RNA–Protein interactions for RNA: ENST00000558952.1

CRNDE-205, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 4

Gene CRNDE, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-205ENST00000558952 IL22RA2Q969J5 263 aa16.04■□□□□ 0.16
CRNDE-205ENST00000558952 GPR146Q96CH1 333 aa16.04■□□□□ 0.16
CRNDE-205ENST00000558952 GALNT14Q96FL9 552 aa16.04■□□□□ 0.16
CRNDE-205ENST00000558952 FAM110AQ9BQ89 295 aa16.04■□□□□ 0.16
CRNDE-205ENST00000558952 HEYLQ9NQ87 328 aaPredicted RBP16.04■□□□□ 0.16
CRNDE-205ENST00000558952 CACFD1Q9UGQ2 172 aa16.04■□□□□ 0.16
CRNDE-205ENST00000558952 UBQLN2Q9UHD9 624 aa16.04■□□□□ 0.16
CRNDE-205ENST00000558952 CEBPZOSA8MTT3 80 aa16.03■□□□□ 0.16
CRNDE-205ENST00000558952 CHEK1O14757 476 aa16.03■□□□□ 0.16
CRNDE-205ENST00000558952 ANXA3P12429 323 aa16.03■□□□□ 0.16
CRNDE-205ENST00000558952 ZNF600Q6ZNG1 722 aa16.03■□□□□ 0.16
CRNDE-205ENST00000558952 TOMM5Q8N4H5 51 aa16.03■□□□□ 0.16
CRNDE-205ENST00000558952 IGHV3-49A0A0A0MS15 119 aa16.02■□□□□ 0.16
CRNDE-205ENST00000558952 RPS10-NUDT3A0A1W2PQS6 291 aa16.02■□□□□ 0.16
CRNDE-205ENST00000558952 TMEM187Q14656 261 aa16.02■□□□□ 0.16
CRNDE-205ENST00000558952 TOMM20LQ6UXN7 152 aa16.02■□□□□ 0.16
CRNDE-205ENST00000558952 TMEM230Q96A57 120 aa16.02■□□□□ 0.16
CRNDE-205ENST00000558952 ZNF414Q96IQ9 312 aa16.02■□□□□ 0.16
CRNDE-205ENST00000558952 RNF2Q99496 336 aa16.02■□□□□ 0.16
CRNDE-205ENST00000558952 TMEM50AO95807 157 aa16.01■□□□□ 0.15
CRNDE-205ENST00000558952 SULT1A3P0DMM9 295 aa16.01■□□□□ 0.15
CRNDE-205ENST00000558952 SULT1A4P0DMN0 295 aa16.01■□□□□ 0.15
CRNDE-205ENST00000558952 SRPXP78539 464 aa16.01■□□□□ 0.15
CRNDE-205ENST00000558952 KLF9Q13886 244 aaPredicted RBP16.01■□□□□ 0.15
CRNDE-205ENST00000558952 BSXQ3C1V8 233 aa16.01■□□□□ 0.15
CRNDE-205ENST00000558952 ZFAND6Q6FIF0 208 aa16.01■□□□□ 0.15
CRNDE-205ENST00000558952 PUS1Q9Y606 427 aaKnown RBP eCLIP16.01■□□□□ 0.15
CRNDE-205ENST00000558952 V9GYH0 126 aa16.01■□□□□ 0.15
CRNDE-205ENST00000558952 PIGBOS1A0A0B4J2F0 54 aa16■□□□□ 0.15
CRNDE-205ENST00000558952 CLN5O75503 358 aa16■□□□□ 0.15
CRNDE-205ENST00000558952 CD5P06127 495 aa16■□□□□ 0.15
CRNDE-205ENST00000558952 SLC24A4Q8NFF2 622 aa16■□□□□ 0.15
CRNDE-205ENST00000558952 OR4X1Q8NH49 305 aa16■□□□□ 0.15
CRNDE-205ENST00000558952 TRIM63Q969Q1 353 aa16■□□□□ 0.15
CRNDE-205ENST00000558952 FNDC4Q9H6D8 234 aaPredicted RBP16■□□□□ 0.15
CRNDE-205ENST00000558952 PRR13Q9NZ81 148 aa16■□□□□ 0.15
CRNDE-205ENST00000558952 IGHV3OR16-13A0A075B7E8 117 aa15.99■□□□□ 0.15
CRNDE-205ENST00000558952 IGHV3-74A0A0B4J1X5 117 aa15.99■□□□□ 0.15
CRNDE-205ENST00000558952 NXPH3O95157 252 aa15.99■□□□□ 0.15
CRNDE-205ENST00000558952 APOC4P55056 127 aa15.99■□□□□ 0.15
CRNDE-205ENST00000558952 TMED4Q7Z7H5 227 aa15.99■□□□□ 0.15
CRNDE-205ENST00000558952 LGI3Q8N145 548 aa15.99■□□□□ 0.15
CRNDE-205ENST00000558952 RBM38Q9H0Z9 239 aaKnown RBP15.99■□□□□ 0.15
CRNDE-205ENST00000558952 IGKV3-7A0A075B6H7 116 aa15.98■□□□□ 0.15
CRNDE-205ENST00000558952 TRAV30A0A087WSZ9 112 aa15.98■□□□□ 0.15
CRNDE-205ENST00000558952 A0A0B4J2A0 478 aa15.98■□□□□ 0.15
CRNDE-205ENST00000558952 ZNF701M0R085 212 aaPredicted RBP15.98■□□□□ 0.15
CRNDE-205ENST00000558952 TFPI2P48307 235 aa15.98■□□□□ 0.15
CRNDE-205ENST00000558952 CCR6P51684 374 aa15.98■□□□□ 0.15
CRNDE-205ENST00000558952 CMC4P56277 68 aaPredicted RBP15.98■□□□□ 0.15
CRNDE-205ENST00000558952 SUPT4H1P63272 117 aaKnown RBP15.98■□□□□ 0.15
CRNDE-205ENST00000558952 PAFAH1B2P68402 229 aa15.98■□□□□ 0.15
CRNDE-205ENST00000558952 MLANAQ16655 118 aa15.98■□□□□ 0.15
CRNDE-205ENST00000558952 ODF3L2Q3SX64 289 aa15.98■□□□□ 0.15
CRNDE-205ENST00000558952 C2orf83Q53S99 150 aa15.98■□□□□ 0.15
CRNDE-205ENST00000558952 NOXA1Q86UR1 476 aa15.98■□□□□ 0.15
CRNDE-205ENST00000558952 IL17DQ8TAD2 202 aa15.98■□□□□ 0.15
CRNDE-205ENST00000558952 RNASEH2CQ8TDP1 164 aaKnown RBP15.98■□□□□ 0.15
CRNDE-205ENST00000558952 DEDD2Q8WXF8 326 aa15.98■□□□□ 0.15
CRNDE-205ENST00000558952 TMEM231Q9H6L2 316 aa15.98■□□□□ 0.15
CRNDE-205ENST00000558952 ZFAND3Q9H8U3 227 aa15.98■□□□□ 0.15
CRNDE-205ENST00000558952 SHPKQ9UHJ6 478 aa15.98■□□□□ 0.15
CRNDE-205ENST00000558952 SMCO1Q147U7 214 aa15.97■□□□□ 0.15
CRNDE-205ENST00000558952 ZNF79Q15937 498 aa15.97■□□□□ 0.15
CRNDE-205ENST00000558952 SPANXN2Q5MJ10 180 aa15.97■□□□□ 0.15
CRNDE-205ENST00000558952 TCF24Q7RTU0 167 aa15.97■□□□□ 0.15
CRNDE-205ENST00000558952 LYZL2Q7Z4W2 148 aa15.97■□□□□ 0.15
CRNDE-205ENST00000558952 CCDC190Q86UF4 302 aa15.97■□□□□ 0.15
CRNDE-205ENST00000558952 MRPL36Q9P0J6 103 aaKnown RBP15.97■□□□□ 0.15
CRNDE-205ENST00000558952 A0A1B0GU03 582 aa15.96■□□□□ 0.15
CRNDE-205ENST00000558952 SLC25A4P12235 298 aa15.96■□□□□ 0.15
CRNDE-205ENST00000558952 NPPCP23582 126 aa15.96■□□□□ 0.15
CRNDE-205ENST00000558952 NPY1RP25929 384 aa15.96■□□□□ 0.15
CRNDE-205ENST00000558952 TMEM128Q5BJH2 165 aa15.96■□□□□ 0.15
CRNDE-205ENST00000558952 NMSQ5H8A3 153 aa15.96■□□□□ 0.15
CRNDE-205ENST00000558952 ETFRF1Q6IPR1 90 aa15.96■□□□□ 0.15
CRNDE-205ENST00000558952 ST8SIA2Q92186 375 aa15.96■□□□□ 0.15
CRNDE-205ENST00000558952 METTL26Q96S19 204 aa15.96■□□□□ 0.15
CRNDE-205ENST00000558952 SLC25A21Q9BQT8 299 aaPredicted RBP15.96■□□□□ 0.15
CRNDE-205ENST00000558952 VSIRQ9H7M9 311 aa15.96■□□□□ 0.15
CRNDE-205ENST00000558952 DNAH7Q8WXX0 4024 aa15.96■□□□□ 0.15
CRNDE-205ENST00000558952 A0A1W2PS18 150 aa15.95■□□□□ 0.14
CRNDE-205ENST00000558952 IFNA10P01566 189 aa15.95■□□□□ 0.14
CRNDE-205ENST00000558952 VAMP1P23763 118 aa15.95■□□□□ 0.14
CRNDE-205ENST00000558952 RPL11P62913 178 aaKnown RBP15.95■□□□□ 0.14
CRNDE-205ENST00000558952 TNFRSF9Q07011 255 aa15.95■□□□□ 0.14
CRNDE-205ENST00000558952 FAM90A2PQ658T7 463 aa15.95■□□□□ 0.14
CRNDE-205ENST00000558952 GBGT1Q8N5D6 347 aa15.95■□□□□ 0.14
CRNDE-205ENST00000558952 NARS2Q96I59 477 aaKnown RBP15.95■□□□□ 0.14
CRNDE-205ENST00000558952 IGHV3-66A0A0C4DH42 116 aa15.94■□□□□ 0.14
CRNDE-205ENST00000558952 DNASE2O00115 360 aaPredicted RBP15.94■□□□□ 0.14
CRNDE-205ENST00000558952 UBE2CO00762 179 aa15.94■□□□□ 0.14
CRNDE-205ENST00000558952 APOHP02749 345 aaPredicted RBP15.94■□□□□ 0.14
CRNDE-205ENST00000558952 INPP1P49441 399 aa15.94■□□□□ 0.14
CRNDE-205ENST00000558952 RND2P52198 227 aa15.94■□□□□ 0.14
CRNDE-205ENST00000558952 TIGITQ495A1 244 aa15.94■□□□□ 0.14
CRNDE-205ENST00000558952 STPG3Q8N7X2 389 aa15.94■□□□□ 0.14
CRNDE-205ENST00000558952 OR1S2Q8NGQ3 325 aa15.94■□□□□ 0.14
CRNDE-205ENST00000558952 OR1S1Q8NH92 325 aa15.94■□□□□ 0.14
CRNDE-205ENST00000558952 DTD1Q8TEA8 209 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms