RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 FKBP11Q9NYL4 201 aa12.3□□□□□ -0.44
HDGFL3-203ENST00000563404 PCLOQ9Y6V0 5065 aa12.29□□□□□ -0.44
HDGFL3-203ENST00000563404 FAT2Q9NYQ8 4349 aa12.29□□□□□ -0.44
HDGFL3-203ENST00000563404 TRAV14DV4A0A0A6YYC5 116 aa12.29□□□□□ -0.44
HDGFL3-203ENST00000563404 RAB3DO95716 219 aa12.29□□□□□ -0.44
HDGFL3-203ENST00000563404 MT-CO2P00403 227 aa12.29□□□□□ -0.44
HDGFL3-203ENST00000563404 APOHP02749 345 aaPredicted RBP12.29□□□□□ -0.44
HDGFL3-203ENST00000563404 FAUP35544 74 aaKnown RBP12.29□□□□□ -0.44
HDGFL3-203ENST00000563404 PRR20EP86478 221 aa12.29□□□□□ -0.44
HDGFL3-203ENST00000563404 PRR20CP86479 221 aa12.29□□□□□ -0.44
HDGFL3-203ENST00000563404 PRR20DP86480 221 aa12.29□□□□□ -0.44
HDGFL3-203ENST00000563404 PRR20BP86481 221 aa12.29□□□□□ -0.44
HDGFL3-203ENST00000563404 PRR20AP86496 221 aa12.29□□□□□ -0.44
HDGFL3-203ENST00000563404 TRIQKQ629K1 86 aa12.29□□□□□ -0.44
HDGFL3-203ENST00000563404 ZNF114Q8NC26 417 aa12.29□□□□□ -0.44
HDGFL3-203ENST00000563404 OR11H2Q8NH07 326 aa12.29□□□□□ -0.44
HDGFL3-203ENST00000563404 TXN2Q99757 166 aa12.29□□□□□ -0.44
HDGFL3-203ENST00000563404 C7orf50Q9BRJ6 194 aaKnown RBP12.29□□□□□ -0.44
HDGFL3-203ENST00000563404 C11orf68Q9H3H3 251 aaKnown RBP12.29□□□□□ -0.44
HDGFL3-203ENST00000563404 KIAA1109Q2LD37 5005 aa12.29□□□□□ -0.44
HDGFL3-203ENST00000563404 DNAH2Q9P225 4427 aa12.28□□□□□ -0.44
HDGFL3-203ENST00000563404 DISC1C4P0D8 188 aa12.28□□□□□ -0.44
HDGFL3-203ENST00000563404 DEFB4AO15263 64 aa12.28□□□□□ -0.44
HDGFL3-203ENST00000563404 IL7P13232 177 aa12.28□□□□□ -0.44
HDGFL3-203ENST00000563404 UCP3P55916 312 aa12.28□□□□□ -0.44
HDGFL3-203ENST00000563404 CMC4P56277 68 aaPredicted RBP12.28□□□□□ -0.44
HDGFL3-203ENST00000563404 TSPAN5P62079 268 aa12.28□□□□□ -0.44
HDGFL3-203ENST00000563404 RNASE12Q5GAN4 147 aaKnown RBP12.28□□□□□ -0.44
HDGFL3-203ENST00000563404 LPCAT3Q6P1A2 487 aa12.28□□□□□ -0.44
HDGFL3-203ENST00000563404 TOMM20LQ6UXN7 152 aa12.28□□□□□ -0.44
HDGFL3-203ENST00000563404 TBC1D26Q86UD7 250 aa12.28□□□□□ -0.44
HDGFL3-203ENST00000563404 TERB2Q8NHR7 220 aa12.28□□□□□ -0.44
HDGFL3-203ENST00000563404 C11orf45Q8TAV5 145 aa12.28□□□□□ -0.44
HDGFL3-203ENST00000563404 ST8SIA2Q92186 375 aa12.28□□□□□ -0.44
HDGFL3-203ENST00000563404 TSC22D3Q99576 134 aa12.28□□□□□ -0.44
HDGFL3-203ENST00000563404 FBXL17Q9UF56 701 aa12.28□□□□□ -0.44
HDGFL3-203ENST00000563404 DNAH17Q9UFH2 4485 aa12.27□□□□□ -0.44
HDGFL3-203ENST00000563404 NAP1L6A6NFF2 107 aa12.27□□□□□ -0.45
HDGFL3-203ENST00000563404 INPP1P49441 399 aa12.27□□□□□ -0.45
HDGFL3-203ENST00000563404 PRCDQ00LT1 54 aa12.27□□□□□ -0.45
HDGFL3-203ENST00000563404 TCF24Q7RTU0 167 aa12.27□□□□□ -0.45
HDGFL3-203ENST00000563404 LHFPL1Q86WI0 220 aa12.27□□□□□ -0.45
HDGFL3-203ENST00000563404 FAM24BQ8N5W8 94 aa12.27□□□□□ -0.45
HDGFL3-203ENST00000563404 PRRT1Q99946 306 aa12.27□□□□□ -0.45
HDGFL3-203ENST00000563404 VSIRQ9H7M9 311 aa12.27□□□□□ -0.45
HDGFL3-203ENST00000563404 FAM212BQ9NTI7 297 aaPredicted RBP12.27□□□□□ -0.45
HDGFL3-203ENST00000563404 M0QYG6 137 aa12.26□□□□□ -0.45
HDGFL3-203ENST00000563404 CA1P00915 261 aaPredicted RBP12.26□□□□□ -0.45
HDGFL3-203ENST00000563404 RBMS2Q15434 407 aaKnown RBP12.26□□□□□ -0.45
HDGFL3-203ENST00000563404 IZUMO4Q1ZYL8 232 aa12.26□□□□□ -0.45
HDGFL3-203ENST00000563404 SPINK9Q5DT21 86 aa12.26□□□□□ -0.45
HDGFL3-203ENST00000563404 LEMD1Q68G75 181 aa12.26□□□□□ -0.45
HDGFL3-203ENST00000563404 OR4C16Q8NGL9 310 aa12.26□□□□□ -0.45
HDGFL3-203ENST00000563404 OR4A16Q8NH70 328 aa12.26□□□□□ -0.45
HDGFL3-203ENST00000563404 MRGPRFQ96AM1 343 aa12.26□□□□□ -0.45
HDGFL3-203ENST00000563404 PINX1Q96BK5 328 aaKnown RBP12.26□□□□□ -0.45
HDGFL3-203ENST00000563404 MS4A6AQ9H2W1 248 aa12.26□□□□□ -0.45
HDGFL3-203ENST00000563404 ZFAND3Q9H8U3 227 aa12.26□□□□□ -0.45
HDGFL3-203ENST00000563404 SCP2D1Q9UJQ7 156 aa12.26□□□□□ -0.45
HDGFL3-203ENST00000563404 IGHV3-66A0A0C4DH42 116 aa12.25□□□□□ -0.45
HDGFL3-203ENST00000563404 CENPXA8MT69 81 aa12.25□□□□□ -0.45
HDGFL3-203ENST00000563404 GNG7O60262 68 aa12.25□□□□□ -0.45
HDGFL3-203ENST00000563404 UPK1BO75841 260 aa12.25□□□□□ -0.45
HDGFL3-203ENST00000563404 DFFBO76075 338 aa12.25□□□□□ -0.45
HDGFL3-203ENST00000563404 HSPE1P61604 102 aaKnown RBP12.25□□□□□ -0.45
HDGFL3-203ENST00000563404 SURF2Q15527 256 aaPredicted RBP12.25□□□□□ -0.45
HDGFL3-203ENST00000563404 H2BFWTQ7Z2G1 175 aa12.25□□□□□ -0.45
HDGFL3-203ENST00000563404 OR4D10Q8NGI6 311 aa12.25□□□□□ -0.45
HDGFL3-203ENST00000563404 MFFQ9GZY8 342 aa12.25□□□□□ -0.45
HDGFL3-203ENST00000563404 A0A1B0GU03 582 aa12.24□□□□□ -0.45
HDGFL3-203ENST00000563404 ST8SIA3O43173 380 aa12.24□□□□□ -0.45
HDGFL3-203ENST00000563404 GIG44P09565 113 aaPredicted RBP12.24□□□□□ -0.45
HDGFL3-203ENST00000563404 DEFB131AP59861 70 aa12.24□□□□□ -0.45
HDGFL3-203ENST00000563404 PAFAH1B2P68402 229 aa12.24□□□□□ -0.45
HDGFL3-203ENST00000563404 ZNF486Q96H40 463 aaPredicted RBP12.24□□□□□ -0.45
HDGFL3-203ENST00000563404 SCGB3A2Q96PL1 93 aa12.24□□□□□ -0.45
HDGFL3-203ENST00000563404 SLC25A21Q9BQT8 299 aaPredicted RBP12.24□□□□□ -0.45
HDGFL3-203ENST00000563404 PUS1Q9Y606 427 aaKnown RBP eCLIP12.24□□□□□ -0.45
HDGFL3-203ENST00000563404 IFNA4P05014 189 aa12.23□□□□□ -0.45
HDGFL3-203ENST00000563404 TMEM187Q14656 261 aa12.23□□□□□ -0.45
HDGFL3-203ENST00000563404 Q8NAQ8 132 aa12.23□□□□□ -0.45
HDGFL3-203ENST00000563404 OR51S1Q8NGJ8 323 aa12.23□□□□□ -0.45
HDGFL3-203ENST00000563404 ZFAND1Q8TCF1 268 aa12.23□□□□□ -0.45
HDGFL3-203ENST00000563404 GINS3Q9BRX5 216 aa12.23□□□□□ -0.45
HDGFL3-203ENST00000563404 PLA2G10O15496 165 aa12.22□□□□□ -0.45
HDGFL3-203ENST00000563404 TMEM50AO95807 157 aa12.22□□□□□ -0.45
HDGFL3-203ENST00000563404 IGKV1-5P01602 117 aa12.22□□□□□ -0.45
HDGFL3-203ENST00000563404 P0C879 139 aa12.22□□□□□ -0.45
HDGFL3-203ENST00000563404 ERHP84090 104 aaKnown RBP12.22□□□□□ -0.45
HDGFL3-203ENST00000563404 PVRIGQ6DKI7 326 aa12.22□□□□□ -0.45
HDGFL3-203ENST00000563404 ZNF600Q6ZNG1 722 aa12.22□□□□□ -0.45
HDGFL3-203ENST00000563404 C2CD4CQ8TF44 421 aa12.22□□□□□ -0.45
HDGFL3-203ENST00000563404 MCUBQ9NWR8 336 aa12.22□□□□□ -0.45
HDGFL3-203ENST00000563404 MRPL36Q9P0J6 103 aaKnown RBP12.22□□□□□ -0.45
HDGFL3-203ENST00000563404 APLNQ9ULZ1 77 aa12.22□□□□□ -0.45
HDGFL3-203ENST00000563404 TRAV2A0A0B4J234 112 aa12.21□□□□□ -0.45
HDGFL3-203ENST00000563404 A0A0B4J293 547 aa12.21□□□□□ -0.45
HDGFL3-203ENST00000563404 DNASE2O00115 360 aaPredicted RBP12.21□□□□□ -0.45
HDGFL3-203ENST00000563404 CD5P06127 495 aa12.21□□□□□ -0.45
HDGFL3-203ENST00000563404 RBMY1A1P0DJD3 496 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms