RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 RNASE2P10153 161 aaKnown RBP13.66□□□□□ -0.22
CLN6-210ENST00000635747 TMEM268Q5VZI3 342 aa13.66□□□□□ -0.22
CLN6-210ENST00000635747 Q6ZRM9 215 aa13.66□□□□□ -0.22
CLN6-210ENST00000635747 FAM110AQ9BQ89 295 aa13.66□□□□□ -0.22
CLN6-210ENST00000635747 IGHV3OR16-8A0A075B7F1 116 aa13.65□□□□□ -0.22
CLN6-210ENST00000635747 LOC102724200A0A096LPH7 203 aaPredicted RBP13.65□□□□□ -0.22
CLN6-210ENST00000635747 IGHV7-4-1A0A0J9YVY3 117 aa13.65□□□□□ -0.22
CLN6-210ENST00000635747 ZNF207O43670 478 aaKnown RBP13.65□□□□□ -0.22
CLN6-210ENST00000635747 IGHV3-48P01763 117 aa13.65□□□□□ -0.22
CLN6-210ENST00000635747 HTR2BP41595 481 aa13.65□□□□□ -0.22
CLN6-210ENST00000635747 TMEM116Q8NCL8 245 aa13.65□□□□□ -0.22
CLN6-210ENST00000635747 LHFPL5Q8TAF8 219 aa13.65□□□□□ -0.22
CLN6-210ENST00000635747 DEDD2Q8WXF8 326 aa13.65□□□□□ -0.22
CLN6-210ENST00000635747 GGTLC1Q9BX51 225 aa13.65□□□□□ -0.22
CLN6-210ENST00000635747 CHEK1O14757 476 aa13.64□□□□□ -0.23
CLN6-210ENST00000635747 TMEM50AO95807 157 aa13.64□□□□□ -0.23
CLN6-210ENST00000635747 ANXA3P12429 323 aa13.64□□□□□ -0.23
CLN6-210ENST00000635747 CMC4P56277 68 aaPredicted RBP13.64□□□□□ -0.23
CLN6-210ENST00000635747 PYDC2Q56P42 97 aa13.64□□□□□ -0.23
CLN6-210ENST00000635747 ZNF600Q6ZNG1 722 aa13.64□□□□□ -0.23
CLN6-210ENST00000635747 GPR146Q96CH1 333 aa13.64□□□□□ -0.23
CLN6-210ENST00000635747 RHPN1-AS1Q9BWJ2 59 aa13.64□□□□□ -0.23
CLN6-210ENST00000635747 HEYLQ9NQ87 328 aaPredicted RBP13.64□□□□□ -0.23
CLN6-210ENST00000635747 CACNG5Q9UF02 275 aa13.64□□□□□ -0.23
CLN6-210ENST00000635747 RPS10-NUDT3A0A1W2PQS6 291 aa13.63□□□□□ -0.23
CLN6-210ENST00000635747 OPRK1P41145 380 aa13.63□□□□□ -0.23
CLN6-210ENST00000635747 SRPXP78539 464 aa13.63□□□□□ -0.23
CLN6-210ENST00000635747 TMEM187Q14656 261 aa13.63□□□□□ -0.23
CLN6-210ENST00000635747 BSXQ3C1V8 233 aa13.63□□□□□ -0.23
CLN6-210ENST00000635747 NOXA1Q86UR1 476 aa13.63□□□□□ -0.23
CLN6-210ENST00000635747 TOMM5Q8N4H5 51 aa13.63□□□□□ -0.23
CLN6-210ENST00000635747 IL17DQ8TAD2 202 aa13.63□□□□□ -0.23
CLN6-210ENST00000635747 S100ZQ8WXG8 99 aa13.63□□□□□ -0.23
CLN6-210ENST00000635747 TRAV30A0A087WSZ9 112 aa13.62□□□□□ -0.23
CLN6-210ENST00000635747 CEBPZOSA8MTT3 80 aa13.62□□□□□ -0.23
CLN6-210ENST00000635747 SULT1A3P0DMM9 295 aa13.62□□□□□ -0.23
CLN6-210ENST00000635747 SULT1A4P0DMN0 295 aa13.62□□□□□ -0.23
CLN6-210ENST00000635747 AKR1C4P17516 323 aa13.62□□□□□ -0.23
CLN6-210ENST00000635747 PAFAH1B2P68402 229 aa13.62□□□□□ -0.23
CLN6-210ENST00000635747 ZNF79Q15937 498 aa13.62□□□□□ -0.23
CLN6-210ENST00000635747 TOMM20LQ6UXN7 152 aa13.62□□□□□ -0.23
CLN6-210ENST00000635747 OR4X1Q8NH49 305 aa13.62□□□□□ -0.23
CLN6-210ENST00000635747 TMEM230Q96A57 120 aa13.62□□□□□ -0.23
CLN6-210ENST00000635747 ZNF414Q96IQ9 312 aa13.62□□□□□ -0.23
CLN6-210ENST00000635747 RNF2Q99496 336 aa13.62□□□□□ -0.23
CLN6-210ENST00000635747 A0A0B4J2A0 478 aa13.61□□□□□ -0.23
CLN6-210ENST00000635747 CLN5O75503 358 aa13.61□□□□□ -0.23
CLN6-210ENST00000635747 CCR6P51684 374 aa13.61□□□□□ -0.23
CLN6-210ENST00000635747 APOC4P55056 127 aa13.61□□□□□ -0.23
CLN6-210ENST00000635747 KLF9Q13886 244 aaPredicted RBP13.61□□□□□ -0.23
CLN6-210ENST00000635747 C2orf83Q53S99 150 aa13.61□□□□□ -0.23
CLN6-210ENST00000635747 LGI3Q8N145 548 aa13.61□□□□□ -0.23
CLN6-210ENST00000635747 RNASEH2CQ8TDP1 164 aaKnown RBP13.61□□□□□ -0.23
CLN6-210ENST00000635747 SRRQ9GZT4 340 aa13.61□□□□□ -0.23
CLN6-210ENST00000635747 TMEM231Q9H6L2 316 aa13.61□□□□□ -0.23
CLN6-210ENST00000635747 RETNQ9HD89 108 aa13.61□□□□□ -0.23
CLN6-210ENST00000635747 SHPKQ9UHJ6 478 aa13.61□□□□□ -0.23
CLN6-210ENST00000635747 PUS1Q9Y606 427 aaKnown RBP eCLIP13.61□□□□□ -0.23
CLN6-210ENST00000635747 SLC25A4P12235 298 aa13.6□□□□□ -0.23
CLN6-210ENST00000635747 TRIM63Q969Q1 353 aa13.6□□□□□ -0.23
CLN6-210ENST00000635747 FNDC4Q9H6D8 234 aaPredicted RBP13.6□□□□□ -0.23
CLN6-210ENST00000635747 A0A1W2PS18 150 aa13.59□□□□□ -0.23
CLN6-210ENST00000635747 UBE2CO00762 179 aa13.59□□□□□ -0.23
CLN6-210ENST00000635747 SMCO1Q147U7 214 aa13.59□□□□□ -0.23
CLN6-210ENST00000635747 TMEM128Q5BJH2 165 aa13.59□□□□□ -0.23
CLN6-210ENST00000635747 NMSQ5H8A3 153 aa13.59□□□□□ -0.23
CLN6-210ENST00000635747 ETFRF1Q6IPR1 90 aa13.59□□□□□ -0.23
CLN6-210ENST00000635747 SLC24A4Q8NFF2 622 aa13.59□□□□□ -0.23
CLN6-210ENST00000635747 SLC25A21Q9BQT8 299 aaPredicted RBP13.59□□□□□ -0.23
CLN6-210ENST00000635747 VSIRQ9H7M9 311 aa13.59□□□□□ -0.23
CLN6-210ENST00000635747 UBQLN2Q9UHD9 624 aa13.59□□□□□ -0.23
CLN6-210ENST00000635747 IGHV3-49A0A0A0MS15 119 aa13.58□□□□□ -0.24
CLN6-210ENST00000635747 KIR2DL5BA0A0G2JN68 375 aa13.58□□□□□ -0.24
CLN6-210ENST00000635747 KIR2DL5BA0A0G2JPC4 375 aa13.58□□□□□ -0.24
CLN6-210ENST00000635747 DUXBA0A1W2PPF3 345 aa13.58□□□□□ -0.24
CLN6-210ENST00000635747 NPPCP23582 126 aa13.58□□□□□ -0.24
CLN6-210ENST00000635747 SUPT4H1P63272 117 aaKnown RBP13.58□□□□□ -0.24
CLN6-210ENST00000635747 MLANAQ16655 118 aa13.58□□□□□ -0.24
CLN6-210ENST00000635747 ODF3L2Q3SX64 289 aa13.58□□□□□ -0.24
CLN6-210ENST00000635747 FAM90A2PQ658T7 463 aa13.58□□□□□ -0.24
CLN6-210ENST00000635747 Q6ZWC4 215 aa13.58□□□□□ -0.24
CLN6-210ENST00000635747 TCF24Q7RTU0 167 aa13.58□□□□□ -0.24
CLN6-210ENST00000635747 KIR2DL5AQ8N109 375 aa13.58□□□□□ -0.24
CLN6-210ENST00000635747 KIR2DL5BQ8NHK3 375 aa13.58□□□□□ -0.24
CLN6-210ENST00000635747 NARS2Q96I59 477 aaKnown RBP13.58□□□□□ -0.24
CLN6-210ENST00000635747 WDR12Q9GZL7 423 aaKnown RBP13.58□□□□□ -0.24
CLN6-210ENST00000635747 ZFAND3Q9H8U3 227 aa13.58□□□□□ -0.24
CLN6-210ENST00000635747 TP53TG1Q9Y2A0 90 aa13.58□□□□□ -0.24
CLN6-210ENST00000635747 U3KQ87 197 aa13.58□□□□□ -0.24
CLN6-210ENST00000635747 RYR3Q15413 4870 aa13.57□□□□□ -0.24
CLN6-210ENST00000635747 NPY1RP25929 384 aa13.57□□□□□ -0.24
CLN6-210ENST00000635747 ATP5IP56385 69 aaPredicted RBP13.57□□□□□ -0.24
CLN6-210ENST00000635747 TNFRSF9Q07011 255 aa13.57□□□□□ -0.24
CLN6-210ENST00000635747 ZFAND6Q6FIF0 208 aa13.57□□□□□ -0.24
CLN6-210ENST00000635747 LYZL2Q7Z4W2 148 aa13.57□□□□□ -0.24
CLN6-210ENST00000635747 METTL26Q96S19 204 aa13.57□□□□□ -0.24
CLN6-210ENST00000635747 HSPB7Q9UBY9 170 aa13.57□□□□□ -0.24
CLN6-210ENST00000635747 IGHV3OR16-13A0A075B7E8 117 aa13.56□□□□□ -0.24
CLN6-210ENST00000635747 IGHV3-74A0A0B4J1X5 117 aa13.56□□□□□ -0.24
CLN6-210ENST00000635747 A0A1B0GU03 582 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms