RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 ZNF137PP52743 207 aa13.12□□□□□ -0.31
LTBR-201ENST00000228918 SUB1P53999 127 aaKnown RBP eCLIP13.12□□□□□ -0.31
LTBR-201ENST00000228918 KIAA1644Q3SXP7 199 aa13.12□□□□□ -0.31
LTBR-201ENST00000228918 ZNF329Q86UD4 541 aa13.12□□□□□ -0.31
LTBR-201ENST00000228918 COL25A1Q9BXS0 654 aaPredicted RBP13.12□□□□□ -0.31
LTBR-201ENST00000228918 AMMECR1Q9Y4X0 333 aaPredicted RBP13.12□□□□□ -0.31
LTBR-201ENST00000228918 RNF114Q9Y508 228 aa13.12□□□□□ -0.31
LTBR-201ENST00000228918 IZUMO1RA6ND01 250 aa13.11□□□□□ -0.31
LTBR-201ENST00000228918 BMPR1BO00238 502 aa13.11□□□□□ -0.31
LTBR-201ENST00000228918 GPX1P07203 203 aa13.11□□□□□ -0.31
LTBR-201ENST00000228918 LRRC10Q5BKY1 277 aa13.11□□□□□ -0.31
LTBR-201ENST00000228918 CCL17Q92583 94 aa13.11□□□□□ -0.31
LTBR-201ENST00000228918 CTSZQ9UBR2 303 aa13.11□□□□□ -0.31
LTBR-201ENST00000228918 FBXL7Q9UJT9 491 aa13.11□□□□□ -0.31
LTBR-201ENST00000228918 A0A1W2PPI3 338 aa13.11□□□□□ -0.31
LTBR-201ENST00000228918 PEX7O00628 323 aa13.11□□□□□ -0.31
LTBR-201ENST00000228918 CA1P00915 261 aaPredicted RBP13.11□□□□□ -0.31
LTBR-201ENST00000228918 IGHV3-48P01763 117 aa13.11□□□□□ -0.31
LTBR-201ENST00000228918 LOXP28300 417 aaPredicted RBP13.11□□□□□ -0.31
LTBR-201ENST00000228918 DLX6P56179 175 aa13.11□□□□□ -0.31
LTBR-201ENST00000228918 FAM231DQ6ZW35 169 aa13.11□□□□□ -0.31
LTBR-201ENST00000228918 SIGLECL1Q8N7X8 197 aa13.11□□□□□ -0.31
LTBR-201ENST00000228918 VN1R17PQ8TDU5 208 aa13.11□□□□□ -0.31
LTBR-201ENST00000228918 FXYD5Q96DB9 178 aa13.11□□□□□ -0.31
LTBR-201ENST00000228918 KCNS1Q96KK3 526 aa13.11□□□□□ -0.31
LTBR-201ENST00000228918 VAMP8Q9BV40 100 aa13.11□□□□□ -0.31
LTBR-201ENST00000228918 TPSG1Q9NRR2 321 aa13.11□□□□□ -0.31
LTBR-201ENST00000228918 PAM16Q9Y3D7 125 aa13.11□□□□□ -0.31
LTBR-201ENST00000228918 ZGRF1Q86YA3 2104 aa13.11□□□□□ -0.31
LTBR-201ENST00000228918 SLC25A17O43808 307 aa13.1□□□□□ -0.31
LTBR-201ENST00000228918 BATFQ16520 125 aa13.1□□□□□ -0.31
LTBR-201ENST00000228918 FAM168AQ92567 244 aa13.1□□□□□ -0.31
LTBR-201ENST00000228918 MBD6Q96DN6 1003 aa13.1□□□□□ -0.31
LTBR-201ENST00000228918 RCHY1Q96PM5 261 aa13.1□□□□□ -0.31
LTBR-201ENST00000228918 BSNQ9UPA5 3926 aa13.1□□□□□ -0.31
LTBR-201ENST00000228918 PRRG2O14669 202 aa13.1□□□□□ -0.31
LTBR-201ENST00000228918 TCF21O43680 179 aa13.1□□□□□ -0.31
LTBR-201ENST00000228918 SRIP30626 198 aa13.1□□□□□ -0.31
LTBR-201ENST00000228918 MRGPRG-AS1Q2M3A8 158 aa13.1□□□□□ -0.31
LTBR-201ENST00000228918 VMA21Q3ZAQ7 101 aa13.1□□□□□ -0.31
LTBR-201ENST00000228918 ZNF586Q9NXT0 402 aa13.1□□□□□ -0.31
LTBR-201ENST00000228918 TBL2Q9Y4P3 447 aaKnown RBP13.1□□□□□ -0.31
LTBR-201ENST00000228918 KLK10O43240 276 aa13.09□□□□□ -0.31
LTBR-201ENST00000228918 TFPI2P48307 235 aa13.09□□□□□ -0.31
LTBR-201ENST00000228918 C11orf42Q8N5U0 333 aa13.09□□□□□ -0.31
LTBR-201ENST00000228918 FAM103A1Q9BTL3 118 aaKnown RBP13.09□□□□□ -0.31
LTBR-201ENST00000228918 SSBP3Q9BWW4 388 aaPredicted RBP13.09□□□□□ -0.31
LTBR-201ENST00000228918 PLXNB1O43157 2135 aa13.09□□□□□ -0.31
LTBR-201ENST00000228918 ZNF253O75346 499 aa13.09□□□□□ -0.31
LTBR-201ENST00000228918 REG1AP05451 166 aa13.09□□□□□ -0.31
LTBR-201ENST00000228918 TMEM155Q4W5P6 130 aa13.09□□□□□ -0.31
LTBR-201ENST00000228918 ASPHD1Q5U4P2 390 aa13.09□□□□□ -0.31
LTBR-201ENST00000228918 ASCL5Q7RTU5 278 aa13.09□□□□□ -0.31
LTBR-201ENST00000228918 Q8N976 141 aa13.09□□□□□ -0.31
LTBR-201ENST00000228918 RITA1Q96K30 269 aa13.09□□□□□ -0.31
LTBR-201ENST00000228918 SSUH2Q9Y2M2 353 aa13.09□□□□□ -0.31
LTBR-201ENST00000228918 MAP1BP46821 2468 aaKnown RBP13.08□□□□□ -0.31
LTBR-201ENST00000228918 PKDREJQ9NTG1 2253 aa13.08□□□□□ -0.32
LTBR-201ENST00000228918 TRAV34A0A0B4J273 112 aa13.08□□□□□ -0.32
LTBR-201ENST00000228918 A0A1W2PS18 150 aa13.08□□□□□ -0.32
LTBR-201ENST00000228918 MC5RP33032 325 aa13.08□□□□□ -0.32
LTBR-201ENST00000228918 MYCNOSP40205 109 aa13.08□□□□□ -0.32
LTBR-201ENST00000228918 AMTP48728 403 aa13.08□□□□□ -0.32
LTBR-201ENST00000228918 LINC00305Q7Z4B0 112 aa13.08□□□□□ -0.32
LTBR-201ENST00000228918 WIPF2Q8TF74 440 aaPredicted RBP13.08□□□□□ -0.32
LTBR-201ENST00000228918 JKAMPQ9P055 326 aa13.08□□□□□ -0.32
LTBR-201ENST00000228918 AKAP13Q12802 2813 aa13.08□□□□□ -0.32
LTBR-201ENST00000228918 IGLC7A0M8Q6 106 aa13.08□□□□□ -0.32
LTBR-201ENST00000228918 C22orf46C9J442 243 aa13.08□□□□□ -0.32
LTBR-201ENST00000228918 PLAUP00749 431 aa13.08□□□□□ -0.32
LTBR-201ENST00000228918 APCSP02743 223 aa13.08□□□□□ -0.32
LTBR-201ENST00000228918 RASL11AQ6T310 242 aa13.08□□□□□ -0.32
LTBR-201ENST00000228918 RNASE6Q93091 150 aaKnown RBP13.08□□□□□ -0.32
LTBR-201ENST00000228918 NRN1Q9NPD7 142 aa13.08□□□□□ -0.32
LTBR-201ENST00000228918 ZNF331Q9NQX6 463 aaPredicted RBP13.08□□□□□ -0.32
LTBR-201ENST00000228918 KAAG1Q9UBP8 84 aa13.08□□□□□ -0.32
LTBR-201ENST00000228918 MOSP00540 346 aa13.07□□□□□ -0.32
LTBR-201ENST00000228918 CRYGCP07315 174 aa13.07□□□□□ -0.32
LTBR-201ENST00000228918 IGHV1-8P0DP01 117 aa13.07□□□□□ -0.32
LTBR-201ENST00000228918 KRTDAPP60985 99 aa13.07□□□□□ -0.32
LTBR-201ENST00000228918 SLAQ13239 276 aa13.07□□□□□ -0.32
LTBR-201ENST00000228918 RUSC1-AS1Q66K80 236 aa13.07□□□□□ -0.32
LTBR-201ENST00000228918 PVRIGQ6DKI7 326 aa13.07□□□□□ -0.32
LTBR-201ENST00000228918 GRAMD2BQ96HH9 432 aa13.07□□□□□ -0.32
LTBR-201ENST00000228918 ZNF292O60281 2723 aa13.07□□□□□ -0.32
LTBR-201ENST00000228918 ZNF324O75467 553 aaPredicted RBP13.06□□□□□ -0.32
LTBR-201ENST00000228918 PMCHP20382 165 aa13.06□□□□□ -0.32
LTBR-201ENST00000228918 RBX1P62877 108 aa13.06□□□□□ -0.32
LTBR-201ENST00000228918 NUDT10Q8NFP7 164 aa13.06□□□□□ -0.32
LTBR-201ENST00000228918 NUDT11Q96G61 164 aa13.06□□□□□ -0.32
LTBR-201ENST00000228918 C7orf69Q9H7B7 122 aa13.06□□□□□ -0.32
LTBR-201ENST00000228918 PCNX1Q96RV3 2341 aa13.06□□□□□ -0.32
LTBR-201ENST00000228918 LGALS7P47929 136 aa13.06□□□□□ -0.32
LTBR-201ENST00000228918 GNG5P63218 68 aa13.06□□□□□ -0.32
LTBR-201ENST00000228918 TBR1Q16650 682 aa13.06□□□□□ -0.32
LTBR-201ENST00000228918 ETFRF1Q6IPR1 90 aa13.06□□□□□ -0.32
LTBR-201ENST00000228918 PERPQ96FX8 193 aa13.06□□□□□ -0.32
LTBR-201ENST00000228918 TNFRSF19Q9NS68 423 aa13.06□□□□□ -0.32
LTBR-201ENST00000228918 SH3BGRL2Q9UJC5 107 aa13.06□□□□□ -0.32
LTBR-201ENST00000228918 ANKRD11Q6UB99 2663 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms