RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 A0A1B0GW64 132 aa4.31□□□□□ -1.72
SMG1-211ENST00000565324 DUTP33316 252 aaKnown RBP4.31□□□□□ -1.72
SMG1-211ENST00000565324 RPL32P62910 135 aaKnown RBP4.31□□□□□ -1.72
SMG1-211ENST00000565324 TSKUQ8WUA8 353 aa4.31□□□□□ -1.72
SMG1-211ENST00000565324 IGLV1-36A0A0B4J1U3 117 aa4.31□□□□□ -1.72
SMG1-211ENST00000565324 SNRPCP09234 159 aaKnown RBP4.31□□□□□ -1.72
SMG1-211ENST00000565324 TCRBV4S1A1TA0A5B7 111 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 NTN1O95631 604 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 REG1AP05451 166 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 TMEM167AQ8TBQ9 72 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 RASL10AQ92737 203 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 ZNF48Q96MX3 618 aaPredicted RBP4.3□□□□□ -1.72
SMG1-211ENST00000565324 GTSF1LQ9H1H1 148 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 PILRBQ9UKJ0 227 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 B9A039 149 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 PDLIM4P50479 330 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 HIST3H2BBQ8N257 126 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 PGFP49763 221 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 FAM90A2PQ658T7 463 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 Q6ZT83 130 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 FAM89BQ8N5H3 189 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 FOXD3Q9UJU5 478 aaPredicted RBP4.3□□□□□ -1.72
SMG1-211ENST00000565324 FRMPD3Q5JV73 1810 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 LCTP09848 1927 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 IGHV5-10-1A0A0J9YXX1 117 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 RAMP1O60894 148 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 GZMBP10144 247 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 KIR3DS1Q14943 382 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 TGIF1Q15583 401 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 TRIP6Q15654 476 aaKnown RBP4.3□□□□□ -1.72
SMG1-211ENST00000565324 TMEM240Q5SV17 173 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 SLC25A39Q9BZJ4 359 aaPredicted RBP4.3□□□□□ -1.72
SMG1-211ENST00000565324 MRPL27Q9P0M9 148 aaKnown RBP4.3□□□□□ -1.72
SMG1-211ENST00000565324 IGKV1D-42A0A075B6H8 117 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 C1orf210Q8IVY1 113 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 GATD1Q8NB37 220 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 KLF14Q8TD94 323 aaPredicted RBP4.3□□□□□ -1.72
SMG1-211ENST00000565324 VGLL1Q99990 258 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 PPIAL4CA0A0B4J2A2 164 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 PPIAL4GP0DN37 164 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 RNASE4P34096 147 aaKnown RBP4.3□□□□□ -1.72
SMG1-211ENST00000565324 TIMP3P35625 211 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 ITLN1Q8WWA0 313 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 LHFPL6Q9Y693 200 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 CD7P09564 240 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 EGR4Q05215 589 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 UTF1Q5T230 341 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 CENPVQ7Z7K6 275 aaPredicted RBP4.3□□□□□ -1.72
SMG1-211ENST00000565324 RPRMLQ8N4K4 120 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 ZNF385AQ96PM9 386 aaKnown RBP4.3□□□□□ -1.72
SMG1-211ENST00000565324 ZNF831Q5JPB2 1677 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 DENND4AQ7Z401 1863 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 C1QAP02745 245 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 ACTL10Q5JWF8 245 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 ADAMTSL5Q6ZMM2 481 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 BOD1L2Q8IYS8 172 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 PRR32B1ATL7 298 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 KLF4O43474 513 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 HAPLN4Q86UW8 402 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 BCL6BQ8N143 479 aaPredicted RBP4.3□□□□□ -1.72
SMG1-211ENST00000565324 GTF3AQ92664 365 aaKnown RBP4.3□□□□□ -1.72
SMG1-211ENST00000565324 AGMATQ9BSE5 352 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 FAM60AQ9NP50 221 aa4.3□□□□□ -1.72
SMG1-211ENST00000565324 A0A1W2PPV9 198 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 ADARB2-AS1A8MUL3 147 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 TEX38Q6PEX7 206 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 RFLNBQ8N5W9 214 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 ALPK3Q96L96 1907 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 SPTAN1Q13813 2472 aaKnown RBP4.29□□□□□ -1.72
SMG1-211ENST00000565324 IQCF6A8MYZ5 107 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 CD5LO43866 347 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 MPZP25189 248 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 SFTA2Q6UW10 78 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 RNASE7Q9H1E1 156 aaKnown RBP4.29□□□□□ -1.72
SMG1-211ENST00000565324 ATXN7O15265 892 aaPredicted RBP4.29□□□□□ -1.72
SMG1-211ENST00000565324 NDUFC2O95298 119 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 AMBPP02760 352 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 SELLP14151 372 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 DRD3P35462 400 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 GAGE1Q13065 139 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 GAGE2AQ6NT46 116 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 LIMS2Q7Z4I7 341 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 F8W1H4 67 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 TNFRSF14Q92956 283 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 JMJD8Q96S16 334 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 LY96Q9Y6Y9 160 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 OVOL1O14753 267 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 FGF16O43320 207 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 ZNF525Q8N782 197 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 RNF115Q9Y4L5 304 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 LINC00312Q9Y6C7 94 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 MYMXA0A1B0GTQ4 84 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 CISD3P0C7P0 127 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 ATP5G3P48201 142 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 RNF125Q96EQ8 232 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 MYEOVQ96EZ4 313 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 EML5Q05BV3 1969 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 EP300Q09472 2414 aaPredicted RBP4.29□□□□□ -1.72
SMG1-211ENST00000565324 IGHV3-72A0A0B4J1Y9 119 aa4.29□□□□□ -1.72
SMG1-211ENST00000565324 SRD5A1P18405 259 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms