RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 RPS10-NUDT3A0A1W2PQS6 291 aa9.04□□□□□ -0.96
SPG11-219ENST00000559822 DISC1C4P0D8 188 aa9.04□□□□□ -0.96
SPG11-219ENST00000559822 RGS5O15539 181 aa9.04□□□□□ -0.96
SPG11-219ENST00000559822 TMEM50AO95807 157 aa9.04□□□□□ -0.96
SPG11-219ENST00000559822 LY6G6CO95867 125 aa9.04□□□□□ -0.96
SPG11-219ENST00000559822 RNASE2P10153 161 aaKnown RBP9.04□□□□□ -0.96
SPG11-219ENST00000559822 ETV6P41212 452 aa9.04□□□□□ -0.96
SPG11-219ENST00000559822 RPL5P46777 297 aaKnown RBP9.04□□□□□ -0.96
SPG11-219ENST00000559822 SPCS3P61009 180 aa9.04□□□□□ -0.96
SPG11-219ENST00000559822 RPL11P62913 178 aaKnown RBP9.04□□□□□ -0.96
SPG11-219ENST00000559822 SURF2Q15527 256 aaPredicted RBP9.04□□□□□ -0.96
SPG11-219ENST00000559822 OR52E5Q8NH55 327 aa9.04□□□□□ -0.96
SPG11-219ENST00000559822 ST8SIA2Q92186 375 aa9.04□□□□□ -0.96
SPG11-219ENST00000559822 METTL26Q96S19 204 aa9.04□□□□□ -0.96
SPG11-219ENST00000559822 NAA50Q9GZZ1 169 aaKnown RBP9.04□□□□□ -0.96
SPG11-219ENST00000559822 ZFAND3Q9H8U3 227 aa9.04□□□□□ -0.96
SPG11-219ENST00000559822 CACFD1Q9UGQ2 172 aa9.04□□□□□ -0.96
SPG11-219ENST00000559822 CLN5O75503 358 aa9.03□□□□□ -0.96
SPG11-219ENST00000559822 CDS2O95674 445 aa9.03□□□□□ -0.96
SPG11-219ENST00000559822 SMIM18P0DKX4 95 aa9.03□□□□□ -0.96
SPG11-219ENST00000559822 NPPCP23582 126 aa9.03□□□□□ -0.96
SPG11-219ENST00000559822 HTR2BP41595 481 aa9.03□□□□□ -0.96
SPG11-219ENST00000559822 DHODHQ02127 395 aa9.03□□□□□ -0.96
SPG11-219ENST00000559822 SP6Q3SY56 376 aa9.03□□□□□ -0.96
SPG11-219ENST00000559822 GPR141Q7Z602 305 aa9.03□□□□□ -0.96
SPG11-219ENST00000559822 OR4D10Q8NGI6 311 aa9.03□□□□□ -0.96
SPG11-219ENST00000559822 OR4X1Q8NH49 305 aa9.03□□□□□ -0.96
SPG11-219ENST00000559822 MARCH1Q8TCQ1 289 aa9.03□□□□□ -0.96
SPG11-219ENST00000559822 TMEM230Q96A57 120 aa9.03□□□□□ -0.96
SPG11-219ENST00000559822 GRAMD2BQ96HH9 432 aa9.03□□□□□ -0.96
SPG11-219ENST00000559822 RARRES2Q99969 163 aa9.03□□□□□ -0.96
SPG11-219ENST00000559822 MFFQ9GZY8 342 aa9.03□□□□□ -0.96
SPG11-219ENST00000559822 TMEM222Q9H0R3 208 aa9.03□□□□□ -0.96
SPG11-219ENST00000559822 MS4A6AQ9H2W1 248 aa9.03□□□□□ -0.96
SPG11-219ENST00000559822 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.03□□□□□ -0.96
SPG11-219ENST00000559822 TEX13DA0A0J9YY54 714 aaPredicted RBP9.02□□□□□ -0.97
SPG11-219ENST00000559822 CA1P00915 261 aaPredicted RBP9.02□□□□□ -0.97
SPG11-219ENST00000559822 OR5AC1P0C628 307 aa9.02□□□□□ -0.97
SPG11-219ENST00000559822 EIF2B2P49770 351 aaKnown RBP9.02□□□□□ -0.97
SPG11-219ENST00000559822 EWSR1Q01844 656 aaKnown RBP eCLIP9.02□□□□□ -0.97
SPG11-219ENST00000559822 ZNF124Q15973 351 aa9.02□□□□□ -0.97
SPG11-219ENST00000559822 BSXQ3C1V8 233 aa9.02□□□□□ -0.97
SPG11-219ENST00000559822 AARDQ4LEZ3 155 aa9.02□□□□□ -0.97
SPG11-219ENST00000559822 SMIM4Q8WVI0 70 aa9.02□□□□□ -0.97
SPG11-219ENST00000559822 RBPMSQ93062 196 aaKnown RBP9.02□□□□□ -0.97
SPG11-219ENST00000559822 MRPS26Q9BYN8 205 aaKnown RBP9.02□□□□□ -0.97
SPG11-219ENST00000559822 C11orf68Q9H3H3 251 aaKnown RBP9.02□□□□□ -0.97
SPG11-219ENST00000559822 NAA60Q9H7X0 242 aa9.02□□□□□ -0.97
SPG11-219ENST00000559822 HEYLQ9NQ87 328 aaPredicted RBP9.02□□□□□ -0.97
SPG11-219ENST00000559822 RABAC1Q9UI14 185 aa9.02□□□□□ -0.97
SPG11-219ENST00000559822 IGHV3-66A0A0C4DH42 116 aa9.01□□□□□ -0.97
SPG11-219ENST00000559822 A0A0G2JRQ6 117 aa9.01□□□□□ -0.97
SPG11-219ENST00000559822 A0A1B0GU03 582 aa9.01□□□□□ -0.97
SPG11-219ENST00000559822 APOHP02749 345 aaPredicted RBP9.01□□□□□ -0.97
SPG11-219ENST00000559822 AKAIN1P0CW23 69 aa9.01□□□□□ -0.97
SPG11-219ENST00000559822 SLC25A4P12235 298 aa9.01□□□□□ -0.97
SPG11-219ENST00000559822 CRYBB3P26998 211 aa9.01□□□□□ -0.97
SPG11-219ENST00000559822 DEFB131AP59861 70 aa9.01□□□□□ -0.97
SPG11-219ENST00000559822 TMEM187Q14656 261 aa9.01□□□□□ -0.97
SPG11-219ENST00000559822 TMEM41BQ5BJD5 291 aa9.01□□□□□ -0.97
SPG11-219ENST00000559822 NOXA1Q86UR1 476 aa9.01□□□□□ -0.97
SPG11-219ENST00000559822 STHQ8IWL8 128 aa9.01□□□□□ -0.97
SPG11-219ENST00000559822 OR1S2Q8NGQ3 325 aa9.01□□□□□ -0.97
SPG11-219ENST00000559822 OR11H2Q8NH07 326 aa9.01□□□□□ -0.97
SPG11-219ENST00000559822 RNASEH2CQ8TDP1 164 aaKnown RBP9.01□□□□□ -0.97
SPG11-219ENST00000559822 GLYATL2Q8WU03 294 aa9.01□□□□□ -0.97
SPG11-219ENST00000559822 PHLDA1Q8WV24 401 aaPredicted RBP9.01□□□□□ -0.97
SPG11-219ENST00000559822 PRRT1Q99946 306 aa9.01□□□□□ -0.97
SPG11-219ENST00000559822 MIXL1Q9H2W2 232 aa9.01□□□□□ -0.97
SPG11-219ENST00000559822 FNDC4Q9H6D8 234 aaPredicted RBP9.01□□□□□ -0.97
SPG11-219ENST00000559822 HELTA6NFD8 242 aa9□□□□□ -0.97
SPG11-219ENST00000559822 CTDSPLO15194 276 aa9□□□□□ -0.97
SPG11-219ENST00000559822 IFNA4P05014 189 aa9□□□□□ -0.97
SPG11-219ENST00000559822 P2RY1P47900 373 aa9□□□□□ -0.97
SPG11-219ENST00000559822 IL18Q14116 193 aa9□□□□□ -0.97
SPG11-219ENST00000559822 C2orf83Q53S99 150 aa9□□□□□ -0.97
SPG11-219ENST00000559822 TMEM268Q5VZI3 342 aa9□□□□□ -0.97
SPG11-219ENST00000559822 LEMD1Q68G75 181 aa9□□□□□ -0.97
SPG11-219ENST00000559822 ETFRF1Q6IPR1 90 aa9□□□□□ -0.97
SPG11-219ENST00000559822 STXBP6Q8NFX7 210 aa9□□□□□ -0.97
SPG11-219ENST00000559822 C11orf45Q8TAV5 145 aa9□□□□□ -0.97
SPG11-219ENST00000559822 DIRAS2Q96HU8 199 aa9□□□□□ -0.97
SPG11-219ENST00000559822 SCGB3A2Q96PL1 93 aa9□□□□□ -0.97
SPG11-219ENST00000559822 RTBDNQ9BSG5 229 aaPredicted RBP9□□□□□ -0.97
SPG11-219ENST00000559822 CACNG5Q9UF02 275 aa9□□□□□ -0.97
SPG11-219ENST00000559822 KCNIP3Q9Y2W7 256 aa9□□□□□ -0.97
SPG11-219ENST00000559822 ALMS1Q8TCU4 4167 aa8.99□□□□□ -0.97
SPG11-219ENST00000559822 CRYM-AS1A6NIL9 109 aa8.99□□□□□ -0.97
SPG11-219ENST00000559822 CEBPZOSA8MTT3 80 aa8.99□□□□□ -0.97
SPG11-219ENST00000559822 CTDSP2O14595 271 aa8.99□□□□□ -0.97
SPG11-219ENST00000559822 IGKV1-17P01599 117 aa8.99□□□□□ -0.97
SPG11-219ENST00000559822 AP2S1P53680 142 aaPredicted RBP8.99□□□□□ -0.97
SPG11-219ENST00000559822 RBMS2Q15434 407 aaKnown RBP8.99□□□□□ -0.97
SPG11-219ENST00000559822 FAAP20Q6NZ36 180 aa8.99□□□□□ -0.97
SPG11-219ENST00000559822 MORN3Q6PF18 240 aaPredicted RBP8.99□□□□□ -0.97
SPG11-219ENST00000559822 Q6ZRM9 215 aa8.99□□□□□ -0.97
SPG11-219ENST00000559822 SELENOHQ8IZQ5 122 aaKnown RBP8.99□□□□□ -0.97
SPG11-219ENST00000559822 LILRB2Q8N423 598 aa8.99□□□□□ -0.97
SPG11-219ENST00000559822 SLC24A4Q8NFF2 622 aa8.99□□□□□ -0.97
SPG11-219ENST00000559822 OR4C16Q8NGL9 310 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms