RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 AMBPP02760 352 aa17.55■□□□□ 0.4
SH3D19-211ENST00000604030 LY6EQ16553 131 aa17.55■□□□□ 0.4
SH3D19-211ENST00000604030 IGKV1D-8A0A087WSZ0 117 aa17.55■□□□□ 0.4
SH3D19-211ENST00000604030 Q6ZS49 121 aa17.55■□□□□ 0.4
SH3D19-211ENST00000604030 ZNF418Q8TF45 676 aaPredicted RBP17.55■□□□□ 0.4
SH3D19-211ENST00000604030 DERL1Q9BUN8 251 aa17.55■□□□□ 0.4
SH3D19-211ENST00000604030 GATA2P23769 480 aaPredicted RBP17.55■□□□□ 0.4
SH3D19-211ENST00000604030 FAM27E3Q08E93 113 aa17.55■□□□□ 0.4
SH3D19-211ENST00000604030 NMSQ5H8A3 153 aa17.55■□□□□ 0.4
SH3D19-211ENST00000604030 C1orf194Q5T5A4 169 aa17.55■□□□□ 0.4
SH3D19-211ENST00000604030 CENPVQ7Z7K6 275 aaPredicted RBP17.55■□□□□ 0.4
SH3D19-211ENST00000604030 C8orf46Q8TAG6 207 aa17.54■□□□□ 0.4
SH3D19-211ENST00000604030 A0A0G2JMZ2 1700 aa17.54■□□□□ 0.4
SH3D19-211ENST00000604030 LRRC37A2A6NM11 1700 aa17.54■□□□□ 0.4
SH3D19-211ENST00000604030 DNAJC13O75165 2243 aa17.54■□□□□ 0.4
SH3D19-211ENST00000604030 MYOD1P15172 320 aa17.54■□□□□ 0.4
SH3D19-211ENST00000604030 BSPH1Q075Z2 132 aa17.54■□□□□ 0.4
SH3D19-211ENST00000604030 WNK3Q9BYP7 1800 aa17.54■□□□□ 0.4
SH3D19-211ENST00000604030 TRAV21A0A0B4J279 112 aa17.54■□□□□ 0.4
SH3D19-211ENST00000604030 ATXN7O15265 892 aaPredicted RBP17.54■□□□□ 0.4
SH3D19-211ENST00000604030 RAMP3O60896 148 aa17.54■□□□□ 0.4
SH3D19-211ENST00000604030 CSRP2Q16527 193 aa17.54■□□□□ 0.4
SH3D19-211ENST00000604030 TREML4Q6UXN2 200 aa17.54■□□□□ 0.4
SH3D19-211ENST00000604030 TMEM14EPQ6UXP3 125 aa17.54■□□□□ 0.4
SH3D19-211ENST00000604030 GLRX5Q86SX6 157 aa17.54■□□□□ 0.4
SH3D19-211ENST00000604030 MTCL1Q9Y4B5 1905 aaKnown RBP17.53■□□□□ 0.4
SH3D19-211ENST00000604030 CA1P00915 261 aaPredicted RBP17.53■□□□□ 0.4
SH3D19-211ENST00000604030 OR13C6PQ8NH95 151 aa17.53■□□□□ 0.4
SH3D19-211ENST00000604030 GGTLC1Q9BX51 225 aa17.53■□□□□ 0.4
SH3D19-211ENST00000604030 SIPA1L1O43166 1804 aa17.53■□□□□ 0.4
SH3D19-211ENST00000604030 OR9G9P0C7N8 305 aa17.53■□□□□ 0.4
SH3D19-211ENST00000604030 CYSLTR1Q9Y271 337 aa17.53■□□□□ 0.4
SH3D19-211ENST00000604030 PLXNA1Q9UIW2 1896 aa17.53■□□□□ 0.4
SH3D19-211ENST00000604030 CFPP27918 469 aa17.53■□□□□ 0.4
SH3D19-211ENST00000604030 DUSP14O95147 198 aaKnown RBP17.52■□□□□ 0.4
SH3D19-211ENST00000604030 CD55P08174 381 aa17.52■□□□□ 0.4
SH3D19-211ENST00000604030 CFHR1Q03591 330 aa17.52■□□□□ 0.4
SH3D19-211ENST00000604030 NABP1Q96AH0 204 aa17.52■□□□□ 0.4
SH3D19-211ENST00000604030 IGHV3-35A0A0C4DH35 117 aa17.52■□□□□ 0.39
SH3D19-211ENST00000604030 RBMY1BA6NDE4 496 aaKnown RBP17.52■□□□□ 0.39
SH3D19-211ENST00000604030 RBMY1EA6NEQ0 496 aaKnown RBP17.52■□□□□ 0.39
SH3D19-211ENST00000604030 CXCL1P09341 107 aa17.52■□□□□ 0.39
SH3D19-211ENST00000604030 RBMY1DP0C7P1 496 aaKnown RBP17.52■□□□□ 0.39
SH3D19-211ENST00000604030 RBMY1A1P0DJD3 496 aaKnown RBP17.52■□□□□ 0.39
SH3D19-211ENST00000604030 RBMY1CP0DJD4 496 aa17.52■□□□□ 0.39
SH3D19-211ENST00000604030 AKIRIN1Q9H9L7 192 aaPredicted RBP17.52■□□□□ 0.39
SH3D19-211ENST00000604030 IGKV1-12A0A0C4DH73 117 aa17.52■□□□□ 0.39
SH3D19-211ENST00000604030 IGKV1D-12P01611 117 aa17.52■□□□□ 0.39
SH3D19-211ENST00000604030 COQ2Q96H96 371 aa17.52■□□□□ 0.39
SH3D19-211ENST00000604030 A0A087WV48 116 aa17.51■□□□□ 0.39
SH3D19-211ENST00000604030 IFI27P40305 119 aaPredicted RBP17.51■□□□□ 0.39
SH3D19-211ENST00000604030 ERVK11-1P61568 191 aa17.51■□□□□ 0.39
SH3D19-211ENST00000604030 C9orf106Q8NAJ2 232 aa17.51■□□□□ 0.39
SH3D19-211ENST00000604030 SNAI2O43623 268 aa17.51■□□□□ 0.39
SH3D19-211ENST00000604030 RNF5Q99942 180 aa17.51■□□□□ 0.39
SH3D19-211ENST00000604030 TPRP12270 2363 aaKnown RBP17.51■□□□□ 0.39
SH3D19-211ENST00000604030 CELA3BP08861 270 aa17.51■□□□□ 0.39
SH3D19-211ENST00000604030 MST1P26927 711 aa17.51■□□□□ 0.39
SH3D19-211ENST00000604030 FAM201AQ5SY85 155 aa17.51■□□□□ 0.39
SH3D19-211ENST00000604030 LINC01551Q86U37 167 aa17.51■□□□□ 0.39
SH3D19-211ENST00000604030 APOMO95445 188 aa17.51■□□□□ 0.39
SH3D19-211ENST00000604030 GNG5P63218 68 aa17.51■□□□□ 0.39
SH3D19-211ENST00000604030 IFI27L1Q96BM0 104 aa17.5■□□□□ 0.39
SH3D19-211ENST00000604030 CNTFRP26992 372 aa17.5■□□□□ 0.39
SH3D19-211ENST00000604030 ACTL10Q5JWF8 245 aa17.5■□□□□ 0.39
SH3D19-211ENST00000604030 CRIPAKQ8N1N5 446 aa17.5■□□□□ 0.39
SH3D19-211ENST00000604030 OR2K2Q8NGT1 345 aa17.5■□□□□ 0.39
SH3D19-211ENST00000604030 CCL19Q99731 98 aa17.5■□□□□ 0.39
SH3D19-211ENST00000604030 RPUSD1Q9UJJ7 312 aaKnown RBP17.5■□□□□ 0.39
SH3D19-211ENST00000604030 OTOFQ9HC10 1997 aa17.49■□□□□ 0.39
SH3D19-211ENST00000604030 NDUFA3O95167 84 aa17.49■□□□□ 0.39
SH3D19-211ENST00000604030 IGKCP01834 107 aa17.49■□□□□ 0.39
SH3D19-211ENST00000604030 ZNF124Q15973 351 aa17.49■□□□□ 0.39
SH3D19-211ENST00000604030 CLEC19AQ6UXS0 136 aa17.49■□□□□ 0.39
SH3D19-211ENST00000604030 SRRM5B3KS81 715 aa17.49■□□□□ 0.39
SH3D19-211ENST00000604030 SSBP4Q9BWG4 385 aaPredicted RBP17.49■□□□□ 0.39
SH3D19-211ENST00000604030 MRPL27Q9P0M9 148 aaKnown RBP17.49■□□□□ 0.39
SH3D19-211ENST00000604030 LOC285556D6RIA3 1793 aa17.49■□□□□ 0.39
SH3D19-211ENST00000604030 FNDC10F2Z333 226 aa17.49■□□□□ 0.39
SH3D19-211ENST00000604030 ZNF585BQ52M93 769 aa17.49■□□□□ 0.39
SH3D19-211ENST00000604030 TMEM42Q69YG0 159 aa17.49■□□□□ 0.39
SH3D19-211ENST00000604030 NHP2Q9NX24 153 aaKnown RBP17.49■□□□□ 0.39
SH3D19-211ENST00000604030 COLQQ9Y215 455 aaPredicted RBP17.49■□□□□ 0.39
SH3D19-211ENST00000604030 OVOL1O14753 267 aa17.48■□□□□ 0.39
SH3D19-211ENST00000604030 LINC01560Q8TB33 94 aa17.48■□□□□ 0.39
SH3D19-211ENST00000604030 VSIRQ9H7M9 311 aa17.48■□□□□ 0.39
SH3D19-211ENST00000604030 PYYP10082 97 aa17.48■□□□□ 0.39
SH3D19-211ENST00000604030 ZFP36L1Q07352 338 aaKnown RBP17.48■□□□□ 0.39
SH3D19-211ENST00000604030 DUX3Q96PT4 197 aa17.48■□□□□ 0.39
SH3D19-211ENST00000604030 IGHV3OR16-13A0A075B7E8 117 aa17.48■□□□□ 0.39
SH3D19-211ENST00000604030 IGHV3-74A0A0B4J1X5 117 aa17.48■□□□□ 0.39
SH3D19-211ENST00000604030 PEMTQ9UBM1 199 aa17.48■□□□□ 0.39
SH3D19-211ENST00000604030 DOCK4Q8N1I0 1966 aa17.48■□□□□ 0.39
SH3D19-211ENST00000604030 HOXA3O43365 443 aaPredicted RBP17.47■□□□□ 0.39
SH3D19-211ENST00000604030 CCL3L1P16619 93 aa17.47■□□□□ 0.39
SH3D19-211ENST00000604030 GBF1Q92538 1859 aa17.47■□□□□ 0.39
SH3D19-211ENST00000604030 NUDT10Q8NFP7 164 aa17.47■□□□□ 0.39
SH3D19-211ENST00000604030 NUDT11Q96G61 164 aa17.47■□□□□ 0.39
SH3D19-211ENST00000604030 RNASE1P07998 156 aaKnown RBP17.47■□□□□ 0.39
SH3D19-211ENST00000604030 QRFPP83859 136 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms