQ03164 3969 aa15.35■□□□□ 0.05
NEDD8-201ENST00000250495 CRYM-AS1A6NIL9 109 aa15.35■□□□□ 0.05
NEDD8-201ENST00000250495 CEBPZOSA8MTT3 80 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms