RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 P0C879 139 aa7.22□□□□□ -1.25
VRK3-216ENST00000599342 SMIM18P0DKX4 95 aa7.22□□□□□ -1.25
VRK3-216ENST00000599342 RNASE2P10153 161 aaKnown RBP7.22□□□□□ -1.25
VRK3-216ENST00000599342 NPPCP23582 126 aa7.22□□□□□ -1.25
VRK3-216ENST00000599342 UCP1P25874 307 aa7.22□□□□□ -1.25
VRK3-216ENST00000599342 MRPS10P82664 201 aaKnown RBP7.22□□□□□ -1.25
VRK3-216ENST00000599342 SSBP1Q04837 148 aaKnown RBP7.22□□□□□ -1.25
VRK3-216ENST00000599342 MEF2DQ14814 521 aa7.22□□□□□ -1.25
VRK3-216ENST00000599342 GPR141Q7Z602 305 aa7.22□□□□□ -1.25
VRK3-216ENST00000599342 FAM219AQ8IW50 185 aa7.22□□□□□ -1.25
VRK3-216ENST00000599342 MARCH1Q8TCQ1 289 aa7.22□□□□□ -1.25
VRK3-216ENST00000599342 TMEM230Q96A57 120 aa7.22□□□□□ -1.25
VRK3-216ENST00000599342 NARS2Q96I59 477 aaKnown RBP7.22□□□□□ -1.25
VRK3-216ENST00000599342 METTL26Q96S19 204 aa7.22□□□□□ -1.25
VRK3-216ENST00000599342 RARRES2Q99969 163 aa7.22□□□□□ -1.25
VRK3-216ENST00000599342 MS4A6AQ9H2W1 248 aa7.22□□□□□ -1.25
VRK3-216ENST00000599342 VSIRQ9H7M9 311 aa7.22□□□□□ -1.25
VRK3-216ENST00000599342 ZFAND3Q9H8U3 227 aa7.22□□□□□ -1.25
VRK3-216ENST00000599342 RABAC1Q9UI14 185 aa7.22□□□□□ -1.25
VRK3-216ENST00000599342 TRAV2A0A0B4J234 112 aa7.21□□□□□ -1.26
VRK3-216ENST00000599342 TEX13DA0A0J9YY54 714 aaPredicted RBP7.21□□□□□ -1.26
VRK3-216ENST00000599342 A0A1B0GU03 582 aa7.21□□□□□ -1.26
VRK3-216ENST00000599342 RPS10-NUDT3A0A1W2PQS6 291 aa7.21□□□□□ -1.26
VRK3-216ENST00000599342 DISC1C4P0D8 188 aa7.21□□□□□ -1.26
VRK3-216ENST00000599342 CLN5O75503 358 aa7.21□□□□□ -1.26
VRK3-216ENST00000599342 CA1P00915 261 aaPredicted RBP7.21□□□□□ -1.26
VRK3-216ENST00000599342 APOHP02749 345 aaPredicted RBP7.21□□□□□ -1.26
VRK3-216ENST00000599342 OR5AC1P0C628 307 aa7.21□□□□□ -1.26
VRK3-216ENST00000599342 RPL5P46777 297 aaKnown RBP7.21□□□□□ -1.26
VRK3-216ENST00000599342 DEFB131AP59861 70 aa7.21□□□□□ -1.26
VRK3-216ENST00000599342 SPCS3P61009 180 aa7.21□□□□□ -1.26
VRK3-216ENST00000599342 LEMD1Q68G75 181 aa7.21□□□□□ -1.26
VRK3-216ENST00000599342 PVRIGQ6DKI7 326 aa7.21□□□□□ -1.26
VRK3-216ENST00000599342 FAAP20Q6NZ36 180 aa7.21□□□□□ -1.26
VRK3-216ENST00000599342 OR4X1Q8NH49 305 aa7.21□□□□□ -1.26
VRK3-216ENST00000599342 RBPMSQ93062 196 aaKnown RBP7.21□□□□□ -1.26
VRK3-216ENST00000599342 MRPS26Q9BYN8 205 aaKnown RBP7.21□□□□□ -1.26
VRK3-216ENST00000599342 MFFQ9GZY8 342 aa7.21□□□□□ -1.26
VRK3-216ENST00000599342 TMEM222Q9H0R3 208 aa7.21□□□□□ -1.26
VRK3-216ENST00000599342 ALMS1Q8TCU4 4167 aa7.21□□□□□ -1.26
VRK3-216ENST00000599342 TRAV30A0A087WSZ9 112 aa7.2□□□□□ -1.26
VRK3-216ENST00000599342 A0A0G2JRQ6 117 aa7.2□□□□□ -1.26
VRK3-216ENST00000599342 CDS2O95674 445 aa7.2□□□□□ -1.26
VRK3-216ENST00000599342 HTR2BP41595 481 aa7.2□□□□□ -1.26
VRK3-216ENST00000599342 EIF2B2P49770 351 aaKnown RBP7.2□□□□□ -1.26
VRK3-216ENST00000599342 DHODHQ02127 395 aa7.2□□□□□ -1.26
VRK3-216ENST00000599342 IL18Q14116 193 aa7.2□□□□□ -1.26
VRK3-216ENST00000599342 TMEM187Q14656 261 aa7.2□□□□□ -1.26
VRK3-216ENST00000599342 SURF2Q15527 256 aaPredicted RBP7.2□□□□□ -1.26
VRK3-216ENST00000599342 STHQ8IWL8 128 aa7.2□□□□□ -1.26
VRK3-216ENST00000599342 STXBP6Q8NFX7 210 aa7.2□□□□□ -1.26
VRK3-216ENST00000599342 OR11H2Q8NH07 326 aa7.2□□□□□ -1.26
VRK3-216ENST00000599342 OR52E5Q8NH55 327 aa7.2□□□□□ -1.26
VRK3-216ENST00000599342 PHLDA1Q8WV24 401 aaPredicted RBP7.2□□□□□ -1.26
VRK3-216ENST00000599342 SMIM4Q8WVI0 70 aa7.2□□□□□ -1.26
VRK3-216ENST00000599342 GRAMD2BQ96HH9 432 aa7.2□□□□□ -1.26
VRK3-216ENST00000599342 MIXL1Q9H2W2 232 aa7.2□□□□□ -1.26
VRK3-216ENST00000599342 FNDC4Q9H6D8 234 aaPredicted RBP7.2□□□□□ -1.26
VRK3-216ENST00000599342 NAA60Q9H7X0 242 aa7.2□□□□□ -1.26
VRK3-216ENST00000599342 HEYLQ9NQ87 328 aaPredicted RBP7.2□□□□□ -1.26
VRK3-216ENST00000599342 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.2□□□□□ -1.26
VRK3-216ENST00000599342 EPPK1P58107 5090 aaKnown RBP7.2□□□□□ -1.26
VRK3-216ENST00000599342 CEBPZOSA8MTT3 80 aa7.19□□□□□ -1.26
VRK3-216ENST00000599342 AKAIN1P0CW23 69 aa7.19□□□□□ -1.26
VRK3-216ENST00000599342 CRYBB3P26998 211 aa7.19□□□□□ -1.26
VRK3-216ENST00000599342 P2RY1P47900 373 aa7.19□□□□□ -1.26
VRK3-216ENST00000599342 SPCS2Q15005 226 aa7.19□□□□□ -1.26
VRK3-216ENST00000599342 RBMS2Q15434 407 aaKnown RBP7.19□□□□□ -1.26
VRK3-216ENST00000599342 BSXQ3C1V8 233 aa7.19□□□□□ -1.26
VRK3-216ENST00000599342 TMEM268Q5VZI3 342 aa7.19□□□□□ -1.26
VRK3-216ENST00000599342 Q6ZRM9 215 aa7.19□□□□□ -1.26
VRK3-216ENST00000599342 LILRB2Q8N423 598 aa7.19□□□□□ -1.26
VRK3-216ENST00000599342 FAM24BQ8N5W8 94 aa7.19□□□□□ -1.26
VRK3-216ENST00000599342 SLC24A4Q8NFF2 622 aa7.19□□□□□ -1.26
VRK3-216ENST00000599342 OR4C16Q8NGL9 310 aa7.19□□□□□ -1.26
VRK3-216ENST00000599342 OR1S2Q8NGQ3 325 aa7.19□□□□□ -1.26
VRK3-216ENST00000599342 C11orf45Q8TAV5 145 aa7.19□□□□□ -1.26
VRK3-216ENST00000599342 GLYATL2Q8WU03 294 aa7.19□□□□□ -1.26
VRK3-216ENST00000599342 DIRAS2Q96HU8 199 aa7.19□□□□□ -1.26
VRK3-216ENST00000599342 PRRT1Q99946 306 aa7.19□□□□□ -1.26
VRK3-216ENST00000599342 RTBDNQ9BSG5 229 aaPredicted RBP7.19□□□□□ -1.26
VRK3-216ENST00000599342 C11orf68Q9H3H3 251 aaKnown RBP7.19□□□□□ -1.26
VRK3-216ENST00000599342 MRPL36Q9P0J6 103 aaKnown RBP7.19□□□□□ -1.26
VRK3-216ENST00000599342 RABL2AQ9UBK7 228 aaPredicted RBP7.19□□□□□ -1.26
VRK3-216ENST00000599342 CACNG5Q9UF02 275 aa7.19□□□□□ -1.26
VRK3-216ENST00000599342 FBXL17Q9UF56 701 aa7.19□□□□□ -1.26
VRK3-216ENST00000599342 CACFD1Q9UGQ2 172 aa7.19□□□□□ -1.26
VRK3-216ENST00000599342 RABL2BQ9UNT1 228 aa7.19□□□□□ -1.26
VRK3-216ENST00000599342 PLECQ15149 4684 aaKnown RBP7.18□□□□□ -1.26
VRK3-216ENST00000599342 CRYM-AS1A6NIL9 109 aa7.18□□□□□ -1.26
VRK3-216ENST00000599342 CTDSP2O14595 271 aa7.18□□□□□ -1.26
VRK3-216ENST00000599342 CTDSPLO15194 276 aa7.18□□□□□ -1.26
VRK3-216ENST00000599342 IFNA4P05014 189 aa7.18□□□□□ -1.26
VRK3-216ENST00000599342 SLC25A4P12235 298 aa7.18□□□□□ -1.26
VRK3-216ENST00000599342 RND2P52198 227 aa7.18□□□□□ -1.26
VRK3-216ENST00000599342 MLANAQ16655 118 aa7.18□□□□□ -1.26
VRK3-216ENST00000599342 TIGITQ495A1 244 aa7.18□□□□□ -1.26
VRK3-216ENST00000599342 AARDQ4LEZ3 155 aa7.18□□□□□ -1.26
VRK3-216ENST00000599342 C2orf83Q53S99 150 aa7.18□□□□□ -1.26
VRK3-216ENST00000599342 ETFRF1Q6IPR1 90 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms