RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 OR2Z1Q8NG97 314 aa4.28□□□□□ -1.72
CAPN3-217ENST00000567817 OR13A1Q8NGR1 328 aa4.28□□□□□ -1.72
CAPN3-217ENST00000567817 FAM57AQ8TBR7 257 aa4.28□□□□□ -1.72
CAPN3-217ENST00000567817 Q8WTZ3 238 aa4.28□□□□□ -1.72
CAPN3-217ENST00000567817 ACY3Q96HD9 319 aa4.28□□□□□ -1.72
CAPN3-217ENST00000567817 SMIM7Q9BQ49 75 aa4.28□□□□□ -1.72
CAPN3-217ENST00000567817 PYGO2Q9BRQ0 406 aa4.28□□□□□ -1.72
CAPN3-217ENST00000567817 IFI27L2Q9H2X8 130 aa4.28□□□□□ -1.72
CAPN3-217ENST00000567817 NPVFQ9HCQ7 196 aa4.28□□□□□ -1.72
CAPN3-217ENST00000567817 ENY2Q9NPA8 101 aa4.28□□□□□ -1.72
CAPN3-217ENST00000567817 CLN8Q9UBY8 286 aa4.28□□□□□ -1.72
CAPN3-217ENST00000567817 IL19Q9UHD0 177 aa4.28□□□□□ -1.72
CAPN3-217ENST00000567817 PITPNC1Q9UKF7 332 aa4.28□□□□□ -1.72
CAPN3-217ENST00000567817 PRNDQ9UKY0 176 aa4.28□□□□□ -1.72
CAPN3-217ENST00000567817 PSG11Q9UQ72 335 aa4.28□□□□□ -1.72
CAPN3-217ENST00000567817 ZNF257Q9Y2Q1 563 aa4.28□□□□□ -1.72
CAPN3-217ENST00000567817 MED12Q93074 2177 aa4.28□□□□□ -1.72
CAPN3-217ENST00000567817 CHD3Q12873 2000 aaKnown RBP4.28□□□□□ -1.73
CAPN3-217ENST00000567817 A0A0A0MQY5 61 aa4.27□□□□□ -1.73
CAPN3-217ENST00000567817 TRAV39A0A0B4J263 110 aa4.27□□□□□ -1.73
CAPN3-217ENST00000567817 hADV38S2A0JD32 116 aa4.27□□□□□ -1.73
CAPN3-217ENST00000567817 NKX6-3A6NJ46 265 aa4.27□□□□□ -1.73
CAPN3-217ENST00000567817 PCP4L1A6NKN8 68 aa4.27□□□□□ -1.73
CAPN3-217ENST00000567817 C15orf61A6NNL5 157 aa4.27□□□□□ -1.73
CAPN3-217ENST00000567817 C15orf62A8K5M9 175 aa4.27□□□□□ -1.73
CAPN3-217ENST00000567817 C17orf98A8MV24 154 aa4.27□□□□□ -1.73
CAPN3-217ENST00000567817 INS-IGF2F8WCM5 200 aa4.27□□□□□ -1.73
CAPN3-217ENST00000567817 M0R1X1 148 aa4.27□□□□□ -1.73
CAPN3-217ENST00000567817 FCGR3BO75015 233 aa4.27□□□□□ -1.73
CAPN3-217ENST00000567817 CLN5O75503 358 aa4.27□□□□□ -1.73
CAPN3-217ENST00000567817 CXorf1O96002 111 aa4.27□□□□□ -1.73
CAPN3-217ENST00000567817 IFNA10P01566 189 aa4.27□□□□□ -1.73
CAPN3-217ENST00000567817 TYMSP04818 313 aa4.27□□□□□ -1.73
CAPN3-217ENST00000567817 FABP1P07148 127 aa4.27□□□□□ -1.73
CAPN3-217ENST00000567817 SSTR5P35346 364 aa4.27□□□□□ -1.73
CAPN3-217ENST00000567817 HSPE1P61604 102 aaKnown RBP4.27□□□□□ -1.73
CAPN3-217ENST00000567817 MEF2CQ06413 473 aaPredicted RBP4.27□□□□□ -1.73
CAPN3-217ENST00000567817 EDDM3AQ14507 147 aa4.27□□□□□ -1.73
CAPN3-217ENST00000567817 COA6Q5JTJ3 125 aaKnown RBP4.27□□□□□ -1.73
CAPN3-217ENST00000567817 Q6ZR03 302 aa4.27□□□□□ -1.73
CAPN3-217ENST00000567817 ZNF826PQ6ZT77 177 aa4.27□□□□□ -1.73
CAPN3-217ENST00000567817 SSX9Q7RTT3 188 aa4.27□□□□□ -1.73
CAPN3-217ENST00000567817 CD177Q8N6Q3 437 aa4.27□□□□□ -1.73
CAPN3-217ENST00000567817 C8orf31Q8N9H6 132 aa4.27□□□□□ -1.73
CAPN3-217ENST00000567817 SLC24A4Q8NFF2 622 aa4.27□□□□□ -1.73
CAPN3-217ENST00000567817 OR4F5Q8NH21 305 aa4.27□□□□□ -1.73
CAPN3-217ENST00000567817 OR2V2Q96R30 315 aa4.27□□□□□ -1.73
CAPN3-217ENST00000567817 OR4F4Q96R69 305 aa4.27□□□□□ -1.73
CAPN3-217ENST00000567817 RNF2Q99496 336 aa4.27□□□□□ -1.73
CAPN3-217ENST00000567817 GAL3ST2Q9H3Q3 398 aa4.27□□□□□ -1.73
CAPN3-217ENST00000567817 UFSP2Q9NUQ7 469 aa4.27□□□□□ -1.73
CAPN3-217ENST00000567817 CALYQ9NYX4 217 aa4.27□□□□□ -1.73
CAPN3-217ENST00000567817 FOXA2Q9Y261 457 aaPredicted RBP4.27□□□□□ -1.73
CAPN3-217ENST00000567817 LY96Q9Y6Y9 160 aa4.27□□□□□ -1.73
CAPN3-217ENST00000567817 VPS13CQ709C8 3753 aa4.27□□□□□ -1.73
CAPN3-217ENST00000567817 IGKV1D-17A0A075B6S4 117 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 C17orf100A8MU93 164 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 C11orf94C9JXX5 98 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 WNT9BO14905 357 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 HIST1H2BKO60814 126 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 HIST1H2BJP06899 126 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 CD55P08174 381 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 FBP1P09467 338 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 STAG3L2P0CL84 134 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 STAG3L3P0CL85 134 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 HIST1H2BOP23527 126 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 CEACAM8P31997 349 aaPredicted RBP4.26□□□□□ -1.73
CAPN3-217ENST00000567817 HIST1H2BBP33778 126 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 VDAC2P45880 294 aaPredicted RBP4.26□□□□□ -1.73
CAPN3-217ENST00000567817 GALR1P47211 349 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 RPL29P47914 159 aaKnown RBP4.26□□□□□ -1.73
CAPN3-217ENST00000567817 CEBPDP49716 269 aaPredicted RBP4.26□□□□□ -1.73
CAPN3-217ENST00000567817 FGF8P55075 233 aaPredicted RBP4.26□□□□□ -1.73
CAPN3-217ENST00000567817 HIST1H2BDP58876 126 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 BRWD1-AS2P59051 145 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 RHOBP62745 196 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 HIST1H2BCP62807 126 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 RPL23P62829 140 aaKnown RBP4.26□□□□□ -1.73
CAPN3-217ENST00000567817 ADIRFQ15847 76 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 HIST2H2BEQ16778 126 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 IZUMO4Q1ZYL8 232 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 COX19Q49B96 90 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 OR2B11Q5JQS5 317 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.26□□□□□ -1.73
CAPN3-217ENST00000567817 TEX36Q5VZQ5 186 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 STUMQ69YW2 141 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 Q6ZSV7 163 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 C5orf24Q7Z6I8 188 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 PNKDQ8N490 385 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 OR51G1Q8NGK1 321 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 OR5B3Q8NH48 314 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 OR4A5Q8NH83 315 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 VSTM2AQ8TAG5 236 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 NEUROG1Q92886 237 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 HIST1H2BHQ93079 126 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 RPUSD4Q96CM3 377 aaKnown RBP4.26□□□□□ -1.73
CAPN3-217ENST00000567817 C5orf30Q96GV9 206 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 SLC35E1Q96K37 410 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 UHRF2Q96PU4 802 aa4.26□□□□□ -1.73
CAPN3-217ENST00000567817 PFDN5Q99471 154 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms