RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 SPCS2Q15005 226 aa17.72■□□□□ 0.43
ATXN3-253ENST00000621269 ZNF124Q15973 351 aa17.72■□□□□ 0.43
ATXN3-253ENST00000621269 FAAP20Q6NZ36 180 aa17.72■□□□□ 0.43
ATXN3-253ENST00000621269 FAM219AQ8IW50 185 aa17.72■□□□□ 0.43
ATXN3-253ENST00000621269 TMEM217Q8N7C4 229 aa17.72■□□□□ 0.43
ATXN3-253ENST00000621269 VSIRQ9H7M9 311 aa17.72■□□□□ 0.43
ATXN3-253ENST00000621269 NUPR2A6NF83 97 aa17.71■□□□□ 0.43
ATXN3-253ENST00000621269 CDS2O95674 445 aa17.71■□□□□ 0.43
ATXN3-253ENST00000621269 APOHP02749 345 aaPredicted RBP17.71■□□□□ 0.43
ATXN3-253ENST00000621269 OR5AC1P0C628 307 aa17.71■□□□□ 0.43
ATXN3-253ENST00000621269 SPCS3P61009 180 aa17.71■□□□□ 0.43
ATXN3-253ENST00000621269 SURF2Q15527 256 aaPredicted RBP17.71■□□□□ 0.43
ATXN3-253ENST00000621269 SMIM4Q8WVI0 70 aa17.71■□□□□ 0.43
ATXN3-253ENST00000621269 RTBDNQ9BSG5 229 aaPredicted RBP17.71■□□□□ 0.43
ATXN3-253ENST00000621269 TMEM231Q9H6L2 316 aa17.71■□□□□ 0.43
ATXN3-253ENST00000621269 ZFAND3Q9H8U3 227 aa17.71■□□□□ 0.43
ATXN3-253ENST00000621269 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.71■□□□□ 0.43
ATXN3-253ENST00000621269 DNAH1Q9P2D7 4330 aa17.71■□□□□ 0.42
ATXN3-253ENST00000621269 IGHV3-66A0A0C4DH42 116 aa17.7■□□□□ 0.42
ATXN3-253ENST00000621269 A0A1B0GU03 582 aa17.7■□□□□ 0.42
ATXN3-253ENST00000621269 MPTX1A8MV57 137 aa17.7■□□□□ 0.42
ATXN3-253ENST00000621269 NPPCP23582 126 aa17.7■□□□□ 0.42
ATXN3-253ENST00000621269 EWSR1Q01844 656 aaKnown RBP eCLIP17.7■□□□□ 0.42
ATXN3-253ENST00000621269 DHODHQ02127 395 aa17.7■□□□□ 0.42
ATXN3-253ENST00000621269 IL18Q14116 193 aa17.7■□□□□ 0.42
ATXN3-253ENST00000621269 Q6ZRM9 215 aa17.7■□□□□ 0.42
ATXN3-253ENST00000621269 DIRAS2Q96HU8 199 aa17.7■□□□□ 0.42
ATXN3-253ENST00000621269 MS4A6AQ9H2W1 248 aa17.7■□□□□ 0.42
ATXN3-253ENST00000621269 NAA60Q9H7X0 242 aa17.7■□□□□ 0.42
ATXN3-253ENST00000621269 RABL2AQ9UBK7 228 aaPredicted RBP17.7■□□□□ 0.42
ATXN3-253ENST00000621269 RABL2BQ9UNT1 228 aa17.7■□□□□ 0.42
ATXN3-253ENST00000621269 CLN5O75503 358 aa17.69■□□□□ 0.42
ATXN3-253ENST00000621269 DFFBO76075 338 aa17.69■□□□□ 0.42
ATXN3-253ENST00000621269 AKAIN1P0CW23 69 aa17.69■□□□□ 0.42
ATXN3-253ENST00000621269 ATF4P18848 351 aaPredicted RBP17.69■□□□□ 0.42
ATXN3-253ENST00000621269 RPL5P46777 297 aaKnown RBP17.69■□□□□ 0.42
ATXN3-253ENST00000621269 CLVS1Q8IUQ0 354 aaPredicted RBP17.69■□□□□ 0.42
ATXN3-253ENST00000621269 OR4X1Q8NH49 305 aa17.69■□□□□ 0.42
ATXN3-253ENST00000621269 OR52E5Q8NH55 327 aa17.69■□□□□ 0.42
ATXN3-253ENST00000621269 GLYATL2Q8WU03 294 aa17.69■□□□□ 0.42
ATXN3-253ENST00000621269 RBPMSQ93062 196 aaKnown RBP17.69■□□□□ 0.42
ATXN3-253ENST00000621269 A0A1W2PS18 150 aa17.68■□□□□ 0.42
ATXN3-253ENST00000621269 HTR2BP41595 481 aa17.68■□□□□ 0.42
ATXN3-253ENST00000621269 MLANAQ16655 118 aa17.68■□□□□ 0.42
ATXN3-253ENST00000621269 LILRB2Q8N423 598 aa17.68■□□□□ 0.42
ATXN3-253ENST00000621269 GATAD1Q8WUU5 269 aa17.68■□□□□ 0.42
ATXN3-253ENST00000621269 TMEM230Q96A57 120 aa17.68■□□□□ 0.42
ATXN3-253ENST00000621269 FNDC4Q9H6D8 234 aaPredicted RBP17.68■□□□□ 0.42
ATXN3-253ENST00000621269 HEYLQ9NQ87 328 aaPredicted RBP17.68■□□□□ 0.42
ATXN3-253ENST00000621269 RPS10-NUDT3A0A1W2PQS6 291 aa17.67■□□□□ 0.42
ATXN3-253ENST00000621269 CTDSPLO15194 276 aa17.67■□□□□ 0.42
ATXN3-253ENST00000621269 BSXQ3C1V8 233 aa17.67■□□□□ 0.42
ATXN3-253ENST00000621269 AARDQ4LEZ3 155 aa17.67■□□□□ 0.42
ATXN3-253ENST00000621269 CEMP1Q6PRD7 247 aaPredicted RBP17.67■□□□□ 0.42
ATXN3-253ENST00000621269 SELENOHQ8IZQ5 122 aaKnown RBP17.67■□□□□ 0.42
ATXN3-253ENST00000621269 OR4C16Q8NGL9 310 aa17.67■□□□□ 0.42
ATXN3-253ENST00000621269 LHFPL5Q8TAF8 219 aa17.67■□□□□ 0.42
ATXN3-253ENST00000621269 RAB2BQ8WUD1 216 aa17.67■□□□□ 0.42
ATXN3-253ENST00000621269 METTL26Q96S19 204 aa17.67■□□□□ 0.42
ATXN3-253ENST00000621269 PRRT1Q99946 306 aa17.67■□□□□ 0.42
ATXN3-253ENST00000621269 MRPL36Q9P0J6 103 aaKnown RBP17.67■□□□□ 0.42
ATXN3-253ENST00000621269 GPR132Q9UNW8 380 aa17.67■□□□□ 0.42
ATXN3-253ENST00000621269 TRAV30A0A087WSZ9 112 aa17.66■□□□□ 0.42
ATXN3-253ENST00000621269 TRAV2A0A0B4J234 112 aa17.66■□□□□ 0.42
ATXN3-253ENST00000621269 TMEM268Q5VZI3 342 aa17.66■□□□□ 0.42
ATXN3-253ENST00000621269 NARS2Q96I59 477 aaKnown RBP17.66■□□□□ 0.42
ATXN3-253ENST00000621269 RARRES2Q99969 163 aa17.66■□□□□ 0.42
ATXN3-253ENST00000621269 CCDC59Q9P031 241 aaKnown RBP17.66■□□□□ 0.42
ATXN3-253ENST00000621269 CACNG5Q9UF02 275 aa17.66■□□□□ 0.42
ATXN3-253ENST00000621269 RABAC1Q9UI14 185 aa17.66■□□□□ 0.42
ATXN3-253ENST00000621269 CRYM-AS1A6NIL9 109 aa17.65■□□□□ 0.42
ATXN3-253ENST00000621269 CEBPZOSA8MTT3 80 aa17.65■□□□□ 0.42
ATXN3-253ENST00000621269 DEFB131AP59861 70 aa17.65■□□□□ 0.42
ATXN3-253ENST00000621269 OR51S1Q8NGJ8 323 aa17.65■□□□□ 0.42
ATXN3-253ENST00000621269 LINC00476Q8WZB0 136 aa17.65■□□□□ 0.42
ATXN3-253ENST00000621269 GPR146Q96CH1 333 aa17.65■□□□□ 0.42
ATXN3-253ENST00000621269 KLK5Q9Y337 293 aaPredicted RBP17.65■□□□□ 0.42
ATXN3-253ENST00000621269 HYDINQ4G0P3 5121 aa17.64■□□□□ 0.41
ATXN3-253ENST00000621269 LY6G6CO95867 125 aa17.64■□□□□ 0.41
ATXN3-253ENST00000621269 TMBIM6P55061 237 aa17.64■□□□□ 0.41
ATXN3-253ENST00000621269 TIGITQ495A1 244 aa17.64■□□□□ 0.41
ATXN3-253ENST00000621269 LEMD1Q68G75 181 aa17.64■□□□□ 0.41
ATXN3-253ENST00000621269 DYNC2LI1Q8TCX1 351 aa17.64■□□□□ 0.41
ATXN3-253ENST00000621269 KCNIP3Q9Y2W7 256 aa17.64■□□□□ 0.41
ATXN3-253ENST00000621269 CRYBB3P26998 211 aa17.63■□□□□ 0.41
ATXN3-253ENST00000621269 C2orf83Q53S99 150 aa17.63■□□□□ 0.41
ATXN3-253ENST00000621269 RNASEH2CQ8TDP1 164 aaKnown RBP17.63■□□□□ 0.41
ATXN3-253ENST00000621269 GRAMD2BQ96HH9 432 aa17.63■□□□□ 0.41
ATXN3-253ENST00000621269 BCL7BQ9BQE9 202 aa17.63■□□□□ 0.41
ATXN3-253ENST00000621269 CACFD1Q9UGQ2 172 aa17.63■□□□□ 0.41
ATXN3-253ENST00000621269 RSL24D1Q9UHA3 163 aaKnown RBP17.63■□□□□ 0.41
ATXN3-253ENST00000621269 SCP2D1Q9UJQ7 156 aa17.63■□□□□ 0.41
ATXN3-253ENST00000621269 TMEM56-RWDD3S4R434 201 aa17.63■□□□□ 0.41
ATXN3-253ENST00000621269 CA1P00915 261 aaPredicted RBP17.62■□□□□ 0.41
ATXN3-253ENST00000621269 SLC25A4P12235 298 aa17.62■□□□□ 0.41
ATXN3-253ENST00000621269 P2RY1P47900 373 aa17.62■□□□□ 0.41
ATXN3-253ENST00000621269 STHQ8IWL8 128 aa17.62■□□□□ 0.41
ATXN3-253ENST00000621269 SLC24A4Q8NFF2 622 aa17.62■□□□□ 0.41
ATXN3-253ENST00000621269 STXBP6Q8NFX7 210 aa17.62■□□□□ 0.41
ATXN3-253ENST00000621269 OR1S2Q8NGQ3 325 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms