RNA–Protein interactions for RNA: ENST00000557269.5

SHMT2-227, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-227ENST00000557269 ARL16Q0P5N6 197 aa9.86□□□□□ -0.83
SHMT2-227ENST00000557269 ZNF414Q96IQ9 312 aa9.86□□□□□ -0.83
SHMT2-227ENST00000557269 ANK2Q01484 3957 aa9.85□□□□□ -0.83
SHMT2-227ENST00000557269 IGSF23A1L1A6 192 aa9.85□□□□□ -0.83
SHMT2-227ENST00000557269 OR2T8A6NH00 312 aa9.85□□□□□ -0.83
SHMT2-227ENST00000557269 M0QZ24 198 aa9.85□□□□□ -0.83
SHMT2-227ENST00000557269 CORTO00230 105 aa9.85□□□□□ -0.83
SHMT2-227ENST00000557269 LY86O95711 162 aa9.85□□□□□ -0.83
SHMT2-227ENST00000557269 GIPP09681 153 aaPredicted RBP9.85□□□□□ -0.83
SHMT2-227ENST00000557269 SLURP1P55000 103 aa9.85□□□□□ -0.83
SHMT2-227ENST00000557269 RAB11AP62491 216 aa9.85□□□□□ -0.83
SHMT2-227ENST00000557269 RPP30P78346 268 aaKnown RBP9.85□□□□□ -0.83
SHMT2-227ENST00000557269 CD69Q07108 199 aa9.85□□□□□ -0.83
SHMT2-227ENST00000557269 FHL3Q13643 280 aa9.85□□□□□ -0.83
SHMT2-227ENST00000557269 Q56UQ5 140 aa9.85□□□□□ -0.83
SHMT2-227ENST00000557269 ACSM6Q6P461 480 aa9.85□□□□□ -0.83
SHMT2-227ENST00000557269 PRSS54Q6PEW0 395 aa9.85□□□□□ -0.83
SHMT2-227ENST00000557269 NOXA1Q86UR1 476 aa9.85□□□□□ -0.83
SHMT2-227ENST00000557269 UBAC2Q8NBM4 344 aa9.85□□□□□ -0.83
SHMT2-227ENST00000557269 OR4F17Q8NGA8 305 aa9.85□□□□□ -0.83
SHMT2-227ENST00000557269 OR4F4Q96R69 305 aa9.85□□□□□ -0.83
SHMT2-227ENST00000557269 CHRDL1Q9BU40 450 aa9.85□□□□□ -0.83
SHMT2-227ENST00000557269 LINC01619G3V211 115 aa9.84□□□□□ -0.83
SHMT2-227ENST00000557269 G3V3Q6 166 aa9.84□□□□□ -0.83
SHMT2-227ENST00000557269 OR2C1O95371 312 aa9.84□□□□□ -0.83
SHMT2-227ENST00000557269 CTSGP08311 255 aa9.84□□□□□ -0.83
SHMT2-227ENST00000557269 PVALBP20472 110 aaPredicted RBP9.84□□□□□ -0.83
SHMT2-227ENST00000557269 HOXD3P31249 432 aaPredicted RBP9.84□□□□□ -0.83
SHMT2-227ENST00000557269 ADMP35318 185 aa9.84□□□□□ -0.83
SHMT2-227ENST00000557269 ARL3P36405 182 aa9.84□□□□□ -0.83
SHMT2-227ENST00000557269 MYCNOSP40205 109 aa9.84□□□□□ -0.83
SHMT2-227ENST00000557269 BCAP31P51572 246 aa9.84□□□□□ -0.83
SHMT2-227ENST00000557269 CAV2P51636 162 aa9.84□□□□□ -0.83
SHMT2-227ENST00000557269 MFAP4P55083 255 aa9.84□□□□□ -0.83
SHMT2-227ENST00000557269 ZNF616Q08AN1 781 aa9.84□□□□□ -0.83
SHMT2-227ENST00000557269 OR8G2PQ6IF36 304 aa9.84□□□□□ -0.83
SHMT2-227ENST00000557269 SLC16A13Q7RTY0 426 aa9.84□□□□□ -0.83
SHMT2-227ENST00000557269 TMEM252Q8N6L7 170 aa9.84□□□□□ -0.83
SHMT2-227ENST00000557269 LINC00482Q8N8I6 264 aa9.84□□□□□ -0.83
SHMT2-227ENST00000557269 BSCL2Q96G97 398 aaPredicted RBP9.84□□□□□ -0.83
SHMT2-227ENST00000557269 RANGRFQ9HD47 186 aaPredicted RBP9.84□□□□□ -0.83
SHMT2-227ENST00000557269 LYRM2Q9NU23 88 aaPredicted RBP9.84□□□□□ -0.83
SHMT2-227ENST00000557269 MBD2Q9UBB5 411 aa9.84□□□□□ -0.83
SHMT2-227ENST00000557269 IGHV3-35A0A0C4DH35 117 aa9.83□□□□□ -0.84
SHMT2-227ENST00000557269 E5RGE8 158 aa9.83□□□□□ -0.84
SHMT2-227ENST00000557269 SMLR1H3BR10 107 aa9.83□□□□□ -0.84
SHMT2-227ENST00000557269 CST7O76096 145 aa9.83□□□□□ -0.84
SHMT2-227ENST00000557269 RLN2P04090 185 aa9.83□□□□□ -0.84
SHMT2-227ENST00000557269 LYL1P12980 280 aa9.83□□□□□ -0.84
SHMT2-227ENST00000557269 FCGR2BP31994 310 aaPredicted RBP9.83□□□□□ -0.84
SHMT2-227ENST00000557269 GPX4P36969 197 aaPredicted RBP9.83□□□□□ -0.84
SHMT2-227ENST00000557269 RND2P52198 227 aa9.83□□□□□ -0.84
SHMT2-227ENST00000557269 RAP2BP61225 183 aa9.83□□□□□ -0.84
SHMT2-227ENST00000557269 GAMTQ14353 236 aa9.83□□□□□ -0.84
SHMT2-227ENST00000557269 OR4X1Q8NH49 305 aa9.83□□□□□ -0.84
SHMT2-227ENST00000557269 NPIPB3Q92617 1050 aa9.83□□□□□ -0.84
SHMT2-227ENST00000557269 DPF1Q92782 380 aa9.83□□□□□ -0.84
SHMT2-227ENST00000557269 DLX4Q92988 240 aaPredicted RBP9.83□□□□□ -0.84
SHMT2-227ENST00000557269 ACY3Q96HD9 319 aa9.83□□□□□ -0.84
SHMT2-227ENST00000557269 TXN2Q99757 166 aa9.83□□□□□ -0.84
SHMT2-227ENST00000557269 RPS10-NUDT3A0A1W2PQS6 291 aa9.82□□□□□ -0.84
SHMT2-227ENST00000557269 TGOLN2O43493 480 aa9.82□□□□□ -0.84
SHMT2-227ENST00000557269 GGCTO75223 188 aaKnown RBP9.82□□□□□ -0.84
SHMT2-227ENST00000557269 CLN5O75503 358 aa9.82□□□□□ -0.84
SHMT2-227ENST00000557269 PF4P02776 101 aa9.82□□□□□ -0.84
SHMT2-227ENST00000557269 SLC25A4P12235 298 aa9.82□□□□□ -0.84
SHMT2-227ENST00000557269 P2RY1P47900 373 aa9.82□□□□□ -0.84
SHMT2-227ENST00000557269 NHLH2Q02577 135 aa9.82□□□□□ -0.84
SHMT2-227ENST00000557269 ACOT7LQ6ZUV0 252 aa9.82□□□□□ -0.84
SHMT2-227ENST00000557269 TMEM116Q8NCL8 245 aa9.82□□□□□ -0.84
SHMT2-227ENST00000557269 OR2T35Q8NGX2 323 aa9.82□□□□□ -0.84
SHMT2-227ENST00000557269 CACNG8Q8WXS5 425 aa9.82□□□□□ -0.84
SHMT2-227ENST00000557269 DCUN1D4Q92564 292 aa9.82□□□□□ -0.84
SHMT2-227ENST00000557269 VWFP04275 2813 aa9.82□□□□□ -0.84
SHMT2-227ENST00000557269 DNHD1Q96M86 4753 aa9.82□□□□□ -0.84
SHMT2-227ENST00000557269 IGKV1D-37A0A075B6S9 117 aa9.81□□□□□ -0.84
SHMT2-227ENST00000557269 GNG7O60262 68 aa9.81□□□□□ -0.84
SHMT2-227ENST00000557269 IGKV1-17P01599 117 aa9.81□□□□□ -0.84
SHMT2-227ENST00000557269 NPBWR1P48145 328 aa9.81□□□□□ -0.84
SHMT2-227ENST00000557269 SULT1A1P50225 295 aa9.81□□□□□ -0.84
SHMT2-227ENST00000557269 EWSR1Q01844 656 aaKnown RBP eCLIP9.81□□□□□ -0.84
SHMT2-227ENST00000557269 KLF5Q13887 457 aaPredicted RBP9.81□□□□□ -0.84
SHMT2-227ENST00000557269 TIGITQ495A1 244 aa9.81□□□□□ -0.84
SHMT2-227ENST00000557269 ETFRF1Q6IPR1 90 aa9.81□□□□□ -0.84
SHMT2-227ENST00000557269 TMEM217Q8N7C4 229 aa9.81□□□□□ -0.84
SHMT2-227ENST00000557269 OR10P1Q8NGE3 313 aa9.81□□□□□ -0.84
SHMT2-227ENST00000557269 ASB13Q8WXK3 278 aa9.81□□□□□ -0.84
SHMT2-227ENST00000557269 ST6GAL2Q96JF0 529 aa9.81□□□□□ -0.84
SHMT2-227ENST00000557269 ATP6V0BQ99437 205 aa9.81□□□□□ -0.84
SHMT2-227ENST00000557269 IGKV1OR2-108A0A075B7D4 117 aa9.8□□□□□ -0.84
SHMT2-227ENST00000557269 IGLC1P0CG04 106 aa9.8□□□□□ -0.84
SHMT2-227ENST00000557269 PET100P0DJ07 73 aa9.8□□□□□ -0.84
SHMT2-227ENST00000557269 ZP3P21754 424 aa9.8□□□□□ -0.84
SHMT2-227ENST00000557269 SYNJ2BPP57105 145 aa9.8□□□□□ -0.84
SHMT2-227ENST00000557269 DLK1P80370 383 aa9.8□□□□□ -0.84
SHMT2-227ENST00000557269 RPEL1Q2QD12 228 aa9.8□□□□□ -0.84
SHMT2-227ENST00000557269 FAM209BQ5JX69 171 aa9.8□□□□□ -0.84
SHMT2-227ENST00000557269 PRR31Q5SQ13 230 aa9.8□□□□□ -0.84
SHMT2-227ENST00000557269 SPSB3Q6PJ21 355 aa9.8□□□□□ -0.84
SHMT2-227ENST00000557269 UNQ9165/PRO28630Q6UXU0 137 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms