RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 CD74P04233 296 aa12.52□□□□□ -0.41
CCDC9-202ENST00000595659 TBPP20226 339 aa12.52□□□□□ -0.41
CCDC9-202ENST00000595659 UCP1P25874 307 aa12.52□□□□□ -0.41
CCDC9-202ENST00000595659 OPRK1P41145 380 aa12.52□□□□□ -0.41
CCDC9-202ENST00000595659 SUB1P53999 127 aaKnown RBP eCLIP12.52□□□□□ -0.41
CCDC9-202ENST00000595659 CMC4P56277 68 aaPredicted RBP12.52□□□□□ -0.41
CCDC9-202ENST00000595659 TAS2R19P59542 299 aa12.52□□□□□ -0.41
CCDC9-202ENST00000595659 DEFB131AP59861 70 aa12.52□□□□□ -0.41
CCDC9-202ENST00000595659 FAM24BQ8N5W8 94 aa12.52□□□□□ -0.41
CCDC9-202ENST00000595659 FNDC4Q9H6D8 234 aaPredicted RBP12.52□□□□□ -0.41
CCDC9-202ENST00000595659 VSIRQ9H7M9 311 aa12.52□□□□□ -0.41
CCDC9-202ENST00000595659 ENY2Q9NPA8 101 aa12.52□□□□□ -0.41
CCDC9-202ENST00000595659 INS-IGF2F8WCM5 200 aa12.51□□□□□ -0.41
CCDC9-202ENST00000595659 OR5AC1P0C628 307 aa12.51□□□□□ -0.41
CCDC9-202ENST00000595659 SPCS2Q15005 226 aa12.51□□□□□ -0.41
CCDC9-202ENST00000595659 PVRIGQ6DKI7 326 aa12.51□□□□□ -0.41
CCDC9-202ENST00000595659 LHFPL5Q8TAF8 219 aa12.51□□□□□ -0.41
CCDC9-202ENST00000595659 RARRES2Q99969 163 aa12.51□□□□□ -0.41
CCDC9-202ENST00000595659 TEX13DA0A0J9YY54 714 aaPredicted RBP12.5□□□□□ -0.41
CCDC9-202ENST00000595659 GABARAPH6UMI1 98 aa12.5□□□□□ -0.41
CCDC9-202ENST00000595659 RTBDNQ9BSG5 229 aaPredicted RBP12.5□□□□□ -0.41
CCDC9-202ENST00000595659 RABAC1Q9UI14 185 aa12.5□□□□□ -0.41
CCDC9-202ENST00000595659 DEFB4AO15263 64 aa12.49□□□□□ -0.41
CCDC9-202ENST00000595659 CLN5O75503 358 aa12.49□□□□□ -0.41
CCDC9-202ENST00000595659 NXPH3O95157 252 aa12.49□□□□□ -0.41
CCDC9-202ENST00000595659 NPPCP23582 126 aa12.49□□□□□ -0.41
CCDC9-202ENST00000595659 TIGITQ495A1 244 aa12.49□□□□□ -0.41
CCDC9-202ENST00000595659 GPR141Q7Z602 305 aa12.49□□□□□ -0.41
CCDC9-202ENST00000595659 TMEM217Q8N7C4 229 aa12.49□□□□□ -0.41
CCDC9-202ENST00000595659 OR11H2Q8NH07 326 aa12.49□□□□□ -0.41
CCDC9-202ENST00000595659 GLYATL2Q8WU03 294 aa12.49□□□□□ -0.41
CCDC9-202ENST00000595659 C15orf40Q8WUR7 153 aa12.49□□□□□ -0.41
CCDC9-202ENST00000595659 PHLDA1Q8WV24 401 aaPredicted RBP12.49□□□□□ -0.41
CCDC9-202ENST00000595659 TMEM230Q96A57 120 aa12.49□□□□□ -0.41
CCDC9-202ENST00000595659 NAA60Q9H7X0 242 aa12.49□□□□□ -0.41
CCDC9-202ENST00000595659 C14orf166Q9Y224 244 aaKnown RBP12.49□□□□□ -0.41
CCDC9-202ENST00000595659 CORTO00230 105 aa12.48□□□□□ -0.41
CCDC9-202ENST00000595659 CDS2O95674 445 aa12.48□□□□□ -0.41
CCDC9-202ENST00000595659 CA1P00915 261 aaPredicted RBP12.48□□□□□ -0.41
CCDC9-202ENST00000595659 SPCS3P61009 180 aa12.48□□□□□ -0.41
CCDC9-202ENST00000595659 MEF2DQ14814 521 aa12.48□□□□□ -0.41
CCDC9-202ENST00000595659 SELENOHQ8IZQ5 122 aaKnown RBP12.48□□□□□ -0.41
CCDC9-202ENST00000595659 STXBP6Q8NFX7 210 aa12.48□□□□□ -0.41
CCDC9-202ENST00000595659 OR4X1Q8NH49 305 aa12.48□□□□□ -0.41
CCDC9-202ENST00000595659 GPR146Q96CH1 333 aa12.48□□□□□ -0.41
CCDC9-202ENST00000595659 METTL26Q96S19 204 aa12.48□□□□□ -0.41
CCDC9-202ENST00000595659 TMEM222Q9H0R3 208 aa12.48□□□□□ -0.41
CCDC9-202ENST00000595659 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.48□□□□□ -0.41
CCDC9-202ENST00000595659 CACNG5Q9UF02 275 aa12.48□□□□□ -0.41
CCDC9-202ENST00000595659 KLK5Q9Y337 293 aaPredicted RBP12.48□□□□□ -0.41
CCDC9-202ENST00000595659 DISC1C4P0D8 188 aa12.47□□□□□ -0.41
CCDC9-202ENST00000595659 IGKV1-17P01599 117 aa12.47□□□□□ -0.41
CCDC9-202ENST00000595659 CD5P06127 495 aa12.47□□□□□ -0.41
CCDC9-202ENST00000595659 ATF4P18848 351 aaPredicted RBP12.47□□□□□ -0.41
CCDC9-202ENST00000595659 ALDH3B2P48448 385 aa12.47□□□□□ -0.41
CCDC9-202ENST00000595659 NANOS2P60321 138 aaKnown RBP12.47□□□□□ -0.41
CCDC9-202ENST00000595659 BSXQ3C1V8 233 aa12.47□□□□□ -0.41
CCDC9-202ENST00000595659 TMEM268Q5VZI3 342 aa12.47□□□□□ -0.41
CCDC9-202ENST00000595659 OR4C16Q8NGL9 310 aa12.47□□□□□ -0.41
CCDC9-202ENST00000595659 GATAD1Q8WUU5 269 aa12.47□□□□□ -0.41
CCDC9-202ENST00000595659 MRPS26Q9BYN8 205 aaKnown RBP12.47□□□□□ -0.41
CCDC9-202ENST00000595659 TMEM231Q9H6L2 316 aa12.47□□□□□ -0.41
CCDC9-202ENST00000595659 HEYLQ9NQ87 328 aaPredicted RBP12.47□□□□□ -0.41
CCDC9-202ENST00000595659 PRR13Q9NZ81 148 aa12.47□□□□□ -0.41
CCDC9-202ENST00000595659 FBXL17Q9UF56 701 aa12.47□□□□□ -0.41
CCDC9-202ENST00000595659 CEBPZOSA8MTT3 80 aa12.46□□□□□ -0.41
CCDC9-202ENST00000595659 RPL5P46777 297 aaKnown RBP12.46□□□□□ -0.41
CCDC9-202ENST00000595659 P2RY1P47900 373 aa12.46□□□□□ -0.41
CCDC9-202ENST00000595659 IL18Q14116 193 aa12.46□□□□□ -0.41
CCDC9-202ENST00000595659 RBMS2Q15434 407 aaKnown RBP12.46□□□□□ -0.41
CCDC9-202ENST00000595659 CLVS1Q8IUQ0 354 aaPredicted RBP12.46□□□□□ -0.41
CCDC9-202ENST00000595659 RBPMSQ93062 196 aaKnown RBP12.46□□□□□ -0.41
CCDC9-202ENST00000595659 DIRAS2Q96HU8 199 aa12.46□□□□□ -0.41
CCDC9-202ENST00000595659 A0A1W2PS18 150 aa12.45□□□□□ -0.42
CCDC9-202ENST00000595659 KNCNA6PVL3 124 aa12.45□□□□□ -0.42
CCDC9-202ENST00000595659 B3GALNT1O75752 331 aa12.45□□□□□ -0.42
CCDC9-202ENST00000595659 AKAIN1P0CW23 69 aa12.45□□□□□ -0.42
CCDC9-202ENST00000595659 CRYBB3P26998 211 aa12.45□□□□□ -0.42
CCDC9-202ENST00000595659 HTR2BP41595 481 aa12.45□□□□□ -0.42
CCDC9-202ENST00000595659 MRPS10P82664 201 aaKnown RBP12.45□□□□□ -0.42
CCDC9-202ENST00000595659 SSBP1Q04837 148 aaKnown RBP12.45□□□□□ -0.42
CCDC9-202ENST00000595659 TMEM187Q14656 261 aa12.45□□□□□ -0.42
CCDC9-202ENST00000595659 FAM219AQ8IW50 185 aa12.45□□□□□ -0.42
CCDC9-202ENST00000595659 STHQ8IWL8 128 aa12.45□□□□□ -0.42
CCDC9-202ENST00000595659 OR51S1Q8NGJ8 323 aa12.45□□□□□ -0.42
CCDC9-202ENST00000595659 SMIM4Q8WVI0 70 aa12.45□□□□□ -0.42
CCDC9-202ENST00000595659 GPR132Q9UNW8 380 aa12.45□□□□□ -0.42
CCDC9-202ENST00000595659 CRYM-AS1A6NIL9 109 aa12.44□□□□□ -0.42
CCDC9-202ENST00000595659 K7EQG2 157 aa12.44□□□□□ -0.42
CCDC9-202ENST00000595659 ZNF688P0C7X2 276 aa12.44□□□□□ -0.42
CCDC9-202ENST00000595659 RND2P52198 227 aa12.44□□□□□ -0.42
CCDC9-202ENST00000595659 DHODHQ02127 395 aa12.44□□□□□ -0.42
CCDC9-202ENST00000595659 AARDQ4LEZ3 155 aa12.44□□□□□ -0.42
CCDC9-202ENST00000595659 PRSS54Q6PEW0 395 aa12.44□□□□□ -0.42
CCDC9-202ENST00000595659 RPP25LQ8N5L8 163 aaKnown RBP12.44□□□□□ -0.42
CCDC9-202ENST00000595659 OR52E5Q8NH55 327 aa12.44□□□□□ -0.42
CCDC9-202ENST00000595659 C11orf45Q8TAV5 145 aa12.44□□□□□ -0.42
CCDC9-202ENST00000595659 TMEM170AQ8WVE7 144 aa12.44□□□□□ -0.42
CCDC9-202ENST00000595659 TRAV2A0A0B4J234 112 aa12.43□□□□□ -0.42
CCDC9-202ENST00000595659 RPS10-NUDT3A0A1W2PQS6 291 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms