RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 C8orf88P0DMB2 117 aa8.28□□□□□ -1.08
SPTAN1-228ENST00000635853 KIR3DS1Q14943 382 aa8.28□□□□□ -1.08
SPTAN1-228ENST00000635853 TTC9CQ8N5M4 171 aa8.28□□□□□ -1.08
SPTAN1-228ENST00000635853 C11orf44Q8N8P7 122 aa8.28□□□□□ -1.08
SPTAN1-228ENST00000635853 ARPC1AQ92747 370 aa8.28□□□□□ -1.08
SPTAN1-228ENST00000635853 GAGE12HA6NDE8 117 aa8.28□□□□□ -1.08
SPTAN1-228ENST00000635853 FOXS1O43638 330 aa8.28□□□□□ -1.08
SPTAN1-228ENST00000635853 HSPE1P61604 102 aaKnown RBP8.28□□□□□ -1.08
SPTAN1-228ENST00000635853 ID3Q02535 119 aa8.28□□□□□ -1.08
SPTAN1-228ENST00000635853 FGFRL1Q8N441 504 aa8.28□□□□□ -1.08
SPTAN1-228ENST00000635853 OCC1Q8TAD7 63 aa8.28□□□□□ -1.08
SPTAN1-228ENST00000635853 SAP25Q8TEE9 199 aa8.28□□□□□ -1.08
SPTAN1-228ENST00000635853 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.27□□□□□ -1.08
SPTAN1-228ENST00000635853 TOMM40O96008 361 aa8.27□□□□□ -1.09
SPTAN1-228ENST00000635853 VKORC1L1Q8N0U8 176 aa8.27□□□□□ -1.09
SPTAN1-228ENST00000635853 OR5AN1Q8NGI8 311 aa8.27□□□□□ -1.09
SPTAN1-228ENST00000635853 TMEM167AQ8TBQ9 72 aa8.27□□□□□ -1.09
SPTAN1-228ENST00000635853 RSPO3Q9BXY4 272 aaPredicted RBP8.27□□□□□ -1.09
SPTAN1-228ENST00000635853 TRAV24A0A0B4J272 114 aa8.27□□□□□ -1.09
SPTAN1-228ENST00000635853 RRHO14718 337 aa8.27□□□□□ -1.09
SPTAN1-228ENST00000635853 PEBP1P30086 187 aaKnown RBP8.27□□□□□ -1.09
SPTAN1-228ENST00000635853 ZNF146Q15072 292 aa8.27□□□□□ -1.09
SPTAN1-228ENST00000635853 TSKUQ8WUA8 353 aa8.27□□□□□ -1.09
SPTAN1-228ENST00000635853 SPAG8Q99932 426 aaPredicted RBP8.27□□□□□ -1.09
SPTAN1-228ENST00000635853 PATJQ8NI35 1801 aa8.27□□□□□ -1.09
SPTAN1-228ENST00000635853 A0A1W2PQF6 199 aa8.27□□□□□ -1.09
SPTAN1-228ENST00000635853 COX6A1P12074 109 aa8.27□□□□□ -1.09
SPTAN1-228ENST00000635853 BSPH1Q075Z2 132 aa8.27□□□□□ -1.09
SPTAN1-228ENST00000635853 LINC00305Q7Z4B0 112 aa8.27□□□□□ -1.09
SPTAN1-228ENST00000635853 C19orf24Q9BVV8 132 aa8.27□□□□□ -1.09
SPTAN1-228ENST00000635853 MRPL32Q9BYC8 188 aaKnown RBP8.27□□□□□ -1.09
SPTAN1-228ENST00000635853 CRIM1Q9NZV1 1036 aa8.27□□□□□ -1.09
SPTAN1-228ENST00000635853 FOXA2Q9Y261 457 aaPredicted RBP8.27□□□□□ -1.09
SPTAN1-228ENST00000635853 IGKV1-8A0A0C4DH67 115 aa8.27□□□□□ -1.09
SPTAN1-228ENST00000635853 MYOD1P15172 320 aa8.27□□□□□ -1.09
SPTAN1-228ENST00000635853 TRAV21A0A0B4J279 112 aa8.26□□□□□ -1.09
SPTAN1-228ENST00000635853 SAP30O75446 220 aa8.26□□□□□ -1.09
SPTAN1-228ENST00000635853 IGHV3-48P01763 117 aa8.26□□□□□ -1.09
SPTAN1-228ENST00000635853 SLC22A18ASQ8N1D0 253 aa8.26□□□□□ -1.09
SPTAN1-228ENST00000635853 FDCSPQ8NFU4 85 aa8.26□□□□□ -1.09
SPTAN1-228ENST00000635853 ABHD17AQ96GS6 310 aa8.26□□□□□ -1.09
SPTAN1-228ENST00000635853 hDV102S1A0JD36 115 aa8.26□□□□□ -1.09
SPTAN1-228ENST00000635853 FAM89BQ8N5H3 189 aa8.26□□□□□ -1.09
SPTAN1-228ENST00000635853 PRDM6Q9NQX0 595 aa8.26□□□□□ -1.09
SPTAN1-228ENST00000635853 ZNF319Q9P2F9 582 aa8.26□□□□□ -1.09
SPTAN1-228ENST00000635853 RFNGQ9Y644 331 aa8.26□□□□□ -1.09
SPTAN1-228ENST00000635853 RALGAPA2Q2PPJ7 1873 aa8.26□□□□□ -1.09
SPTAN1-228ENST00000635853 BTAF1O14981 1849 aa8.26□□□□□ -1.09
SPTAN1-228ENST00000635853 C4orf51C9J302 202 aa8.26□□□□□ -1.09
SPTAN1-228ENST00000635853 ZIC3O60481 467 aa8.26□□□□□ -1.09
SPTAN1-228ENST00000635853 ZG16O60844 167 aa8.26□□□□□ -1.09
SPTAN1-228ENST00000635853 APOHP02749 345 aaPredicted RBP8.26□□□□□ -1.09
SPTAN1-228ENST00000635853 GAGE2BQ13066 116 aa8.26□□□□□ -1.09
SPTAN1-228ENST00000635853 GAGE2EQ4V326 116 aa8.26□□□□□ -1.09
SPTAN1-228ENST00000635853 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.26□□□□□ -1.09
SPTAN1-228ENST00000635853 LCN12Q6JVE5 192 aa8.26□□□□□ -1.09
SPTAN1-228ENST00000635853 CTHRC1Q96CG8 243 aa8.26□□□□□ -1.09
SPTAN1-228ENST00000635853 GAGE2DQ9UEU5 116 aa8.26□□□□□ -1.09
SPTAN1-228ENST00000635853 FAM27E3Q08E93 113 aa8.26□□□□□ -1.09
SPTAN1-228ENST00000635853 ZNF479Q96JC4 524 aa8.26□□□□□ -1.09
SPTAN1-228ENST00000635853 SRXN1Q9BYN0 137 aa8.26□□□□□ -1.09
SPTAN1-228ENST00000635853 GP6Q9HCN6 339 aa8.26□□□□□ -1.09
SPTAN1-228ENST00000635853 DPM3Q9P2X0 92 aa8.26□□□□□ -1.09
SPTAN1-228ENST00000635853 LY96Q9Y6Y9 160 aa8.26□□□□□ -1.09
SPTAN1-228ENST00000635853 A0A1B0GUS0 222 aa8.26□□□□□ -1.09
SPTAN1-228ENST00000635853 EFEMP2O95967 443 aa8.26□□□□□ -1.09
SPTAN1-228ENST00000635853 YPEL3P61236 119 aaPredicted RBP8.26□□□□□ -1.09
SPTAN1-228ENST00000635853 ERVK11-1P61568 191 aa8.26□□□□□ -1.09
SPTAN1-228ENST00000635853 TMEM95Q3KNT9 176 aa8.26□□□□□ -1.09
SPTAN1-228ENST00000635853 WDR82Q6UXN9 313 aa8.26□□□□□ -1.09
SPTAN1-228ENST00000635853 TEX45Q8NA69 505 aa8.26□□□□□ -1.09
SPTAN1-228ENST00000635853 NPIPB3Q92617 1050 aa8.26□□□□□ -1.09
SPTAN1-228ENST00000635853 SCGB3A1Q96QR1 104 aa8.26□□□□□ -1.09
SPTAN1-228ENST00000635853 DLL3Q9NYJ7 618 aa8.26□□□□□ -1.09
SPTAN1-228ENST00000635853 NUP214P35658 2090 aaPredicted RBP8.25□□□□□ -1.09
SPTAN1-228ENST00000635853 FAM57AQ8TBR7 257 aa8.25□□□□□ -1.09
SPTAN1-228ENST00000635853 SIGLEC12Q96PQ1 595 aa8.25□□□□□ -1.09
SPTAN1-228ENST00000635853 FBXL15Q9H469 300 aa8.25□□□□□ -1.09
SPTAN1-228ENST00000635853 PLSCR4Q9NRQ2 329 aa8.25□□□□□ -1.09
SPTAN1-228ENST00000635853 NHP2Q9NX24 153 aaKnown RBP8.25□□□□□ -1.09
SPTAN1-228ENST00000635853 NUMA1Q14980 2115 aa8.25□□□□□ -1.09
SPTAN1-228ENST00000635853 BVES-AS1Q5T3Y7 98 aa8.25□□□□□ -1.09
SPTAN1-228ENST00000635853 REPIN1Q9BWE0 567 aaKnown RBP8.25□□□□□ -1.09
SPTAN1-228ENST00000635853 NPIPB4C9JG80 1138 aa8.25□□□□□ -1.09
SPTAN1-228ENST00000635853 NAPSAO96009 420 aa8.25□□□□□ -1.09
SPTAN1-228ENST00000635853 TMEM52Q8NDY8 209 aa8.25□□□□□ -1.09
SPTAN1-228ENST00000635853 GPHA2Q96T91 129 aa8.25□□□□□ -1.09
SPTAN1-228ENST00000635853 FOXA3P55318 350 aaPredicted RBP8.25□□□□□ -1.09
SPTAN1-228ENST00000635853 SYS1-DBNDD2H3BUS1 97 aa8.24□□□□□ -1.09
SPTAN1-228ENST00000635853 IL18BPO95998 194 aa8.24□□□□□ -1.09
SPTAN1-228ENST00000635853 ATP5L2Q7Z4Y8 100 aa8.24□□□□□ -1.09
SPTAN1-228ENST00000635853 LHFPL6Q9Y693 200 aa8.24□□□□□ -1.09
SPTAN1-228ENST00000635853 ZIC4Q8N9L1 334 aa8.24□□□□□ -1.09
SPTAN1-228ENST00000635853 GLMPQ8WWB7 406 aa8.24□□□□□ -1.09
SPTAN1-228ENST00000635853 NAA38Q9BRA0 125 aaKnown RBP8.24□□□□□ -1.09
SPTAN1-228ENST00000635853 OR11H12B2RN74 326 aa8.24□□□□□ -1.09
SPTAN1-228ENST00000635853 PTGDSP41222 190 aa8.24□□□□□ -1.09
SPTAN1-228ENST00000635853 C3orf56Q8N813 242 aa8.24□□□□□ -1.09
SPTAN1-228ENST00000635853 OR11H1Q8NG94 326 aa8.24□□□□□ -1.09
SPTAN1-228ENST00000635853 OR11H2Q8NH07 326 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms