RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 NBR2O15453 112 aa13.01□□□□□ -0.33
SIN3B-201ENST00000248054 IGKV1D-33P01593 117 aa13.01□□□□□ -0.33
SIN3B-201ENST00000248054 IGKV1-33P01594 117 aa13.01□□□□□ -0.33
SIN3B-201ENST00000248054 NTF4P34130 210 aa13.01□□□□□ -0.33
SIN3B-201ENST00000248054 RAB37Q96AX2 223 aa13.01□□□□□ -0.33
SIN3B-201ENST00000248054 IGKV1D-17A0A075B6S4 117 aa13.01□□□□□ -0.33
SIN3B-201ENST00000248054 REG1AP05451 166 aa13.01□□□□□ -0.33
SIN3B-201ENST00000248054 PLP1P60201 277 aa13.01□□□□□ -0.33
SIN3B-201ENST00000248054 CX3CL1P78423 397 aa13.01□□□□□ -0.33
SIN3B-201ENST00000248054 PAPPA-AS1Q5QFB9 102 aa13.01□□□□□ -0.33
SIN3B-201ENST00000248054 C20orf204Q6ZNR8 217 aa13.01□□□□□ -0.33
SIN3B-201ENST00000248054 ACACAQ13085 2346 aa13.01□□□□□ -0.33
SIN3B-201ENST00000248054 CACNA1HO95180 2353 aa13.01□□□□□ -0.33
SIN3B-201ENST00000248054 PF4V1P10720 104 aa13.01□□□□□ -0.33
SIN3B-201ENST00000248054 LY6DQ14210 128 aa13.01□□□□□ -0.33
SIN3B-201ENST00000248054 EFNA4P52798 201 aa13□□□□□ -0.33
SIN3B-201ENST00000248054 DSCR9P59020 149 aa13□□□□□ -0.33
SIN3B-201ENST00000248054 OSTCQ9NRP0 149 aa13□□□□□ -0.33
SIN3B-201ENST00000248054 CEP250Q9BV73 2442 aa13□□□□□ -0.33
SIN3B-201ENST00000248054 SPSB3Q6PJ21 355 aa13□□□□□ -0.33
SIN3B-201ENST00000248054 ZCCHC24Q8N2G6 241 aaKnown RBP13□□□□□ -0.33
SIN3B-201ENST00000248054 NUDT3O95989 172 aa13□□□□□ -0.33
SIN3B-201ENST00000248054 GOLT1AQ6ZVE7 132 aa13□□□□□ -0.33
SIN3B-201ENST00000248054 CIARTQ8N365 385 aaPredicted RBP13□□□□□ -0.33
SIN3B-201ENST00000248054 ORAOV1Q8WV07 137 aa13□□□□□ -0.33
SIN3B-201ENST00000248054 ARPC1AQ92747 370 aa13□□□□□ -0.33
SIN3B-201ENST00000248054 RPP21Q9H633 154 aaKnown RBP13□□□□□ -0.33
SIN3B-201ENST00000248054 WDR83OSQ9Y284 106 aa13□□□□□ -0.33
SIN3B-201ENST00000248054 CGAP01215 116 aa13□□□□□ -0.33
SIN3B-201ENST00000248054 IGFBP2P18065 325 aa13□□□□□ -0.33
SIN3B-201ENST00000248054 CFHR2P36980 270 aa13□□□□□ -0.33
SIN3B-201ENST00000248054 TCF15Q12870 199 aa13□□□□□ -0.33
SIN3B-201ENST00000248054 TFF1P04155 84 aa12.99□□□□□ -0.33
SIN3B-201ENST00000248054 OR9G9P0C7N8 305 aa12.99□□□□□ -0.33
SIN3B-201ENST00000248054 ERVK11-1P61568 191 aa12.99□□□□□ -0.33
SIN3B-201ENST00000248054 ACTL10Q5JWF8 245 aa12.99□□□□□ -0.33
SIN3B-201ENST00000248054 TMEM136Q6ZRR5 245 aa12.99□□□□□ -0.33
SIN3B-201ENST00000248054 SCO2A0A1W2PP80 73 aa12.99□□□□□ -0.33
SIN3B-201ENST00000248054 A0A1W2PRE2 83 aa12.99□□□□□ -0.33
SIN3B-201ENST00000248054 UQCRFS1P47985 274 aa12.99□□□□□ -0.33
SIN3B-201ENST00000248054 TM4SF20Q53R12 229 aa12.99□□□□□ -0.33
SIN3B-201ENST00000248054 C2orf83Q53S99 150 aa12.99□□□□□ -0.33
SIN3B-201ENST00000248054 FAM53AQ6NSI3 398 aaPredicted RBP12.99□□□□□ -0.33
SIN3B-201ENST00000248054 Q8NFD4 153 aa12.99□□□□□ -0.33
SIN3B-201ENST00000248054 FAM106AQ4KMX7 169 aa12.99□□□□□ -0.33
SIN3B-201ENST00000248054 TMEM200BQ69YZ2 307 aa12.99□□□□□ -0.33
SIN3B-201ENST00000248054 PPP1R27Q86WC6 154 aa12.99□□□□□ -0.33
SIN3B-201ENST00000248054 MTURNQ8N3F0 131 aa12.99□□□□□ -0.33
SIN3B-201ENST00000248054 ZNF502Q8TBZ5 544 aa12.99□□□□□ -0.33
SIN3B-201ENST00000248054 A0A1B0GUT8 65 aa12.99□□□□□ -0.33
SIN3B-201ENST00000248054 IGHV1-8P0DP01 117 aa12.99□□□□□ -0.33
SIN3B-201ENST00000248054 TSPOP30536 169 aa12.99□□□□□ -0.33
SIN3B-201ENST00000248054 DYNLRB2Q8TF09 96 aa12.99□□□□□ -0.33
SIN3B-201ENST00000248054 PHLDA3Q9Y5J5 127 aa12.99□□□□□ -0.33
SIN3B-201ENST00000248054 A1L4Q6 167 aa12.98□□□□□ -0.33
SIN3B-201ENST00000248054 CDKN1AP38936 164 aa12.98□□□□□ -0.33
SIN3B-201ENST00000248054 KRTAP27-1Q3LI81 207 aa12.98□□□□□ -0.33
SIN3B-201ENST00000248054 METRNQ9UJH8 293 aa12.98□□□□□ -0.33
SIN3B-201ENST00000248054 ST6GALNAC6Q969X2 333 aa12.98□□□□□ -0.33
SIN3B-201ENST00000248054 MEGF9Q9H1U4 602 aa12.98□□□□□ -0.33
SIN3B-201ENST00000248054 IGKV1-5P01602 117 aa12.98□□□□□ -0.33
SIN3B-201ENST00000248054 ATP5G3P48201 142 aa12.98□□□□□ -0.33
SIN3B-201ENST00000248054 FAM90A2PQ658T7 463 aa12.98□□□□□ -0.33
SIN3B-201ENST00000248054 SLC25A48Q6ZT89 311 aaKnown RBP12.98□□□□□ -0.33
SIN3B-201ENST00000248054 NRN1Q9NPD7 142 aa12.98□□□□□ -0.33
SIN3B-201ENST00000248054 M0R1W7 72 aa12.98□□□□□ -0.33
SIN3B-201ENST00000248054 HIST1H4GQ99525 98 aa12.98□□□□□ -0.33
SIN3B-201ENST00000248054 ATP5LO75964 103 aa12.97□□□□□ -0.33
SIN3B-201ENST00000248054 NPPCP23582 126 aa12.97□□□□□ -0.33
SIN3B-201ENST00000248054 CD69Q07108 199 aa12.97□□□□□ -0.33
SIN3B-201ENST00000248054 LYPD6BQ8NI32 183 aa12.97□□□□□ -0.33
SIN3B-201ENST00000248054 GPR82Q96P67 336 aa12.97□□□□□ -0.33
SIN3B-201ENST00000248054 TMEM155Q4W5P6 130 aa12.97□□□□□ -0.33
SIN3B-201ENST00000248054 TMEM14EPQ6UXP3 125 aa12.97□□□□□ -0.33
SIN3B-201ENST00000248054 ZNF414Q96IQ9 312 aa12.97□□□□□ -0.33
SIN3B-201ENST00000248054 VSIRQ9H7M9 311 aa12.97□□□□□ -0.33
SIN3B-201ENST00000248054 J3KRW8 73 aa12.97□□□□□ -0.33
SIN3B-201ENST00000248054 MINOS1Q5TGZ0 78 aa12.97□□□□□ -0.33
SIN3B-201ENST00000248054 C20orf144Q9BQM9 153 aa12.97□□□□□ -0.33
SIN3B-201ENST00000248054 MINOS1-NBL1R4GNA1 71 aa12.97□□□□□ -0.33
SIN3B-201ENST00000248054 IGHV2-26A0A0B4J1V2 119 aa12.97□□□□□ -0.33
SIN3B-201ENST00000248054 A0A1B0GUS0 222 aa12.97□□□□□ -0.33
SIN3B-201ENST00000248054 IL4P05112 153 aa12.97□□□□□ -0.33
SIN3B-201ENST00000248054 C21orf62Q9NYP8 219 aa12.97□□□□□ -0.33
SIN3B-201ENST00000248054 ZNF256Q9Y2P7 627 aaPredicted RBP12.97□□□□□ -0.33
SIN3B-201ENST00000248054 NEUROG1Q92886 237 aa12.96□□□□□ -0.33
SIN3B-201ENST00000248054 RNF166Q96A37 237 aaPredicted RBP12.96□□□□□ -0.33
SIN3B-201ENST00000248054 ZNF581Q9P0T4 197 aa12.96□□□□□ -0.33
SIN3B-201ENST00000248054 A0A1B0GV72 72 aa12.96□□□□□ -0.33
SIN3B-201ENST00000248054 ZNF503-AS2A6NEH8 195 aa12.96□□□□□ -0.33
SIN3B-201ENST00000248054 DLX6P56179 175 aa12.96□□□□□ -0.33
SIN3B-201ENST00000248054 OR10J3Q5JRS4 329 aa12.96□□□□□ -0.33
SIN3B-201ENST00000248054 AMMECR1LQ6DCA0 310 aa12.96□□□□□ -0.33
SIN3B-201ENST00000248054 FAM19A2Q8N3H0 131 aa12.96□□□□□ -0.33
SIN3B-201ENST00000248054 OTORQ9NRC9 128 aa12.96□□□□□ -0.33
SIN3B-201ENST00000248054 PLA2G2EQ9NZK7 142 aa12.96□□□□□ -0.33
SIN3B-201ENST00000248054 FAM215AQ9Y5M1 114 aa12.96□□□□□ -0.33
SIN3B-201ENST00000248054 IGLV3-9A0A075B6K5 115 aa12.96□□□□□ -0.34
SIN3B-201ENST00000248054 PVRIGQ6DKI7 326 aa12.96□□□□□ -0.34
SIN3B-201ENST00000248054 GNB1LQ9BYB4 327 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms