RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 TIGITQ495A1 244 aa11.54□□□□□ -0.56
ERCC1-201ENST00000013807 OR1S2Q8NGQ3 325 aa11.54□□□□□ -0.56
ERCC1-201ENST00000013807 NARS2Q96I59 477 aaKnown RBP11.54□□□□□ -0.56
ERCC1-201ENST00000013807 RABAC1Q9UI14 185 aa11.54□□□□□ -0.56
ERCC1-201ENST00000013807 C14orf166Q9Y224 244 aaKnown RBP11.54□□□□□ -0.56
ERCC1-201ENST00000013807 VPS13DQ5THJ4 4388 aa11.53□□□□□ -0.56
ERCC1-201ENST00000013807 HELTA6NFD8 242 aa11.53□□□□□ -0.56
ERCC1-201ENST00000013807 CRYM-AS1A6NIL9 109 aa11.53□□□□□ -0.56
ERCC1-201ENST00000013807 C11orf94C9JXX5 98 aa11.53□□□□□ -0.56
ERCC1-201ENST00000013807 CTDSP2O14595 271 aa11.53□□□□□ -0.56
ERCC1-201ENST00000013807 MIFP14174 115 aa11.53□□□□□ -0.56
ERCC1-201ENST00000013807 ALDH3B2P48448 385 aa11.53□□□□□ -0.56
ERCC1-201ENST00000013807 NMSQ5H8A3 153 aa11.53□□□□□ -0.56
ERCC1-201ENST00000013807 ETFRF1Q6IPR1 90 aa11.53□□□□□ -0.56
ERCC1-201ENST00000013807 C16orf54Q6UWD8 224 aa11.53□□□□□ -0.56
ERCC1-201ENST00000013807 CSNK1G2-AS1Q8NCQ2 148 aa11.53□□□□□ -0.56
ERCC1-201ENST00000013807 STXBP6Q8NFX7 210 aa11.53□□□□□ -0.56
ERCC1-201ENST00000013807 C2CD4CQ8TF44 421 aa11.53□□□□□ -0.56
ERCC1-201ENST00000013807 Q8WTZ3 238 aa11.53□□□□□ -0.56
ERCC1-201ENST00000013807 TMEM170AQ8WVE7 144 aa11.53□□□□□ -0.56
ERCC1-201ENST00000013807 GLMPQ8WWB7 406 aa11.53□□□□□ -0.56
ERCC1-201ENST00000013807 IL22RA2Q969J5 263 aa11.53□□□□□ -0.56
ERCC1-201ENST00000013807 GPR146Q96CH1 333 aa11.53□□□□□ -0.56
ERCC1-201ENST00000013807 HEYLQ9NQ87 328 aaPredicted RBP11.53□□□□□ -0.56
ERCC1-201ENST00000013807 DISC1C4P0D8 188 aa11.52□□□□□ -0.57
ERCC1-201ENST00000013807 RBMY1A1P0DJD3 496 aaKnown RBP11.52□□□□□ -0.57
ERCC1-201ENST00000013807 RBMY1CP0DJD4 496 aa11.52□□□□□ -0.57
ERCC1-201ENST00000013807 EIF2B2P49770 351 aaKnown RBP11.52□□□□□ -0.57
ERCC1-201ENST00000013807 RBMY1FQ15415 496 aaKnown RBP11.52□□□□□ -0.57
ERCC1-201ENST00000013807 NOXA1Q86UR1 476 aa11.52□□□□□ -0.57
ERCC1-201ENST00000013807 SLC24A4Q8NFF2 622 aa11.52□□□□□ -0.57
ERCC1-201ENST00000013807 RNASE11Q8TAA1 199 aaKnown RBP11.52□□□□□ -0.57
ERCC1-201ENST00000013807 CACNG5Q9UF02 275 aa11.52□□□□□ -0.57
ERCC1-201ENST00000013807 HNRNPCP07910 306 aaKnown RBP eCLIP11.51□□□□□ -0.57
ERCC1-201ENST00000013807 AKAIN1P0CW23 69 aa11.51□□□□□ -0.57
ERCC1-201ENST00000013807 OR10J1P30954 320 aa11.51□□□□□ -0.57
ERCC1-201ENST00000013807 FAAP20Q6NZ36 180 aa11.51□□□□□ -0.57
ERCC1-201ENST00000013807 OR4C16Q8NGL9 310 aa11.51□□□□□ -0.57
ERCC1-201ENST00000013807 PRRT1Q99946 306 aa11.51□□□□□ -0.57
ERCC1-201ENST00000013807 FBXL17Q9UF56 701 aa11.51□□□□□ -0.57
ERCC1-201ENST00000013807 APLNQ9ULZ1 77 aa11.51□□□□□ -0.57
ERCC1-201ENST00000013807 X6R8D5 127 aa11.51□□□□□ -0.57
ERCC1-201ENST00000013807 DNAH10Q8IVF4 4471 aa11.5□□□□□ -0.57
ERCC1-201ENST00000013807 DEFB4AO15263 64 aa11.5□□□□□ -0.57
ERCC1-201ENST00000013807 RGS5O15539 181 aa11.5□□□□□ -0.57
ERCC1-201ENST00000013807 BUB3O43684 328 aa11.5□□□□□ -0.57
ERCC1-201ENST00000013807 GSTZ1O43708 216 aaPredicted RBP11.5□□□□□ -0.57
ERCC1-201ENST00000013807 DEDDO75618 318 aa11.5□□□□□ -0.57
ERCC1-201ENST00000013807 NXPH3O95157 252 aa11.5□□□□□ -0.57
ERCC1-201ENST00000013807 ZNF688P0C7X2 276 aa11.5□□□□□ -0.57
ERCC1-201ENST00000013807 C4BPBP20851 252 aa11.5□□□□□ -0.57
ERCC1-201ENST00000013807 RND2P52198 227 aa11.5□□□□□ -0.57
ERCC1-201ENST00000013807 ATP5IP56385 69 aaPredicted RBP11.5□□□□□ -0.57
ERCC1-201ENST00000013807 TMEM268Q5VZI3 342 aa11.5□□□□□ -0.57
ERCC1-201ENST00000013807 RAB40CQ96S21 281 aa11.5□□□□□ -0.57
ERCC1-201ENST00000013807 KCNIP3Q9Y2W7 256 aa11.5□□□□□ -0.57
ERCC1-201ENST00000013807 IGHV4-28A0A0C4DH34 117 aa11.49□□□□□ -0.57
ERCC1-201ENST00000013807 ANKRD20A5PA0PJZ0 165 aa11.49□□□□□ -0.57
ERCC1-201ENST00000013807 TOMM40O96008 361 aa11.49□□□□□ -0.57
ERCC1-201ENST00000013807 NPY1RP25929 384 aa11.49□□□□□ -0.57
ERCC1-201ENST00000013807 SPCS2Q15005 226 aa11.49□□□□□ -0.57
ERCC1-201ENST00000013807 USF2Q15853 346 aaPredicted RBP11.49□□□□□ -0.57
ERCC1-201ENST00000013807 GPR141Q7Z602 305 aa11.49□□□□□ -0.57
ERCC1-201ENST00000013807 BCL7BQ9BQE9 202 aa11.49□□□□□ -0.57
ERCC1-201ENST00000013807 MRPS26Q9BYN8 205 aaKnown RBP11.49□□□□□ -0.57
ERCC1-201ENST00000013807 HSPB7Q9UBY9 170 aa11.49□□□□□ -0.57
ERCC1-201ENST00000013807 U3KQ87 197 aa11.49□□□□□ -0.57
ERCC1-201ENST00000013807 KNCNA6PVL3 124 aa11.48□□□□□ -0.57
ERCC1-201ENST00000013807 CEBPZOSA8MTT3 80 aa11.48□□□□□ -0.57
ERCC1-201ENST00000013807 SULT1A3P0DMM9 295 aa11.48□□□□□ -0.57
ERCC1-201ENST00000013807 SULT1A4P0DMN0 295 aa11.48□□□□□ -0.57
ERCC1-201ENST00000013807 PRR20EP86478 221 aa11.48□□□□□ -0.57
ERCC1-201ENST00000013807 PRR20CP86479 221 aa11.48□□□□□ -0.57
ERCC1-201ENST00000013807 PRR20DP86480 221 aa11.48□□□□□ -0.57
ERCC1-201ENST00000013807 PRR20BP86481 221 aa11.48□□□□□ -0.57
ERCC1-201ENST00000013807 PRR20AP86496 221 aa11.48□□□□□ -0.57
ERCC1-201ENST00000013807 DHRS2Q13268 280 aa11.48□□□□□ -0.57
ERCC1-201ENST00000013807 OR51S1Q8NGJ8 323 aa11.48□□□□□ -0.57
ERCC1-201ENST00000013807 DYNC2LI1Q8TCX1 351 aa11.48□□□□□ -0.57
ERCC1-201ENST00000013807 NPIPB3Q92617 1050 aa11.48□□□□□ -0.57
ERCC1-201ENST00000013807 DIRAS2Q96HU8 199 aa11.48□□□□□ -0.57
ERCC1-201ENST00000013807 SCGB3A2Q96PL1 93 aa11.48□□□□□ -0.57
ERCC1-201ENST00000013807 SOSTQ9BQB4 213 aa11.48□□□□□ -0.57
ERCC1-201ENST00000013807 ELOA3CA0A087WX78 387 aaPredicted RBP11.47□□□□□ -0.57
ERCC1-201ENST00000013807 A0A0B4J2A0 478 aa11.47□□□□□ -0.57
ERCC1-201ENST00000013807 FAM90A26D6RGX4 464 aa11.47□□□□□ -0.57
ERCC1-201ENST00000013807 IL4P05112 153 aa11.47□□□□□ -0.57
ERCC1-201ENST00000013807 RD3LP0DJH9 198 aa11.47□□□□□ -0.57
ERCC1-201ENST00000013807 CCR6P51684 374 aa11.47□□□□□ -0.57
ERCC1-201ENST00000013807 SUPT4H1P63272 117 aaKnown RBP11.47□□□□□ -0.57
ERCC1-201ENST00000013807 ACTL10Q5JWF8 245 aa11.47□□□□□ -0.57
ERCC1-201ENST00000013807 CLVS1Q8IUQ0 354 aaPredicted RBP11.47□□□□□ -0.57
ERCC1-201ENST00000013807 RAB2BQ8WUD1 216 aa11.47□□□□□ -0.57
ERCC1-201ENST00000013807 C1QTNF4Q9BXJ3 329 aa11.47□□□□□ -0.57
ERCC1-201ENST00000013807 NRN1Q9NPD7 142 aa11.47□□□□□ -0.57
ERCC1-201ENST00000013807 CCDC59Q9P031 241 aaKnown RBP11.47□□□□□ -0.57
ERCC1-201ENST00000013807 SHPKQ9UHJ6 478 aa11.47□□□□□ -0.57
ERCC1-201ENST00000013807 SCP2D1Q9UJQ7 156 aa11.47□□□□□ -0.57
ERCC1-201ENST00000013807 TBC1D24Q9ULP9 559 aa11.47□□□□□ -0.57
ERCC1-201ENST00000013807 H3BMM0 161 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms