RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, human

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HOMER3-208	ENST00000595756	FAM90A26	D6RGX4	464 aa		13.5	□□□□□ -0.25
HOMER3-208	ENST00000595756	PRAF2	O60831	178 aa		13.5	□□□□□ -0.25
HOMER3-208	ENST00000595756	NDUFB8	O95169	186 aa		13.5	□□□□□ -0.25
HOMER3-208	ENST00000595756	IL5	P05113	134 aa		13.5	□□□□□ -0.25
HOMER3-208	ENST00000595756	FOLR2	P14207	255 aa		13.5	□□□□□ -0.25
HOMER3-208	ENST00000595756	DEFB114	Q30KQ6	69 aa		13.5	□□□□□ -0.25
HOMER3-208	ENST00000595756	VN1R17P	Q8TDU5	208 aa		13.5	□□□□□ -0.25
HOMER3-208	ENST00000595756	ZNF431	Q8TF32	576 aa	Predicted RBP	13.5	□□□□□ -0.25
HOMER3-208	ENST00000595756	HIPK2	Q9H2X6	1198 aa		13.5	□□□□□ -0.25
HOMER3-208	ENST00000595756	HSPB7	Q9UBY9	170 aa		13.5	□□□□□ -0.25
HOMER3-208	ENST00000595756	LCE6A	A0A183	80 aa		13.49	□□□□□ -0.25
HOMER3-208	ENST00000595756	ZNF785	A8K8V0	405 aa		13.49	□□□□□ -0.25
HOMER3-208	ENST00000595756	CORT	O00230	105 aa		13.49	□□□□□ -0.25
HOMER3-208	ENST00000595756	MED6	O75586	246 aa		13.49	□□□□□ -0.25
HOMER3-208	ENST00000595756	OR2C1	O95371	312 aa		13.49	□□□□□ -0.25
HOMER3-208	ENST00000595756	HTR2B	P41595	481 aa		13.49	□□□□□ -0.25
HOMER3-208	ENST00000595756	TNFRSF9	Q07011	255 aa		13.49	□□□□□ -0.25
HOMER3-208	ENST00000595756	GGNBP1	Q5YKI7	109 aa		13.49	□□□□□ -0.25
HOMER3-208	ENST00000595756	ZFAND6	Q6FIF0	208 aa		13.49	□□□□□ -0.25
HOMER3-208	ENST00000595756	NOXA1	Q86UR1	476 aa		13.49	□□□□□ -0.25
HOMER3-208	ENST00000595756	ATP6V0B	Q99437	205 aa		13.49	□□□□□ -0.25
HOMER3-208	ENST00000595756	HEYL	Q9NQ87	328 aa	Predicted RBP	13.49	□□□□□ -0.25
HOMER3-208	ENST00000595756	ALMS1	Q8TCU4	4167 aa		13.48	□□□□□ -0.25
HOMER3-208	ENST00000595756	PITX3	O75364	302 aa		13.48	□□□□□ -0.25
HOMER3-208	ENST00000595756	IGHV3-23	P01764	117 aa		13.48	□□□□□ -0.25
HOMER3-208	ENST00000595756	CD7	P09564	240 aa		13.48	□□□□□ -0.25
HOMER3-208	ENST00000595756	EDN2	P20800	178 aa		13.48	□□□□□ -0.25
HOMER3-208	ENST00000595756	ATP5I	P56385	69 aa	Predicted RBP	13.48	□□□□□ -0.25
HOMER3-208	ENST00000595756	SPINK9	Q5DT21	86 aa		13.48	□□□□□ -0.25
HOMER3-208	ENST00000595756	CLEC19A	Q6UXS0	136 aa		13.48	□□□□□ -0.25
HOMER3-208	ENST00000595756	C12orf45	Q8N5I9	185 aa	Predicted RBP	13.48	□□□□□ -0.25
HOMER3-208	ENST00000595756	MARVELD1	Q9BSK0	173 aa		13.48	□□□□□ -0.25
HOMER3-208	ENST00000595756	TMEM213	A2RRL7	107 aa		13.47	□□□□□ -0.25
HOMER3-208	ENST00000595756	INMT-MINDY4	F8WBC2	141 aa		13.47	□□□□□ -0.25
HOMER3-208	ENST00000595756	PTTG1	O95997	202 aa		13.47	□□□□□ -0.25
HOMER3-208	ENST00000595756	FAM106A	Q4KMX7	169 aa		13.47	□□□□□ -0.25
HOMER3-208	ENST00000595756	OR52B4	Q8NGK2	314 aa		13.47	□□□□□ -0.25
HOMER3-208	ENST00000595756	GAR1	Q9NY12	217 aa	Known RBP	13.47	□□□□□ -0.25
HOMER3-208	ENST00000595756		U3KQ87	197 aa		13.47	□□□□□ -0.25
HOMER3-208	ENST00000595756	MFSD2B	A6NFX1	497 aa		13.46	□□□□□ -0.25
HOMER3-208	ENST00000595756	SNRPGP15	A8MWD9	76 aa		13.46	□□□□□ -0.25
HOMER3-208	ENST00000595756	ADAP1	O75689	374 aa		13.46	□□□□□ -0.25
HOMER3-208	ENST00000595756	CBLN1	P23435	193 aa		13.46	□□□□□ -0.25
HOMER3-208	ENST00000595756	GUCA2B	Q16661	112 aa		13.46	□□□□□ -0.25
HOMER3-208	ENST00000595756	DEFB125	Q8N687	156 aa		13.46	□□□□□ -0.25
HOMER3-208	ENST00000595756	DTD1	Q8TEA8	209 aa		13.46	□□□□□ -0.25
HOMER3-208	ENST00000595756	CACNG8	Q8WXS5	425 aa		13.46	□□□□□ -0.25
HOMER3-208	ENST00000595756	WDR89	Q96FK6	387 aa	Predicted RBP	13.46	□□□□□ -0.25
HOMER3-208	ENST00000595756	CIB3	Q96Q77	187 aa	Predicted RBP	13.46	□□□□□ -0.25
HOMER3-208	ENST00000595756	SEC22C	Q9BRL7	303 aa		13.46	□□□□□ -0.25
HOMER3-208	ENST00000595756	SRD5A3	Q9H8P0	318 aa		13.46	□□□□□ -0.25
HOMER3-208	ENST00000595756		S4R3C0	116 aa		13.46	□□□□□ -0.25
HOMER3-208	ENST00000595756	HYDIN	Q4G0P3	5121 aa		13.46	□□□□□ -0.25
HOMER3-208	ENST00000595756	OR11H12	B2RN74	326 aa		13.45	□□□□□ -0.26
HOMER3-208	ENST00000595756	RNASE2	P10153	161 aa	Known RBP	13.45	□□□□□ -0.26
HOMER3-208	ENST00000595756	MFAP2	P55001	183 aa		13.45	□□□□□ -0.26
HOMER3-208	ENST00000595756	BSX	Q3C1V8	233 aa		13.45	□□□□□ -0.26
HOMER3-208	ENST00000595756	PVRIG	Q6DKI7	326 aa		13.45	□□□□□ -0.26
HOMER3-208	ENST00000595756	SLC16A13	Q7RTY0	426 aa		13.45	□□□□□ -0.26
HOMER3-208	ENST00000595756	UXS1	Q8NBZ7	420 aa		13.45	□□□□□ -0.26
HOMER3-208	ENST00000595756	MISP3	Q96FF7	219 aa		13.45	□□□□□ -0.26
HOMER3-208	ENST00000595756	WFDC10A	Q9H1F0	79 aa		13.45	□□□□□ -0.26
HOMER3-208	ENST00000595756	RBKS	Q9H477	322 aa		13.45	□□□□□ -0.26
HOMER3-208	ENST00000595756	RETN	Q9HD89	108 aa		13.45	□□□□□ -0.26
HOMER3-208	ENST00000595756	EPPK1	P58107	5090 aa	Known RBP	13.44	□□□□□ -0.26
HOMER3-208	ENST00000595756	RBMY1B	A6NDE4	496 aa	Known RBP	13.44	□□□□□ -0.26
HOMER3-208	ENST00000595756	RBMY1E	A6NEQ0	496 aa	Known RBP	13.44	□□□□□ -0.26
HOMER3-208	ENST00000595756	RBMY1D	P0C7P1	496 aa	Known RBP	13.44	□□□□□ -0.26
HOMER3-208	ENST00000595756	RPP30	P78346	268 aa	Known RBP	13.44	□□□□□ -0.26
HOMER3-208	ENST00000595756	C2orf83	Q53S99	150 aa		13.44	□□□□□ -0.26
HOMER3-208	ENST00000595756	TMEM61	Q8N0U2	210 aa		13.44	□□□□□ -0.26
HOMER3-208	ENST00000595756	SLC24A4	Q8NFF2	622 aa		13.44	□□□□□ -0.26
HOMER3-208	ENST00000595756	ZNF502	Q8TBZ5	544 aa		13.44	□□□□□ -0.26
HOMER3-208	ENST00000595756	SCARB1	Q8WTV0	552 aa		13.44	□□□□□ -0.26
HOMER3-208	ENST00000595756	MARC2	Q969Z3	335 aa		13.44	□□□□□ -0.26
HOMER3-208	ENST00000595756	TXN2	Q99757	166 aa		13.44	□□□□□ -0.26
HOMER3-208	ENST00000595756	C21orf62	Q9NYP8	219 aa		13.44	□□□□□ -0.26
HOMER3-208	ENST00000595756	MLX	Q9UH92	298 aa		13.44	□□□□□ -0.26
HOMER3-208	ENST00000595756	ZNF320	A2RRD8	509 aa		13.43	□□□□□ -0.26
HOMER3-208	ENST00000595756	WRB	O00258	174 aa		13.43	□□□□□ -0.26
HOMER3-208	ENST00000595756	SYNGR2	O43760	224 aa		13.43	□□□□□ -0.26
HOMER3-208	ENST00000595756	NXPH3	O95157	252 aa		13.43	□□□□□ -0.26
HOMER3-208	ENST00000595756	IFNA10	P01566	189 aa		13.43	□□□□□ -0.26
HOMER3-208	ENST00000595756	GPR183	P32249	361 aa		13.43	□□□□□ -0.26
HOMER3-208	ENST00000595756	NKX2-1	P43699	371 aa	Predicted RBP	13.43	□□□□□ -0.26
HOMER3-208	ENST00000595756	MFAP4	P55083	255 aa		13.43	□□□□□ -0.26
HOMER3-208	ENST00000595756	IAH1	Q2TAA2	248 aa	Predicted RBP	13.43	□□□□□ -0.26
HOMER3-208	ENST00000595756	SPSB3	Q6PJ21	355 aa		13.43	□□□□□ -0.26
HOMER3-208	ENST00000595756	RNASEH2C	Q8TDP1	164 aa	Known RBP	13.43	□□□□□ -0.26
HOMER3-208	ENST00000595756	RPS10-NUDT3	A0A1W2PQS6	291 aa		13.42	□□□□□ -0.26
HOMER3-208	ENST00000595756		I3L2K1	104 aa		13.42	□□□□□ -0.26
HOMER3-208	ENST00000595756		K7EIM0	57 aa		13.42	□□□□□ -0.26
HOMER3-208	ENST00000595756	MT-CO2	P00403	227 aa		13.42	□□□□□ -0.26
HOMER3-208	ENST00000595756	CLEC3B	P05452	202 aa		13.42	□□□□□ -0.26
HOMER3-208	ENST00000595756	NPY1R	P25929	384 aa		13.42	□□□□□ -0.26
HOMER3-208	ENST00000595756	FCGR2B	P31994	310 aa	Predicted RBP	13.42	□□□□□ -0.26
HOMER3-208	ENST00000595756	ELL	P55199	621 aa	Predicted RBP	13.42	□□□□□ -0.26
HOMER3-208	ENST00000595756	ID3	Q02535	119 aa		13.42	□□□□□ -0.26
HOMER3-208	ENST00000595756	ETFRF1	Q6IPR1	90 aa		13.42	□□□□□ -0.26
HOMER3-208	ENST00000595756	BTNL8	Q6UX41	500 aa		13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms