RNA–Protein interactions for RNA: ENST00000628606.1

CHRNA4-211, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 183 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-211ENST00000628606 LINC00322Q6ZN03 302 aaPredicted RBP11.92□□□□□ -0.5
CHRNA4-211ENST00000628606 HIPK2Q9H2X6 1198 aa11.92□□□□□ -0.5
CHRNA4-211ENST00000628606 SMPXQ9UHP9 88 aa11.92□□□□□ -0.5
CHRNA4-211ENST00000628606 LOC102724200A0A096LPH7 203 aaPredicted RBP11.91□□□□□ -0.5
CHRNA4-211ENST00000628606 IGHV7-4-1A0A0J9YVY3 117 aa11.91□□□□□ -0.5
CHRNA4-211ENST00000628606 ZNF701M0R085 212 aaPredicted RBP11.91□□□□□ -0.5
CHRNA4-211ENST00000628606 TMEM187Q14656 261 aa11.91□□□□□ -0.5
CHRNA4-211ENST00000628606 AARDQ4LEZ3 155 aa11.91□□□□□ -0.5
CHRNA4-211ENST00000628606 ZNF600Q6ZNG1 722 aa11.91□□□□□ -0.5
CHRNA4-211ENST00000628606 NOXA1Q86UR1 476 aa11.91□□□□□ -0.5
CHRNA4-211ENST00000628606 DEDD2Q8WXF8 326 aa11.91□□□□□ -0.5
CHRNA4-211ENST00000628606 OR10C1Q96KK4 312 aa11.91□□□□□ -0.5
CHRNA4-211ENST00000628606 RHPN1-AS1Q9BWJ2 59 aa11.91□□□□□ -0.5
CHRNA4-211ENST00000628606 HUWE1Q7Z6Z7 4374 aaKnown RBP11.9□□□□□ -0.5
CHRNA4-211ENST00000628606 CHEK1O14757 476 aa11.9□□□□□ -0.5
CHRNA4-211ENST00000628606 TMEM50AO95807 157 aa11.9□□□□□ -0.5
CHRNA4-211ENST00000628606 CD5P06127 495 aa11.9□□□□□ -0.5
CHRNA4-211ENST00000628606 INPP1P49441 399 aa11.9□□□□□ -0.5
CHRNA4-211ENST00000628606 KLF9Q13886 244 aaPredicted RBP11.9□□□□□ -0.5
CHRNA4-211ENST00000628606 TMED4Q7Z7H5 227 aa11.9□□□□□ -0.5
CHRNA4-211ENST00000628606 LGI3Q8N145 548 aa11.9□□□□□ -0.5
CHRNA4-211ENST00000628606 TMEM230Q96A57 120 aa11.9□□□□□ -0.5
CHRNA4-211ENST00000628606 GGTLC1Q9BX51 225 aa11.9□□□□□ -0.5
CHRNA4-211ENST00000628606 TRAV30A0A087WSZ9 112 aa11.89□□□□□ -0.51
CHRNA4-211ENST00000628606 IGHV3-49A0A0A0MS15 119 aa11.89□□□□□ -0.51
CHRNA4-211ENST00000628606 A0A0B4J2A0 478 aa11.89□□□□□ -0.51
CHRNA4-211ENST00000628606 CLN5O75503 358 aa11.89□□□□□ -0.51
CHRNA4-211ENST00000628606 CCR6P51684 374 aa11.89□□□□□ -0.51
CHRNA4-211ENST00000628606 CMC4P56277 68 aaPredicted RBP11.89□□□□□ -0.51
CHRNA4-211ENST00000628606 PAFAH1B2P68402 229 aa11.89□□□□□ -0.51
CHRNA4-211ENST00000628606 PVRIGQ6DKI7 326 aa11.89□□□□□ -0.51
CHRNA4-211ENST00000628606 TOMM20LQ6UXN7 152 aa11.89□□□□□ -0.51
CHRNA4-211ENST00000628606 OR4X1Q8NH49 305 aa11.89□□□□□ -0.51
CHRNA4-211ENST00000628606 TRIM63Q969Q1 353 aa11.89□□□□□ -0.51
CHRNA4-211ENST00000628606 RNF2Q99496 336 aa11.89□□□□□ -0.51
CHRNA4-211ENST00000628606 SLC25A21Q9BQT8 299 aaPredicted RBP11.89□□□□□ -0.51
CHRNA4-211ENST00000628606 UBQLN2Q9UHD9 624 aa11.89□□□□□ -0.51
CHRNA4-211ENST00000628606 SHPKQ9UHJ6 478 aa11.89□□□□□ -0.51
CHRNA4-211ENST00000628606 PUS1Q9Y606 427 aaKnown RBP eCLIP11.89□□□□□ -0.51
CHRNA4-211ENST00000628606 V9GYH0 126 aa11.89□□□□□ -0.51
CHRNA4-211ENST00000628606 NXPH3O95157 252 aa11.88□□□□□ -0.51
CHRNA4-211ENST00000628606 SMCO1Q147U7 214 aa11.88□□□□□ -0.51
CHRNA4-211ENST00000628606 BSXQ3C1V8 233 aa11.88□□□□□ -0.51
CHRNA4-211ENST00000628606 C2orf83Q53S99 150 aa11.88□□□□□ -0.51
CHRNA4-211ENST00000628606 TMEM128Q5BJH2 165 aa11.88□□□□□ -0.51
CHRNA4-211ENST00000628606 CASC10Q5T4H9 136 aa11.88□□□□□ -0.51
CHRNA4-211ENST00000628606 ETFRF1Q6IPR1 90 aa11.88□□□□□ -0.51
CHRNA4-211ENST00000628606 CCDC190Q86UF4 302 aa11.88□□□□□ -0.51
CHRNA4-211ENST00000628606 SLC24A4Q8NFF2 622 aa11.88□□□□□ -0.51
CHRNA4-211ENST00000628606 RNASEH2CQ8TDP1 164 aaKnown RBP11.88□□□□□ -0.51
CHRNA4-211ENST00000628606 NARS2Q96I59 477 aaKnown RBP11.88□□□□□ -0.51
CHRNA4-211ENST00000628606 RBM38Q9H0Z9 239 aaKnown RBP11.88□□□□□ -0.51
CHRNA4-211ENST00000628606 FNDC4Q9H6D8 234 aaPredicted RBP11.88□□□□□ -0.51
CHRNA4-211ENST00000628606 TMEM231Q9H6L2 316 aa11.88□□□□□ -0.51
CHRNA4-211ENST00000628606 RETNQ9HD89 108 aa11.88□□□□□ -0.51
CHRNA4-211ENST00000628606 PRR13Q9NZ81 148 aa11.88□□□□□ -0.51
CHRNA4-211ENST00000628606 IGKV3-7A0A075B6H7 116 aa11.87□□□□□ -0.51
CHRNA4-211ENST00000628606 IGHV3OR16-13A0A075B7E8 117 aa11.87□□□□□ -0.51
CHRNA4-211ENST00000628606 IGHV3-74A0A0B4J1X5 117 aa11.87□□□□□ -0.51
CHRNA4-211ENST00000628606 A0A1W2PS18 150 aa11.87□□□□□ -0.51
CHRNA4-211ENST00000628606 IFNA10P01566 189 aa11.87□□□□□ -0.51
CHRNA4-211ENST00000628606 SLC25A4P12235 298 aa11.87□□□□□ -0.51
CHRNA4-211ENST00000628606 NPPCP23582 126 aa11.87□□□□□ -0.51
CHRNA4-211ENST00000628606 VAMP1P23763 118 aa11.87□□□□□ -0.51
CHRNA4-211ENST00000628606 APOC4P55056 127 aa11.87□□□□□ -0.51
CHRNA4-211ENST00000628606 SUPT4H1P63272 117 aaKnown RBP11.87□□□□□ -0.51
CHRNA4-211ENST00000628606 ZNF79Q15937 498 aa11.87□□□□□ -0.51
CHRNA4-211ENST00000628606 MLANAQ16655 118 aa11.87□□□□□ -0.51
CHRNA4-211ENST00000628606 LYZL2Q7Z4W2 148 aa11.87□□□□□ -0.51
CHRNA4-211ENST00000628606 OR1S1Q8NH92 325 aa11.87□□□□□ -0.51
CHRNA4-211ENST00000628606 FAM110AQ9BQ89 295 aa11.87□□□□□ -0.51
CHRNA4-211ENST00000628606 EDA2RQ9HAV5 297 aa11.87□□□□□ -0.51
CHRNA4-211ENST00000628606 U3KQ87 197 aa11.87□□□□□ -0.51
CHRNA4-211ENST00000628606 DUXBA0A1W2PPF3 345 aa11.86□□□□□ -0.51
CHRNA4-211ENST00000628606 DNASE2O00115 360 aaPredicted RBP11.86□□□□□ -0.51
CHRNA4-211ENST00000628606 NPY1RP25929 384 aa11.86□□□□□ -0.51
CHRNA4-211ENST00000628606 TFPI2P48307 235 aa11.86□□□□□ -0.51
CHRNA4-211ENST00000628606 RPL11P62913 178 aaKnown RBP11.86□□□□□ -0.51
CHRNA4-211ENST00000628606 TNFRSF9Q07011 255 aa11.86□□□□□ -0.51
CHRNA4-211ENST00000628606 TRIQKQ629K1 86 aa11.86□□□□□ -0.51
CHRNA4-211ENST00000628606 TCF24Q7RTU0 167 aa11.86□□□□□ -0.51
CHRNA4-211ENST00000628606 IL17DQ8TAD2 202 aa11.86□□□□□ -0.51
CHRNA4-211ENST00000628606 METTL26Q96S19 204 aa11.86□□□□□ -0.51
CHRNA4-211ENST00000628606 A0A1B0GU03 582 aa11.85□□□□□ -0.51
CHRNA4-211ENST00000628606 NMSQ5H8A3 153 aa11.85□□□□□ -0.51
CHRNA4-211ENST00000628606 ZFAND6Q6FIF0 208 aa11.85□□□□□ -0.51
CHRNA4-211ENST00000628606 GBGT1Q8N5D6 347 aa11.85□□□□□ -0.51
CHRNA4-211ENST00000628606 OR1S2Q8NGQ3 325 aa11.85□□□□□ -0.51
CHRNA4-211ENST00000628606 DTD1Q8TEA8 209 aa11.85□□□□□ -0.51
CHRNA4-211ENST00000628606 DNAH7Q8WXX0 4024 aa11.84□□□□□ -0.51
CHRNA4-211ENST00000628606 RND2P52198 227 aa11.84□□□□□ -0.51
CHRNA4-211ENST00000628606 RBMS2Q15434 407 aaKnown RBP11.84□□□□□ -0.51
CHRNA4-211ENST00000628606 ODF3L2Q3SX64 289 aa11.84□□□□□ -0.51
CHRNA4-211ENST00000628606 TIGITQ495A1 244 aa11.84□□□□□ -0.51
CHRNA4-211ENST00000628606 PRSS54Q6PEW0 395 aa11.84□□□□□ -0.51
CHRNA4-211ENST00000628606 CENPSQ8N2Z9 138 aa11.84□□□□□ -0.51
CHRNA4-211ENST00000628606 STPG3Q8N7X2 389 aa11.84□□□□□ -0.51
CHRNA4-211ENST00000628606 Q8WTZ3 238 aa11.84□□□□□ -0.51
CHRNA4-211ENST00000628606 ST8SIA2Q92186 375 aa11.84□□□□□ -0.51
CHRNA4-211ENST00000628606 ZNF414Q96IQ9 312 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms