RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 PPP5D1E7EU14 171 aa15.41■□□□□ 0.06
SHKBP1-222ENST00000600320 CCL24O00175 119 aa15.41■□□□□ 0.06
SHKBP1-222ENST00000600320 HSPB1P04792 205 aaKnown RBP15.41■□□□□ 0.06
SHKBP1-222ENST00000600320 METTL15P1P0C7V9 234 aa15.41■□□□□ 0.06
SHKBP1-222ENST00000600320 PVALBP20472 110 aaPredicted RBP15.41■□□□□ 0.06
SHKBP1-222ENST00000600320 BCAP31P51572 246 aa15.41■□□□□ 0.06
SHKBP1-222ENST00000600320 OR1N2Q8NGR9 330 aa15.41■□□□□ 0.06
SHKBP1-222ENST00000600320 ZC4H2Q9NQZ6 224 aa15.41■□□□□ 0.06
SHKBP1-222ENST00000600320 IGSF23A1L1A6 192 aa15.4■□□□□ 0.06
SHKBP1-222ENST00000600320 RLN2P04090 185 aa15.4■□□□□ 0.06
SHKBP1-222ENST00000600320 CLEC3BP05452 202 aa15.4■□□□□ 0.06
SHKBP1-222ENST00000600320 GPR183P32249 361 aa15.4■□□□□ 0.06
SHKBP1-222ENST00000600320 CAV2P51636 162 aa15.4■□□□□ 0.06
SHKBP1-222ENST00000600320 MFAP4P55083 255 aa15.4■□□□□ 0.06
SHKBP1-222ENST00000600320 ARL16Q0P5N6 197 aa15.4■□□□□ 0.06
SHKBP1-222ENST00000600320 FHL3Q13643 280 aa15.4■□□□□ 0.06
SHKBP1-222ENST00000600320 ACSM6Q6P461 480 aa15.4■□□□□ 0.06
SHKBP1-222ENST00000600320 PRSS54Q6PEW0 395 aa15.4■□□□□ 0.06
SHKBP1-222ENST00000600320 SLC16A13Q7RTY0 426 aa15.4■□□□□ 0.06
SHKBP1-222ENST00000600320 MBD2Q9UBB5 411 aa15.4■□□□□ 0.06
SHKBP1-222ENST00000600320 RPS10-NUDT3A0A1W2PQS6 291 aa15.39■□□□□ 0.05
SHKBP1-222ENST00000600320 E5RGE8 158 aa15.39■□□□□ 0.05
SHKBP1-222ENST00000600320 M0QZ24 198 aa15.39■□□□□ 0.05
SHKBP1-222ENST00000600320 BMPR1BO00238 502 aa15.39■□□□□ 0.05
SHKBP1-222ENST00000600320 MYCNOSP40205 109 aa15.39■□□□□ 0.05
SHKBP1-222ENST00000600320 RAP2BP61225 183 aa15.39■□□□□ 0.05
SHKBP1-222ENST00000600320 Q56UQ5 140 aa15.39■□□□□ 0.05
SHKBP1-222ENST00000600320 OR8G2PQ6IF36 304 aa15.39■□□□□ 0.05
SHKBP1-222ENST00000600320 TMEM252Q8N6L7 170 aa15.39■□□□□ 0.05
SHKBP1-222ENST00000600320 UBAC2Q8NBM4 344 aa15.39■□□□□ 0.05
SHKBP1-222ENST00000600320 OR4F17Q8NGA8 305 aa15.39■□□□□ 0.05
SHKBP1-222ENST00000600320 ASB13Q8WXK3 278 aa15.39■□□□□ 0.05
SHKBP1-222ENST00000600320 OR4F4Q96R69 305 aa15.39■□□□□ 0.05
SHKBP1-222ENST00000600320 RANGRFQ9HD47 186 aaPredicted RBP15.39■□□□□ 0.05
SHKBP1-222ENST00000600320 LYRM2Q9NU23 88 aaPredicted RBP15.39■□□□□ 0.05
SHKBP1-222ENST00000600320 OR2T8A6NH00 312 aa15.38■□□□□ 0.05
SHKBP1-222ENST00000600320 LINC01619G3V211 115 aa15.38■□□□□ 0.05
SHKBP1-222ENST00000600320 G3V3Q6 166 aa15.38■□□□□ 0.05
SHKBP1-222ENST00000600320 FCGR2BP31994 310 aaPredicted RBP15.38■□□□□ 0.05
SHKBP1-222ENST00000600320 SLURP1P55000 103 aa15.38■□□□□ 0.05
SHKBP1-222ENST00000600320 ZNF616Q08AN1 781 aa15.38■□□□□ 0.05
SHKBP1-222ENST00000600320 DPF1Q92782 380 aa15.38■□□□□ 0.05
SHKBP1-222ENST00000600320 ZNF414Q96IQ9 312 aa15.38■□□□□ 0.05
SHKBP1-222ENST00000600320 TGOLN2O43493 480 aa15.37■□□□□ 0.05
SHKBP1-222ENST00000600320 CST7O76096 145 aa15.37■□□□□ 0.05
SHKBP1-222ENST00000600320 SLC25A4P12235 298 aa15.37■□□□□ 0.05
SHKBP1-222ENST00000600320 LYL1P12980 280 aa15.37■□□□□ 0.05
SHKBP1-222ENST00000600320 ADMP35318 185 aa15.37■□□□□ 0.05
SHKBP1-222ENST00000600320 ARL3P36405 182 aa15.37■□□□□ 0.05
SHKBP1-222ENST00000600320 GPX4P36969 197 aaPredicted RBP15.37■□□□□ 0.05
SHKBP1-222ENST00000600320 P2RY1P47900 373 aa15.37■□□□□ 0.05
SHKBP1-222ENST00000600320 RND2P52198 227 aa15.37■□□□□ 0.05
SHKBP1-222ENST00000600320 OR2T35Q8NGX2 323 aa15.37■□□□□ 0.05
SHKBP1-222ENST00000600320 OR4X1Q8NH49 305 aa15.37■□□□□ 0.05
SHKBP1-222ENST00000600320 TXN2Q99757 166 aa15.37■□□□□ 0.05
SHKBP1-222ENST00000600320 CHRDL1Q9BU40 450 aa15.37■□□□□ 0.05
SHKBP1-222ENST00000600320 SMLR1H3BR10 107 aa15.36■□□□□ 0.05
SHKBP1-222ENST00000600320 CLN5O75503 358 aa15.36■□□□□ 0.05
SHKBP1-222ENST00000600320 PF4P02776 101 aa15.36■□□□□ 0.05
SHKBP1-222ENST00000600320 PET100P0DJ07 73 aa15.36■□□□□ 0.05
SHKBP1-222ENST00000600320 HOXD3P31249 432 aaPredicted RBP15.36■□□□□ 0.05
SHKBP1-222ENST00000600320 GAMTQ14353 236 aa15.36■□□□□ 0.05
SHKBP1-222ENST00000600320 FAM209BQ5JX69 171 aa15.36■□□□□ 0.05
SHKBP1-222ENST00000600320 ETFRF1Q6IPR1 90 aa15.36■□□□□ 0.05
SHKBP1-222ENST00000600320 ACOT7LQ6ZUV0 252 aa15.36■□□□□ 0.05
SHKBP1-222ENST00000600320 NPIPB3Q92617 1050 aa15.36■□□□□ 0.05
SHKBP1-222ENST00000600320 BSCL2Q96G97 398 aaPredicted RBP15.36■□□□□ 0.05
SHKBP1-222ENST00000600320 ATP6V0BQ99437 205 aa15.36■□□□□ 0.05
SHKBP1-222ENST00000600320 GNG7O60262 68 aa15.35■□□□□ 0.05
SHKBP1-222ENST00000600320 OR2C1O95371 312 aa15.35■□□□□ 0.05
SHKBP1-222ENST00000600320 CTSGP08311 255 aa15.35■□□□□ 0.05
SHKBP1-222ENST00000600320 NPBWR1P48145 328 aa15.35■□□□□ 0.05
SHKBP1-222ENST00000600320 LINC00482Q8N8I6 264 aa15.35■□□□□ 0.05
SHKBP1-222ENST00000600320 TMEM116Q8NCL8 245 aa15.35■□□□□ 0.05
SHKBP1-222ENST00000600320 OR10P1Q8NGE3 313 aa15.35■□□□□ 0.05
SHKBP1-222ENST00000600320 THAP6Q8TBB0 222 aa15.35■□□□□ 0.05
SHKBP1-222ENST00000600320 CACNG8Q8WXS5 425 aa15.35■□□□□ 0.05
SHKBP1-222ENST00000600320 DCUN1D4Q92564 292 aa15.35■□□□□ 0.05
SHKBP1-222ENST00000600320 ACY3Q96HD9 319 aa15.35■□□□□ 0.05
SHKBP1-222ENST00000600320 SLC35E1Q96K37 410 aa15.35■□□□□ 0.05
SHKBP1-222ENST00000600320 IGHV3-35A0A0C4DH35 117 aa15.34■□□□□ 0.05
SHKBP1-222ENST00000600320 GGCTO75223 188 aaKnown RBP15.34■□□□□ 0.05
SHKBP1-222ENST00000600320 SULT1A1P50225 295 aa15.34■□□□□ 0.05
SHKBP1-222ENST00000600320 EWSR1Q01844 656 aaKnown RBP eCLIP15.34■□□□□ 0.05
SHKBP1-222ENST00000600320 TMEM217Q8N7C4 229 aa15.34■□□□□ 0.05
SHKBP1-222ENST00000600320 DLX4Q92988 240 aaPredicted RBP15.34■□□□□ 0.05
SHKBP1-222ENST00000600320 GAR1Q9NY12 217 aaKnown RBP15.34■□□□□ 0.05
SHKBP1-222ENST00000600320 IGLC1P0CG04 106 aa15.33■□□□□ 0.04
SHKBP1-222ENST00000600320 ZP3P21754 424 aa15.33■□□□□ 0.04
SHKBP1-222ENST00000600320 DLK1P80370 383 aa15.33■□□□□ 0.04
SHKBP1-222ENST00000600320 NHLH2Q02577 135 aa15.33■□□□□ 0.04
SHKBP1-222ENST00000600320 FGL1Q08830 312 aa15.33■□□□□ 0.04
SHKBP1-222ENST00000600320 RPEL1Q2QD12 228 aa15.33■□□□□ 0.04
SHKBP1-222ENST00000600320 TIGITQ495A1 244 aa15.33■□□□□ 0.04
SHKBP1-222ENST00000600320 ST6GAL2Q96JF0 529 aa15.33■□□□□ 0.04
SHKBP1-222ENST00000600320 IGKV1D-37A0A075B6S9 117 aa15.32■□□□□ 0.04
SHKBP1-222ENST00000600320 NUPL2O15504 423 aaKnown RBP15.32■□□□□ 0.04
SHKBP1-222ENST00000600320 IGKV1-17P01599 117 aa15.32■□□□□ 0.04
SHKBP1-222ENST00000600320 SLC38A11Q08AI6 406 aa15.32■□□□□ 0.04
SHKBP1-222ENST00000600320 KLF5Q13887 457 aaPredicted RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms