RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 GYG2O15488 501 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 ANGPTL7O43827 346 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 DHRS3O75911 302 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 IFNA17P01571 189 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 TRBV12-3P01733 135 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 CPMP14384 443 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 GADD45AP24522 165 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 CMPK1P30085 196 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 SRIP30626 198 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 CD70P32970 193 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 ZNF140P52738 457 aaPredicted RBP3.37□□□□□ -1.87
SMAD4-216ENST00000593223 TAS2R46P59540 309 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 TAS2R30P59541 319 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 PPP3R1P63098 170 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 IFITM3Q01628 133 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 PLCXD2Q0VAA5 305 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 OR8G1Q15617 311 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 C12orf74Q32Q52 190 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 TMEM236Q5W0B7 351 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 Q6ZSR6 202 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 TCF23Q7RTU1 214 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 VN1R4Q7Z5H5 301 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 TMEM86AQ8N2M4 240 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 ANKRD29Q8N6D5 301 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 ACBD7Q8N6N7 88 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 LY6G5BQ8NDX9 201 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 SLC25A44Q96H78 314 aaPredicted RBP3.37□□□□□ -1.87
SMAD4-216ENST00000593223 TMEM101Q96IK0 257 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 LINC00167Q96N53 147 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 ZNF184Q99676 751 aaPredicted RBP3.37□□□□□ -1.87
SMAD4-216ENST00000593223 DEFB127Q9H1M4 99 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 OR52D1Q9H346 318 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 Q9H3A6 140 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 POPDC3Q9HBV1 291 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 TMEM38BQ9NVV0 291 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 CLCF1Q9UBD9 225 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 TRAPPC2LQ9UL33 140 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 KLF13Q9Y2Y9 288 aaPredicted RBP3.37□□□□□ -1.87
SMAD4-216ENST00000593223 SLC25A15Q9Y619 301 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 ENPP4Q9Y6X5 453 aa3.37□□□□□ -1.87
SMAD4-216ENST00000593223 CEP192Q8TEP8 1941 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 TRAV8-1A0A0A6YYK1 113 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 IGHV1-69DA0A0B4J2H0 117 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 RIIAD1A6NNX1 92 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 CD300LBA8K4G0 201 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 INMT-MINDY4F8WBC2 141 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 M0R2Z0 102 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 UPK1AO00322 258 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 FFAR1O14842 300 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 TCF21O43680 179 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 KCNK2O95069 426 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 HLA-DRB1P01911 266 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 SCTP09683 121 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 PSG2P11465 335 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 ELK1P19419 428 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 RPS4Y1P22090 263 aaKnown RBP3.36□□□□□ -1.87
SMAD4-216ENST00000593223 EVX1P49640 407 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 POLR2HP52434 150 aaKnown RBP3.36□□□□□ -1.87
SMAD4-216ENST00000593223 GFERP55789 205 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 CTBP2P56545 445 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 SYNJ2BPP57105 145 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 PKIAP61925 76 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 NCS1P62166 190 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 LOXL1Q08397 574 aaPredicted RBP3.36□□□□□ -1.87
SMAD4-216ENST00000593223 PNOCQ13519 176 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 FZD2Q14332 565 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 KCNJ8Q15842 424 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 PRR4Q16378 134 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 FBXL19-AS1Q494R0 122 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 ZNF404Q494X3 552 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 MESTQ5EB52 335 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 FAM222AQ5U5X8 452 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 KDM4DQ6B0I6 523 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 SBSNQ6UWP8 590 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 Q6ZRU5 148 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 LINC01551Q86U37 167 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 C8orf59Q8N0T1 100 aaPredicted RBP3.36□□□□□ -1.87
SMAD4-216ENST00000593223 ZCCHC24Q8N2G6 241 aaKnown RBP3.36□□□□□ -1.87
SMAD4-216ENST00000593223 DCAF4L2Q8NA75 395 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 TMEM229BQ8NBD8 167 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 OR4E2Q8NGC2 313 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 OR2T4Q8NH00 348 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 TERB2Q8NHR7 220 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 ADAT3Q96EY9 351 aaPredicted RBP3.36□□□□□ -1.87
SMAD4-216ENST00000593223 SPACA5Q96QH8 159 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 TSPAN32Q96QS1 320 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 TMEM147Q9BVK8 224 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 ZNF471Q9BX82 626 aaPredicted RBP3.36□□□□□ -1.87
SMAD4-216ENST00000593223 GABARAPL3Q9BY60 117 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 IFI27L2Q9H2X8 130 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 PTGES2Q9H7Z7 377 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 NAT8BQ9UHF3 227 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 DNAJC12Q9UKB3 198 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 UGT2A1Q9Y4X1 527 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 HEBP2Q9Y5Z4 205 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 CHD5Q8TDI0 1954 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 HYDINQ4G0P3 5121 aa3.36□□□□□ -1.87
SMAD4-216ENST00000593223 MYH4Q9Y623 1939 aa3.35□□□□□ -1.87
SMAD4-216ENST00000593223 hCG_1818297A0A087WSY0 165 aa3.35□□□□□ -1.87
SMAD4-216ENST00000593223 IGHV2-26A0A0B4J1V2 119 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms