RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, human

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42BPB-209	ENST00000634889	ZNF320	A2RRD8	509 aa		11.22	□□□□□ -0.61
CDC42BPB-209	ENST00000634889	C2orf70	A6NJV1	201 aa		11.22	□□□□□ -0.61
CDC42BPB-209	ENST00000634889	SYNGR2	O43760	224 aa		11.22	□□□□□ -0.61
CDC42BPB-209	ENST00000634889	SCGB2A1	O75556	95 aa		11.22	□□□□□ -0.61
CDC42BPB-209	ENST00000634889	PRB2	P02812	416 aa	Predicted RBP	11.22	□□□□□ -0.61
CDC42BPB-209	ENST00000634889	SLC25A4	P12235	298 aa		11.22	□□□□□ -0.61
CDC42BPB-209	ENST00000634889	ADM	P35318	185 aa		11.22	□□□□□ -0.61
CDC42BPB-209	ENST00000634889	ELL	P55199	621 aa	Predicted RBP	11.22	□□□□□ -0.61
CDC42BPB-209	ENST00000634889	ID3	Q02535	119 aa		11.22	□□□□□ -0.61
CDC42BPB-209	ENST00000634889	ETFRF1	Q6IPR1	90 aa		11.22	□□□□□ -0.61
CDC42BPB-209	ENST00000634889	OR4D5	Q8NGN0	318 aa		11.22	□□□□□ -0.61
CDC42BPB-209	ENST00000634889	OR4X1	Q8NH49	305 aa		11.22	□□□□□ -0.61
CDC42BPB-209	ENST00000634889	TMEM170A	Q8WVE7	144 aa		11.22	□□□□□ -0.61
CDC42BPB-209	ENST00000634889	CHRDL1	Q9BU40	450 aa		11.22	□□□□□ -0.61
CDC42BPB-209	ENST00000634889	FNDC4	Q9H6D8	234 aa	Predicted RBP	11.22	□□□□□ -0.61
CDC42BPB-209	ENST00000634889	ZNF256	Q9Y2P7	627 aa	Predicted RBP	11.22	□□□□□ -0.61
CDC42BPB-209	ENST00000634889	UFC1	Q9Y3C8	167 aa		11.22	□□□□□ -0.61
CDC42BPB-209	ENST00000634889	PRAF2	O60831	178 aa		11.21	□□□□□ -0.61
CDC42BPB-209	ENST00000634889	IGHV3-48	P01763	117 aa		11.21	□□□□□ -0.61
CDC42BPB-209	ENST00000634889	NKX2-1	P43699	371 aa	Predicted RBP	11.21	□□□□□ -0.61
CDC42BPB-209	ENST00000634889	RPP30	P78346	268 aa	Known RBP	11.21	□□□□□ -0.61
CDC42BPB-209	ENST00000634889	IAH1	Q2TAA2	248 aa	Predicted RBP	11.21	□□□□□ -0.61
CDC42BPB-209	ENST00000634889	C11orf87	Q6NUJ2	197 aa		11.21	□□□□□ -0.61
CDC42BPB-209	ENST00000634889	UNQ9165/PRO28630	Q6UXU0	137 aa		11.21	□□□□□ -0.61
CDC42BPB-209	ENST00000634889	C12orf45	Q8N5I9	185 aa	Predicted RBP	11.21	□□□□□ -0.61
CDC42BPB-209	ENST00000634889	OR2K2	Q8NGT1	345 aa		11.21	□□□□□ -0.61
CDC42BPB-209	ENST00000634889	TMEM190	Q8WZ59	177 aa		11.21	□□□□□ -0.61
CDC42BPB-209	ENST00000634889	MARC2	Q969Z3	335 aa		11.21	□□□□□ -0.61
CDC42BPB-209	ENST00000634889	MARVELD1	Q9BSK0	173 aa		11.21	□□□□□ -0.61
CDC42BPB-209	ENST00000634889	GPN1	Q9HCN4	374 aa	Predicted RBP	11.21	□□□□□ -0.61
CDC42BPB-209	ENST00000634889	IGHV3-35	A0A0C4DH35	117 aa		11.2	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	TMEM213	A2RRL7	107 aa		11.2	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	CLN5	O75503	358 aa		11.2	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	IAPP	P10997	89 aa		11.2	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	FOLR2	P14207	255 aa		11.2	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	CBLN1	P23435	193 aa		11.2	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	LCN12	Q6JVE5	192 aa		11.2	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	TMEM116	Q8NCL8	245 aa		11.2	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	OR10C1	Q96KK4	312 aa		11.2	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	DAZ1	Q9NQZ3	744 aa	Known RBP	11.2	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	TECR	Q9NZ01	308 aa	Known RBP	11.2	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	TRAV30	A0A087WSZ9	112 aa		11.19	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	WI2-2373I1.2	A0A1W2PRP0	233 aa		11.19	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	C15orf62	A8K5M9	175 aa		11.19	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	SNRPGP15	A8MWD9	76 aa		11.19	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	INMT-MINDY4	F8WBC2	141 aa		11.19	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	WRB	O00258	174 aa		11.19	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	TMEM50A	O95807	157 aa		11.19	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	IFNA4	P05014	189 aa		11.19	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	SPN	P16150	400 aa		11.19	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	RAB11A	P62491	216 aa		11.19	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	DCTN2	Q13561	401 aa	Known RBP	11.19	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	ADAMTSL5	Q6ZMM2	481 aa		11.19	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	11.19	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	UXS1	Q8NBZ7	420 aa		11.19	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	MRAP	Q8TCY5	172 aa		11.19	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	DYNLRB2	Q8TF09	96 aa		11.19	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	MAGT1	Q9H0U3	335 aa		11.19	□□□□□ -0.62
CDC42BPB-209	ENST00000634889		K7EIL1	84 aa		11.18	□□□□□ -0.62
CDC42BPB-209	ENST00000634889		K7EMT4	169 aa		11.18	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	C8orf88	P0DMB2	117 aa		11.18	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	GP9	P14770	177 aa		11.18	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	POLR2G	P62487	172 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	CD69	Q07108	199 aa		11.18	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	MLANA	Q16655	118 aa		11.18	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	PRSS54	Q6PEW0	395 aa		11.18	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	ZNF600	Q6ZNG1	722 aa		11.18	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	SLC16A13	Q7RTY0	426 aa		11.18	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	HAPLN4	Q86UW8	402 aa		11.18	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	CACNG8	Q8WXS5	425 aa		11.18	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	ZNF414	Q96IQ9	312 aa		11.18	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	MRPL36	Q9P0J6	103 aa	Known RBP	11.18	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	MRPL27	Q9P0M9	148 aa	Known RBP	11.18	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	DNAH3	Q8TD57	4116 aa		11.18	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	CCS	O14618	274 aa		11.17	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	PTTG1	O95997	202 aa		11.17	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	GPX4	P36969	197 aa	Predicted RBP	11.17	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	RND2	P52198	227 aa		11.17	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	DEFB114	Q30KQ6	69 aa		11.17	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	TM4SF20	Q53R12	229 aa		11.17	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	C2orf50	Q96LR7	162 aa		11.17	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	PRR25	Q96S07	402 aa		11.17	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	RAB40C	Q96S21	281 aa		11.17	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	C20orf24	Q9BUV8	137 aa		11.17	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	GSKIP	Q9P0R6	139 aa		11.17	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	C5orf51	A6NDU8	294 aa		11.16	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	FAM25E	A8MYX2	175 aa		11.16	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	SSSCA1	O60232	199 aa		11.16	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	YIF1A	O95070	293 aa		11.16	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	SCGB1D2	O95969	90 aa		11.16	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	IGLC1	P0CG04	106 aa		11.16	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	EDN2	P20800	178 aa		11.16	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	TAS2R30	P59541	319 aa		11.16	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	CD300E	Q496F6	205 aa	Predicted RBP	11.16	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	SPANXN5	Q5MJ07	72 aa		11.16	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	GSG1L	Q6UXU4	331 aa		11.16	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	OR1S2	Q8NGQ3	325 aa		11.16	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	SMIM8	Q96KF7	97 aa		11.16	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	GINS3	Q9BRX5	216 aa		11.16	□□□□□ -0.62
CDC42BPB-209	ENST00000634889	MLX	Q9UH92	298 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms